RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 PPLO60437 1756 aa21.85■■□□□ 1.09
NCK1-202ENST00000460960 FNBP4Q8N3X1 1017 aaPredicted RBP21.85■■□□□ 1.09
NCK1-202ENST00000460960 SLC4A1APQ9BWU0 796 aaKnown RBP21.85■■□□□ 1.09
NCK1-202ENST00000460960 COL22A1Q8NFW1 1626 aaPredicted RBP21.84■■□□□ 1.09
NCK1-202ENST00000460960 ATRNO75882 1429 aa21.84■■□□□ 1.09
NCK1-202ENST00000460960 NUTM2FA1L443 756 aa21.84■■□□□ 1.09
NCK1-202ENST00000460960 FOXO3O43524 673 aa21.82■■□□□ 1.08
NCK1-202ENST00000460960 FOXD1Q16676 465 aa21.82■■□□□ 1.08
NCK1-202ENST00000460960 STK26Q9P289 416 aa21.82■■□□□ 1.08
NCK1-202ENST00000460960 ZRANB1Q9UGI0 708 aa21.81■■□□□ 1.08
NCK1-202ENST00000460960 RAB3GAP2Q9H2M9 1393 aa21.81■■□□□ 1.08
NCK1-202ENST00000460960 MYOM2P54296 1465 aa21.81■■□□□ 1.08
NCK1-202ENST00000460960 CDC42BPGQ6DT37 1551 aa21.81■■□□□ 1.08
NCK1-202ENST00000460960 PRAG1Q86YV5 1406 aa21.8■■□□□ 1.08
NCK1-202ENST00000460960 MARF1Q9Y4F3 1742 aaKnown RBP21.8■■□□□ 1.08
NCK1-202ENST00000460960 PXDNQ92626 1479 aa21.78■■□□□ 1.08
NCK1-202ENST00000460960 TRIM26Q12899 539 aaPredicted RBP21.77■■□□□ 1.08
NCK1-202ENST00000460960 RGL3Q3MIN7 710 aa21.77■■□□□ 1.08
NCK1-202ENST00000460960 WAPLQ7Z5K2 1190 aa21.77■■□□□ 1.08
NCK1-202ENST00000460960 BCL9LQ86UU0 1499 aa21.77■■□□□ 1.07
NCK1-202ENST00000460960 LRPPRCP42704 1394 aaKnown RBP21.76■■□□□ 1.07
NCK1-202ENST00000460960 GJD4Q96KN9 370 aaPredicted RBP21.75■■□□□ 1.07
NCK1-202ENST00000460960 ADGRF5Q8IZF2 1346 aa21.75■■□□□ 1.07
NCK1-202ENST00000460960 PLEKHG5O94827 1062 aa21.73■■□□□ 1.07
NCK1-202ENST00000460960 TMEM132EQ6IEE7 984 aa21.72■■□□□ 1.07
NCK1-202ENST00000460960 CCDC125Q86Z20 511 aa21.72■■□□□ 1.07
NCK1-202ENST00000460960 CCDC144AA2RUR9 1427 aa21.72■■□□□ 1.07
NCK1-202ENST00000460960 HAP1P54257 671 aaPredicted RBP21.71■■□□□ 1.07
NCK1-202ENST00000460960 SRCAPQ6ZRS2 3230 aa21.71■■□□□ 1.07
NCK1-202ENST00000460960 PLEKHH1Q9ULM0 1364 aa21.71■■□□□ 1.07
NCK1-202ENST00000460960 UNC5CLQ8IV45 518 aa21.69■■□□□ 1.06
NCK1-202ENST00000460960 EP400Q96L91 3159 aa21.69■■□□□ 1.06
NCK1-202ENST00000460960 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.69■■□□□ 1.06
NCK1-202ENST00000460960 RALGAPBQ86X10 1494 aa21.68■■□□□ 1.06
NCK1-202ENST00000460960 FMN2Q9NZ56 1722 aa21.67■■□□□ 1.06
NCK1-202ENST00000460960 TECPR2O15040 1411 aa21.67■■□□□ 1.06
NCK1-202ENST00000460960 SPATA31A3Q5VYP0 1347 aa21.67■■□□□ 1.06
NCK1-202ENST00000460960 KNDC1Q76NI1 1749 aa21.66■■□□□ 1.06
NCK1-202ENST00000460960 KIF1AQ12756 1690 aa21.66■■□□□ 1.06
NCK1-202ENST00000460960 ANKRD30BQ9BXX2 1392 aa21.66■■□□□ 1.06
NCK1-202ENST00000460960 KRT28Q7Z3Y7 464 aa21.66■■□□□ 1.06
NCK1-202ENST00000460960 GLI3P10071 1580 aa21.65■■□□□ 1.06
NCK1-202ENST00000460960 CCDC9Q9Y3X0 531 aaKnown RBP21.65■■□□□ 1.06
NCK1-202ENST00000460960 IFT172Q9UG01 1749 aa21.65■■□□□ 1.06
NCK1-202ENST00000460960 USP32Q8NFA0 1604 aa21.65■■□□□ 1.06
NCK1-202ENST00000460960 ABCC11Q96J66 1382 aa21.64■■□□□ 1.06
NCK1-202ENST00000460960 SF3B2Q13435 895 aaKnown RBP21.64■■□□□ 1.05
NCK1-202ENST00000460960 LMOD2Q6P5Q4 547 aa21.64■■□□□ 1.05
NCK1-202ENST00000460960 SLIT2O94813 1529 aa21.64■■□□□ 1.05
NCK1-202ENST00000460960 MPHOSPH9Q99550 1183 aa21.63■■□□□ 1.05
NCK1-202ENST00000460960 BRWD3Q6RI45 1802 aa21.63■■□□□ 1.05
NCK1-202ENST00000460960 BLMP54132 1417 aaPredicted RBP21.63■■□□□ 1.05
NCK1-202ENST00000460960 SPATA31E1Q6ZUB1 1445 aa21.63■■□□□ 1.05
NCK1-202ENST00000460960 YTHDC2Q9H6S0 1430 aaKnown RBP21.63■■□□□ 1.05
NCK1-202ENST00000460960 RGPD8O14715 1765 aaPredicted RBP21.62■■□□□ 1.05
NCK1-202ENST00000460960 DEFB132Q7Z7B7 95 aa21.62■■□□□ 1.05
NCK1-202ENST00000460960 CABLES1Q8TDN4 633 aa21.62■■□□□ 1.05
NCK1-202ENST00000460960 PHF8Q9UPP1 1060 aa21.61■■□□□ 1.05
NCK1-202ENST00000460960 PIK3C2GO75747 1445 aa21.61■■□□□ 1.05
NCK1-202ENST00000460960 A0A0G2JS52 829 aa21.6■■□□□ 1.05
NCK1-202ENST00000460960 MYT1Q01538 1121 aa21.6■■□□□ 1.05
NCK1-202ENST00000460960 PSME1Q06323 249 aa21.6■■□□□ 1.05
NCK1-202ENST00000460960 SAFB2Q14151 953 aaKnown RBP eCLIP21.6■■□□□ 1.052e-6■■□□□ 12.2
NCK1-202ENST00000460960 SEPT12Q8IYM1 358 aa21.6■■□□□ 1.05
NCK1-202ENST00000460960 TNS3Q68CZ2 1445 aa21.6■■□□□ 1.05
NCK1-202ENST00000460960 HRCP23327 699 aa21.59■■□□□ 1.05
NCK1-202ENST00000460960 PCGF6Q9BYE7 350 aa21.58■■□□□ 1.05
NCK1-202ENST00000460960 PLCH1Q4KWH8 1693 aa21.58■■□□□ 1.05
NCK1-202ENST00000460960 VPS72Q15906 364 aa21.56■■□□□ 1.04
NCK1-202ENST00000460960 DHX57Q6P158 1386 aaKnown RBP21.54■■□□□ 1.04
NCK1-202ENST00000460960 NWD2Q9ULI1 1742 aa21.54■■□□□ 1.04
NCK1-202ENST00000460960 ABCA3Q99758 1704 aa21.53■■□□□ 1.04
NCK1-202ENST00000460960 CFAP70Q5T0N1 1121 aa21.53■■□□□ 1.04
NCK1-202ENST00000460960 KRT27Q7Z3Y8 459 aa21.53■■□□□ 1.04
NCK1-202ENST00000460960 PMFBP1Q8TBY8 1022 aa21.53■■□□□ 1.04
NCK1-202ENST00000460960 PRAM1Q96QH2 718 aa21.53■■□□□ 1.04
NCK1-202ENST00000460960 ARHGEF10O15013 1369 aa21.52■■□□□ 1.04
NCK1-202ENST00000460960 C14orf93Q9H972 538 aaKnown RBP21.52■■□□□ 1.04
NCK1-202ENST00000460960 POGKQ9P215 609 aa21.52■■□□□ 1.04
NCK1-202ENST00000460960 NRXN1Q9ULB1 1477 aa21.52■■□□□ 1.03
NCK1-202ENST00000460960 SBNO1A3KN83 1393 aa21.51■■□□□ 1.03
NCK1-202ENST00000460960 SIRT1Q96EB6 747 aa21.51■■□□□ 1.03
NCK1-202ENST00000460960 ACIN1Q9UKV3 1341 aaKnown RBP21.49■■□□□ 1.03
NCK1-202ENST00000460960 PSDA5PKW4 1024 aaPredicted RBP21.48■■□□□ 1.03
NCK1-202ENST00000460960 FAM83GA6ND36 823 aa21.48■■□□□ 1.03
NCK1-202ENST00000460960 FAM98CQ17RN3 349 aaKnown RBP21.48■■□□□ 1.03
NCK1-202ENST00000460960 BAG6P46379 1132 aa21.47■■□□□ 1.03
NCK1-202ENST00000460960 ONECUT3O60422 494 aaPredicted RBP21.45■■□□□ 1.02
NCK1-202ENST00000460960 HIRIP3Q9BW71 556 aaPredicted RBP21.45■■□□□ 1.02
NCK1-202ENST00000460960 BTG4Q9NY30 223 aa21.45■■□□□ 1.02
NCK1-202ENST00000460960 NRAPQ86VF7 1730 aa21.43■■□□□ 1.02
NCK1-202ENST00000460960 ANKARQ7Z5J8 1434 aa21.43■■□□□ 1.02
NCK1-202ENST00000460960 LRP5O75197 1615 aa21.42■■□□□ 1.02
NCK1-202ENST00000460960 GPRASP1Q5JY77 1395 aa21.42■■□□□ 1.02
NCK1-202ENST00000460960 MINK1Q8N4C8 1332 aaPredicted RBP21.42■■□□□ 1.02
NCK1-202ENST00000460960 TRAK1Q9UPV9 953 aa21.42■■□□□ 1.02
NCK1-202ENST00000460960 FAM182BQ5T319 152 aa21.41■■□□□ 1.02
NCK1-202ENST00000460960 TRPM3Q9HCF6 1732 aaPredicted RBP21.41■■□□□ 1.02
NCK1-202ENST00000460960 DLC1Q96QB1 1528 aa21.4■■□□□ 1.02
NCK1-202ENST00000460960 PAK3O75914 559 aaPredicted RBP21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms