RNA–Protein interactions for RNA: ENST00000460791.1

NXF3-203, Transcript of nuclear RNA export factor 3, humanhuman

TSL 2

Gene NXF3, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-203ENST00000460791 ADGRB1O14514 1584 aa8.39□□□□□ -1.07
NXF3-203ENST00000460791 MSH6P52701 1360 aa8.39□□□□□ -1.07
NXF3-203ENST00000460791 MINK1Q8N4C8 1332 aaPredicted RBP8.39□□□□□ -1.07
NXF3-203ENST00000460791 NPM3O75607 178 aaKnown RBP8.39□□□□□ -1.07
NXF3-203ENST00000460791 ATF3P18847 181 aa8.39□□□□□ -1.07
NXF3-203ENST00000460791 HIRIP3Q9BW71 556 aaPredicted RBP8.39□□□□□ -1.07
NXF3-203ENST00000460791 C19orf44Q9H6X5 657 aa8.39□□□□□ -1.07
NXF3-203ENST00000460791 ROCK2O75116 1388 aaKnown RBP8.38□□□□□ -1.07
NXF3-203ENST00000460791 ARHGEF28Q8N1W1 1705 aaKnown RBP8.38□□□□□ -1.07
NXF3-203ENST00000460791 IQSEC2Q5JU85 1478 aa8.38□□□□□ -1.07
NXF3-203ENST00000460791 CARD11Q9BXL7 1154 aa8.37□□□□□ -1.07
NXF3-203ENST00000460791 SLAIN2Q9P270 581 aa8.37□□□□□ -1.07
NXF3-203ENST00000460791 SIRT1Q96EB6 747 aa8.36□□□□□ -1.07
NXF3-203ENST00000460791 TECPR2O15040 1411 aa8.36□□□□□ -1.07
NXF3-203ENST00000460791 PTCH1Q13635 1447 aa8.36□□□□□ -1.07
NXF3-203ENST00000460791 ADGRL3Q9HAR2 1447 aa8.36□□□□□ -1.07
NXF3-203ENST00000460791 CADPS2Q86UW7 1296 aa8.35□□□□□ -1.07
NXF3-203ENST00000460791 DDX17Q92841 729 aaKnown RBP8.35□□□□□ -1.07
NXF3-203ENST00000460791 NCOA3Q9Y6Q9 1424 aa8.35□□□□□ -1.07
NXF3-203ENST00000460791 QRICH2Q9H0J4 1663 aa8.34□□□□□ -1.07
NXF3-203ENST00000460791 ROBO1Q9Y6N7 1651 aa8.34□□□□□ -1.07
NXF3-203ENST00000460791 HSPA1LP34931 641 aa8.34□□□□□ -1.07
NXF3-203ENST00000460791 ORAI2Q96SN7 254 aa8.34□□□□□ -1.07
NXF3-203ENST00000460791 TIMELESSQ9UNS1 1208 aa8.34□□□□□ -1.07
NXF3-203ENST00000460791 FAM135BQ49AJ0 1406 aa8.34□□□□□ -1.07
NXF3-203ENST00000460791 DLC1Q96QB1 1528 aa8.34□□□□□ -1.08
NXF3-203ENST00000460791 CENPJQ9HC77 1338 aaPredicted RBP8.33□□□□□ -1.08
NXF3-203ENST00000460791 RALGAPBQ86X10 1494 aa8.33□□□□□ -1.08
NXF3-203ENST00000460791 ESCO1Q5FWF5 840 aa8.33□□□□□ -1.08
NXF3-203ENST00000460791 FMN2Q9NZ56 1722 aa8.33□□□□□ -1.08
NXF3-203ENST00000460791 MST1RQ04912 1400 aa8.32□□□□□ -1.08
NXF3-203ENST00000460791 BRINP3Q76B58 766 aa8.32□□□□□ -1.08
NXF3-203ENST00000460791 CDK19Q9BWU1 502 aa8.32□□□□□ -1.08
NXF3-203ENST00000460791 PHLPP1O60346 1717 aa8.32□□□□□ -1.08
NXF3-203ENST00000460791 ST20-MTHFSA0A0A6YYL1 179 aa8.31□□□□□ -1.08
NXF3-203ENST00000460791 WASLO00401 505 aaPredicted RBP8.31□□□□□ -1.08
NXF3-203ENST00000460791 XPCQ01831 940 aaPredicted RBP8.31□□□□□ -1.08
NXF3-203ENST00000460791 PMFBP1Q8TBY8 1022 aa8.31□□□□□ -1.08
NXF3-203ENST00000460791 CABP2Q9NPB3 220 aa8.31□□□□□ -1.08
NXF3-203ENST00000460791 GPRASP1Q5JY77 1395 aa8.31□□□□□ -1.08
NXF3-203ENST00000460791 C1orf167Q5SNV9 1468 aa8.31□□□□□ -1.08
NXF3-203ENST00000460791 PRR36Q9H6K5 1346 aa8.3□□□□□ -1.08
NXF3-203ENST00000460791 SRPK2P78362 688 aaKnown RBP8.3□□□□□ -1.08
NXF3-203ENST00000460791 NUDT16Q96DE0 195 aaKnown RBP8.3□□□□□ -1.08
NXF3-203ENST00000460791 CDC42BPGQ6DT37 1551 aa8.3□□□□□ -1.08
NXF3-203ENST00000460791 DCCP43146 1447 aa8.29□□□□□ -1.08
NXF3-203ENST00000460791 USP32Q8NFA0 1604 aa8.29□□□□□ -1.08
NXF3-203ENST00000460791 FOXO3O43524 673 aa8.29□□□□□ -1.08
NXF3-203ENST00000460791 SLC24A1O60721 1099 aa8.29□□□□□ -1.08
NXF3-203ENST00000460791 PLEKHG5O94827 1062 aa8.29□□□□□ -1.08
NXF3-203ENST00000460791 PHF8Q9UPP1 1060 aa8.29□□□□□ -1.08
NXF3-203ENST00000460791 EIF3AQ14152 1382 aaKnown RBP8.28□□□□□ -1.08
NXF3-203ENST00000460791 USP47Q96K76 1375 aa8.28□□□□□ -1.08
NXF3-203ENST00000460791 HSPA5P11021 654 aaKnown RBP8.28□□□□□ -1.08
NXF3-203ENST00000460791 EVC2Q86UK5 1308 aa8.28□□□□□ -1.08
NXF3-203ENST00000460791 ADGRB2O60241 1585 aa8.27□□□□□ -1.09
NXF3-203ENST00000460791 NGDNQ8NEJ9 315 aaKnown RBP8.27□□□□□ -1.09
NXF3-203ENST00000460791 POLR3GLQ9BT43 218 aa8.27□□□□□ -1.09
NXF3-203ENST00000460791 TULP4Q9NRJ4 1543 aa8.27□□□□□ -1.09
NXF3-203ENST00000460791 ITSN1Q15811 1721 aa8.26□□□□□ -1.09
NXF3-203ENST00000460791 NHSL1Q5SYE7 1610 aa8.26□□□□□ -1.09
NXF3-203ENST00000460791 EIF4G2P78344 907 aaKnown RBP eCLIP8.26□□□□□ -1.09
NXF3-203ENST00000460791 PSME1Q06323 249 aa8.26□□□□□ -1.09
NXF3-203ENST00000460791 LMOD2Q6P5Q4 547 aa8.26□□□□□ -1.09
NXF3-203ENST00000460791 KRT28Q7Z3Y7 464 aa8.26□□□□□ -1.09
NXF3-203ENST00000460791 TESK2Q96S53 571 aa8.26□□□□□ -1.09
NXF3-203ENST00000460791 NUTM2BA6NNL0 878 aaPredicted RBP8.25□□□□□ -1.09
NXF3-203ENST00000460791 NUTM2EB1AL46 878 aaPredicted RBP8.25□□□□□ -1.09
NXF3-203ENST00000460791 NUTM2AQ8IVF1 878 aaPredicted RBP8.25□□□□□ -1.09
NXF3-203ENST00000460791 TMC1Q8TDI8 760 aa8.25□□□□□ -1.09
NXF3-203ENST00000460791 CABP1Q9NZU7 370 aa8.25□□□□□ -1.09
NXF3-203ENST00000460791 CCDC61Q9Y6R9 512 aa8.25□□□□□ -1.09
NXF3-203ENST00000460791 ACEP12821 1306 aa8.25□□□□□ -1.09
NXF3-203ENST00000460791 ANKARQ7Z5J8 1434 aa8.24□□□□□ -1.09
NXF3-203ENST00000460791 PAK3O75914 559 aaPredicted RBP8.24□□□□□ -1.09
NXF3-203ENST00000460791 MAPK8IP2Q13387 824 aaPredicted RBP8.24□□□□□ -1.09
NXF3-203ENST00000460791 COL16A1Q07092 1604 aaPredicted RBP8.24□□□□□ -1.09
NXF3-203ENST00000460791 AHDC1Q5TGY3 1603 aaPredicted RBP8.24□□□□□ -1.09
NXF3-203ENST00000460791 ATP7BP35670 1465 aa8.24□□□□□ -1.09
NXF3-203ENST00000460791 NPHP3Q7Z494 1330 aa8.24□□□□□ -1.09
NXF3-203ENST00000460791 KIF1AQ12756 1690 aa8.24□□□□□ -1.09
NXF3-203ENST00000460791 DISP3Q9P2K9 1392 aa8.23□□□□□ -1.09
NXF3-203ENST00000460791 PPIP5K1Q6PFW1 1433 aa8.23□□□□□ -1.09
NXF3-203ENST00000460791 NUTM2GQ5VZR2 741 aa8.23□□□□□ -1.09
NXF3-203ENST00000460791 SLC12A5Q9H2X9 1139 aa8.23□□□□□ -1.09
NXF3-203ENST00000460791 TOPAZ1Q8N9V7 1692 aa8.23□□□□□ -1.09
NXF3-203ENST00000460791 SOS2Q07890 1332 aaPredicted RBP8.23□□□□□ -1.09
NXF3-203ENST00000460791 PLEKHG3A1L390 1219 aa8.22□□□□□ -1.09
NXF3-203ENST00000460791 C11orf95C9JLR9 678 aaPredicted RBP8.22□□□□□ -1.09
NXF3-203ENST00000460791 TMF1P82094 1093 aa8.22□□□□□ -1.09
NXF3-203ENST00000460791 LRRC59Q96AG4 307 aaKnown RBP8.22□□□□□ -1.09
NXF3-203ENST00000460791 RNF216Q9NWF9 866 aaPredicted RBP8.22□□□□□ -1.09
NXF3-203ENST00000460791 AKAP12Q02952 1782 aa8.22□□□□□ -1.09
NXF3-203ENST00000460791 PXDNQ92626 1479 aa8.21□□□□□ -1.09
NXF3-203ENST00000460791 CABLES1Q8TDN4 633 aa8.21□□□□□ -1.1
NXF3-203ENST00000460791 JCADQ9P266 1359 aa8.21□□□□□ -1.1
NXF3-203ENST00000460791 SBNO2Q9Y2G9 1366 aa8.21□□□□□ -1.1
NXF3-203ENST00000460791 TRPM3Q9HCF6 1732 aaPredicted RBP8.2□□□□□ -1.1
NXF3-203ENST00000460791 ADAMTS2O95450 1211 aa8.2□□□□□ -1.1
NXF3-203ENST00000460791 SPATA31A3Q5VYP0 1347 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms