RNA–Protein interactions for RNA: ENST00000460721.1

LDOC1-202, Transcript of LDOC1, regulator of NFKB signaling, humanhuman

TSL 1 (best)

Gene LDOC1, Length 784 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDOC1-202ENST00000460721 CDC42BPGQ6DT37 1551 aa22.38■■□□□ 1.17
LDOC1-202ENST00000460721 DLC1Q96QB1 1528 aa22.38■■□□□ 1.17
LDOC1-202ENST00000460721 C1orf167Q5SNV9 1468 aa22.38■■□□□ 1.17
LDOC1-202ENST00000460721 PHF23Q9BUL5 403 aaPredicted RBP22.36■■□□□ 1.17
LDOC1-202ENST00000460721 NHSL1Q5SYE7 1610 aa22.35■■□□□ 1.17
LDOC1-202ENST00000460721 KIAA1210Q9ULL0 1709 aa22.35■■□□□ 1.17
LDOC1-202ENST00000460721 SIN3AQ96ST3 1273 aa22.35■■□□□ 1.17
LDOC1-202ENST00000460721 L3MBTL2Q969R5 705 aa22.3■■□□□ 1.16
LDOC1-202ENST00000460721 FMN2Q9NZ56 1722 aa22.29■■□□□ 1.16
LDOC1-202ENST00000460721 JCADQ9P266 1359 aa22.29■■□□□ 1.16
LDOC1-202ENST00000460721 PRAM1Q96QH2 718 aa22.28■■□□□ 1.16
LDOC1-202ENST00000460721 ORAI2Q96SN7 254 aa22.28■■□□□ 1.16
LDOC1-202ENST00000460721 TRAK1Q9UPV9 953 aa22.27■■□□□ 1.16
LDOC1-202ENST00000460721 SHPRHQ149N8 1683 aa22.26■■□□□ 1.15
LDOC1-202ENST00000460721 ARHGEF28Q8N1W1 1705 aaKnown RBP22.26■■□□□ 1.15
LDOC1-202ENST00000460721 ADGRB2O60241 1585 aa22.25■■□□□ 1.15
LDOC1-202ENST00000460721 NEUROD1Q13562 356 aa22.24■■□□□ 1.15
LDOC1-202ENST00000460721 NBPF1Q3BBV0 1214 aa22.23■■□□□ 1.15
LDOC1-202ENST00000460721 DDX17Q92841 729 aaKnown RBP22.23■■□□□ 1.15
LDOC1-202ENST00000460721 SOS2Q07890 1332 aaPredicted RBP22.23■■□□□ 1.15
LDOC1-202ENST00000460721 POGKQ9P215 609 aa22.22■■□□□ 1.15
LDOC1-202ENST00000460721 RGS17Q9UGC6 210 aaPredicted RBP22.22■■□□□ 1.15
LDOC1-202ENST00000460721 RGPD8O14715 1765 aaPredicted RBP22.21■■□□□ 1.15
LDOC1-202ENST00000460721 LRRC59Q96AG4 307 aaKnown RBP22.21■■□□□ 1.15
LDOC1-202ENST00000460721 SPATA31A6Q5VVP1 1343 aa22.2■■□□□ 1.14
LDOC1-202ENST00000460721 SAFB2Q14151 953 aaKnown RBP eCLIP22.19■■□□□ 1.14
LDOC1-202ENST00000460721 ESCO1Q5FWF5 840 aa22.19■■□□□ 1.14
LDOC1-202ENST00000460721 TRPM1Q7Z4N2 1603 aa22.18■■□□□ 1.14
LDOC1-202ENST00000460721 USP32Q8NFA0 1604 aa22.18■■□□□ 1.14
LDOC1-202ENST00000460721 KIF1AQ12756 1690 aa22.17■■□□□ 1.14
LDOC1-202ENST00000460721 NUTM2FA1L443 756 aa22.16■■□□□ 1.14
LDOC1-202ENST00000460721 LRP6O75581 1613 aa22.16■■□□□ 1.14
LDOC1-202ENST00000460721 PXDNQ92626 1479 aa22.15■■□□□ 1.14
LDOC1-202ENST00000460721 ANKARQ7Z5J8 1434 aa22.15■■□□□ 1.14
LDOC1-202ENST00000460721 NPHP3Q7Z494 1330 aa22.15■■□□□ 1.14
LDOC1-202ENST00000460721 PNPLA6Q8IY17 1366 aa22.14■■□□□ 1.14
LDOC1-202ENST00000460721 MINK1Q8N4C8 1332 aaPredicted RBP22.14■■□□□ 1.14
LDOC1-202ENST00000460721 WASLO00401 505 aaPredicted RBP22.13■■□□□ 1.13
LDOC1-202ENST00000460721 NBPF8Q3BBV2 869 aa22.13■■□□□ 1.13
LDOC1-202ENST00000460721 FOXO3O43524 673 aa22.12■■□□□ 1.13
LDOC1-202ENST00000460721 HIRIP3Q9BW71 556 aaPredicted RBP22.12■■□□□ 1.13
LDOC1-202ENST00000460721 TULP4Q9NRJ4 1543 aa22.11■■□□□ 1.13
LDOC1-202ENST00000460721 PHF8Q9UPP1 1060 aa22.11■■□□□ 1.13
LDOC1-202ENST00000460721 PRR36Q9H6K5 1346 aa22.1■■□□□ 1.13
LDOC1-202ENST00000460721 EIF3AQ14152 1382 aaKnown RBP22.1■■□□□ 1.13
LDOC1-202ENST00000460721 GPRASP1Q5JY77 1395 aa22.1■■□□□ 1.13
LDOC1-202ENST00000460721 COL22A1Q8NFW1 1626 aaPredicted RBP22.09■■□□□ 1.13
LDOC1-202ENST00000460721 PCGF6Q9BYE7 350 aa22.09■■□□□ 1.13
LDOC1-202ENST00000460721 TONSLQ96HA7 1378 aa22.08■■□□□ 1.12
LDOC1-202ENST00000460721 CENPJQ9HC77 1338 aaPredicted RBP22.06■■□□□ 1.12
LDOC1-202ENST00000460721 ATP7BP35670 1465 aa22.05■■□□□ 1.12
LDOC1-202ENST00000460721 POTEAQ6S8J7 498 aa22.05■■□□□ 1.12
LDOC1-202ENST00000460721 ROCK2O75116 1388 aaKnown RBP22.04■■□□□ 1.12
LDOC1-202ENST00000460721 XPCQ01831 940 aaPredicted RBP22.04■■□□□ 1.12
LDOC1-202ENST00000460721 KRT28Q7Z3Y7 464 aa22.04■■□□□ 1.12
LDOC1-202ENST00000460721 SPATA31A3Q5VYP0 1347 aa22.04■■□□□ 1.12
LDOC1-202ENST00000460721 CDK19Q9BWU1 502 aa22.03■■□□□ 1.12
LDOC1-202ENST00000460721 QRICH2Q9H0J4 1663 aa22.03■■□□□ 1.12
LDOC1-202ENST00000460721 CLSPNQ9HAW4 1339 aa22.03■■□□□ 1.12
LDOC1-202ENST00000460721 ITSN1Q15811 1721 aa22.03■■□□□ 1.12
LDOC1-202ENST00000460721 NUDT16Q96DE0 195 aaKnown RBP22.02■■□□□ 1.12
LDOC1-202ENST00000460721 RALGAPBQ86X10 1494 aa22.02■■□□□ 1.12
LDOC1-202ENST00000460721 TOPAZ1Q8N9V7 1692 aa22.01■■□□□ 1.11
LDOC1-202ENST00000460721 SBNO1A3KN83 1393 aa22.01■■□□□ 1.11
LDOC1-202ENST00000460721 NUTM2BA6NNL0 878 aaPredicted RBP22.01■■□□□ 1.11
LDOC1-202ENST00000460721 NUTM2EB1AL46 878 aaPredicted RBP22.01■■□□□ 1.11
LDOC1-202ENST00000460721 NUTM2AQ8IVF1 878 aaPredicted RBP22.01■■□□□ 1.11
LDOC1-202ENST00000460721 PMFBP1Q8TBY8 1022 aa22.01■■□□□ 1.11
LDOC1-202ENST00000460721 TRPM3Q9HCF6 1732 aaPredicted RBP22■■□□□ 1.11
LDOC1-202ENST00000460721 PSME1Q06323 249 aa21.99■■□□□ 1.11
LDOC1-202ENST00000460721 MEX3CQ5U5Q3 659 aaKnown RBP21.98■■□□□ 1.11
LDOC1-202ENST00000460721 TNS3Q68CZ2 1445 aa21.97■■□□□ 1.11
LDOC1-202ENST00000460721 CCDC61Q9Y6R9 512 aa21.97■■□□□ 1.11
LDOC1-202ENST00000460721 PLEKHG3A1L390 1219 aa21.96■■□□□ 1.11
LDOC1-202ENST00000460721 MARF1Q9Y4F3 1742 aaKnown RBP21.95■■□□□ 1.1
LDOC1-202ENST00000460721 ZNF772Q68DY9 489 aaPredicted RBP21.95■■□□□ 1.1
LDOC1-202ENST00000460721 TIMELESSQ9UNS1 1208 aa21.95■■□□□ 1.1
LDOC1-202ENST00000460721 ALS2Q96Q42 1657 aa21.95■■□□□ 1.1
LDOC1-202ENST00000460721 CARD11Q9BXL7 1154 aa21.94■■□□□ 1.1
LDOC1-202ENST00000460721 POLR3AO14802 1390 aaPredicted RBP21.94■■□□□ 1.1
LDOC1-202ENST00000460721 SBNO2Q9Y2G9 1366 aa21.93■■□□□ 1.1
LDOC1-202ENST00000460721 AFF2P51816 1311 aa21.92■■□□□ 1.1
LDOC1-202ENST00000460721 ARHGEF10O15013 1369 aa21.91■■□□□ 1.1
LDOC1-202ENST00000460721 NGDNQ8NEJ9 315 aaKnown RBP21.91■■□□□ 1.1
LDOC1-202ENST00000460721 CABP2Q9NPB3 220 aa21.91■■□□□ 1.1
LDOC1-202ENST00000460721 ADAMTS2O95450 1211 aa21.9■■□□□ 1.1
LDOC1-202ENST00000460721 FNBP4Q8N3X1 1017 aaPredicted RBP21.9■■□□□ 1.1
LDOC1-202ENST00000460721 ABCA3Q99758 1704 aa21.89■■□□□ 1.1
LDOC1-202ENST00000460721 ACEP12821 1306 aa21.89■■□□□ 1.1
LDOC1-202ENST00000460721 EVC2Q86UK5 1308 aa21.89■■□□□ 1.1
LDOC1-202ENST00000460721 SRPK2P78362 688 aaKnown RBP21.89■■□□□ 1.09
LDOC1-202ENST00000460721 C8orf37Q96NL8 207 aa21.89■■□□□ 1.09
LDOC1-202ENST00000460721 PPIP5K1Q6PFW1 1433 aa21.88■■□□□ 1.09
LDOC1-202ENST00000460721 NGLY1Q96IV0 654 aa21.87■■□□□ 1.09
LDOC1-202ENST00000460721 CRYBG1Q9Y4K1 1723 aa21.86■■□□□ 1.09
LDOC1-202ENST00000460721 CABLES1Q8TDN4 633 aa21.83■■□□□ 1.09
LDOC1-202ENST00000460721 CABP1Q9NZU7 370 aa21.83■■□□□ 1.09
LDOC1-202ENST00000460721 BCL9LQ86UU0 1499 aa21.83■■□□□ 1.08
LDOC1-202ENST00000460721 SLIT2O94813 1529 aa21.82■■□□□ 1.08
LDOC1-202ENST00000460721 BRD4O60885 1362 aaPredicted RBP21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms