RNA–Protein interactions for RNA: ENST00000460677.5

PCYT1A-212, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 1 (best)

Gene PCYT1A, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-212ENST00000460677 PRKRIP1Q9H875 184 aaPredicted RBP21.74■■□□□ 1.07
PCYT1A-212ENST00000460677 PIK3R4Q99570 1358 aa21.74■■□□□ 1.07
PCYT1A-212ENST00000460677 PER1O15534 1290 aaPredicted RBP21.74■■□□□ 1.07
PCYT1A-212ENST00000460677 AMOTL2Q9Y2J4 779 aa21.72■■□□□ 1.07
PCYT1A-212ENST00000460677 NPHP4O75161 1426 aaPredicted RBP21.71■■□□□ 1.07
PCYT1A-212ENST00000460677 ROBO2Q9HCK4 1378 aa21.71■■□□□ 1.07
PCYT1A-212ENST00000460677 CABP2Q9NPB3 220 aa21.69■■□□□ 1.06
PCYT1A-212ENST00000460677 PTCH1Q13635 1447 aa21.69■■□□□ 1.06
PCYT1A-212ENST00000460677 SRPK2P78362 688 aaKnown RBP21.68■■□□□ 1.06
PCYT1A-212ENST00000460677 ATAD2Q6PL18 1390 aa21.68■■□□□ 1.06
PCYT1A-212ENST00000460677 NCKAP5LQ9HCH0 1330 aa21.67■■□□□ 1.06
PCYT1A-212ENST00000460677 XRN1Q8IZH2 1706 aaKnown RBP21.67■■□□□ 1.06
PCYT1A-212ENST00000460677 CDK19Q9BWU1 502 aa21.67■■□□□ 1.06
PCYT1A-212ENST00000460677 KTN1Q86UP2 1357 aaKnown RBP21.67■■□□□ 1.06
PCYT1A-212ENST00000460677 NINLQ9Y2I6 1382 aa21.66■■□□□ 1.06
PCYT1A-212ENST00000460677 TMC1Q8TDI8 760 aa21.65■■□□□ 1.06
PCYT1A-212ENST00000460677 KNSTRNQ9Y448 316 aa21.65■■□□□ 1.06
PCYT1A-212ENST00000460677 SLC12A5Q9H2X9 1139 aa21.64■■□□□ 1.06
PCYT1A-212ENST00000460677 WASLO00401 505 aaPredicted RBP21.63■■□□□ 1.05
PCYT1A-212ENST00000460677 RALBP1Q15311 655 aa21.63■■□□□ 1.05
PCYT1A-212ENST00000460677 ADGRB2O60241 1585 aa21.62■■□□□ 1.05
PCYT1A-212ENST00000460677 CHD2O14647 1828 aaKnown RBP21.62■■□□□ 1.05
PCYT1A-212ENST00000460677 KCNA6P17658 529 aa21.61■■□□□ 1.05
PCYT1A-212ENST00000460677 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.61■■□□□ 1.05
PCYT1A-212ENST00000460677 CNGB1Q14028 1251 aaPredicted RBP21.61■■□□□ 1.05
PCYT1A-212ENST00000460677 LMTK3Q96Q04 1460 aa21.6■■□□□ 1.05
PCYT1A-212ENST00000460677 PARD3Q8TEW0 1356 aa21.6■■□□□ 1.05
PCYT1A-212ENST00000460677 NPC1L1Q9UHC9 1359 aa21.6■■□□□ 1.05
PCYT1A-212ENST00000460677 CARD14Q9BXL6 1004 aa21.6■■□□□ 1.05
PCYT1A-212ENST00000460677 ANKRD36BQ8N2N9 1353 aa21.59■■□□□ 1.05
PCYT1A-212ENST00000460677 AMER1Q5JTC6 1135 aaPredicted RBP21.59■■□□□ 1.05
PCYT1A-212ENST00000460677 CC2D1BQ5T0F9 858 aaKnown RBP21.58■■□□□ 1.04
PCYT1A-212ENST00000460677 HSPA2P54652 639 aa21.57■■□□□ 1.04
PCYT1A-212ENST00000460677 MYBBP1AQ9BQG0 1328 aaKnown RBP21.55■■□□□ 1.04
PCYT1A-212ENST00000460677 NSD3Q9BZ95 1437 aa21.55■■□□□ 1.04
PCYT1A-212ENST00000460677 TERF2IPQ9NYB0 399 aa21.54■■□□□ 1.04
PCYT1A-212ENST00000460677 NWD1Q149M9 1564 aa21.54■■□□□ 1.04
PCYT1A-212ENST00000460677 NUDT16Q96DE0 195 aaKnown RBP21.53■■□□□ 1.04
PCYT1A-212ENST00000460677 YTHDC1Q96MU7 727 aaKnown RBP21.53■■□□□ 1.04
PCYT1A-212ENST00000460677 CABP1Q9NZU7 370 aa21.53■■□□□ 1.04
PCYT1A-212ENST00000460677 CCDC184Q52MB2 194 aa21.52■■□□□ 1.04
PCYT1A-212ENST00000460677 A0A1W2PP64 1363 aa21.52■■□□□ 1.04
PCYT1A-212ENST00000460677 CD163L1Q9NR16 1453 aa21.52■■□□□ 1.04
PCYT1A-212ENST00000460677 USP32Q8NFA0 1604 aa21.52■■□□□ 1.04
PCYT1A-212ENST00000460677 ATP7BP35670 1465 aa21.51■■□□□ 1.03
PCYT1A-212ENST00000460677 HDGFL2Q7Z4V5 671 aaPredicted RBP21.51■■□□□ 1.03
PCYT1A-212ENST00000460677 MRS2Q9HD23 443 aa21.51■■□□□ 1.03
PCYT1A-212ENST00000460677 CCDC61Q9Y6R9 512 aa21.51■■□□□ 1.03
PCYT1A-212ENST00000460677 PPIP5K1Q6PFW1 1433 aa21.5■■□□□ 1.03
PCYT1A-212ENST00000460677 BRD4O60885 1362 aaPredicted RBP21.49■■□□□ 1.03
PCYT1A-212ENST00000460677 CGNL1Q0VF96 1302 aa21.49■■□□□ 1.03
PCYT1A-212ENST00000460677 PRR36Q9H6K5 1346 aa21.49■■□□□ 1.03
PCYT1A-212ENST00000460677 NLRP13Q86W25 1043 aa21.48■■□□□ 1.03
PCYT1A-212ENST00000460677 STRCQ7RTU9 1775 aa21.46■■□□□ 1.03
PCYT1A-212ENST00000460677 NKTRP30414 1462 aaKnown RBP21.46■■□□□ 1.03
PCYT1A-212ENST00000460677 NSD2O96028 1365 aa21.45■■□□□ 1.02
PCYT1A-212ENST00000460677 TOPAZ1Q8N9V7 1692 aa21.45■■□□□ 1.02
PCYT1A-212ENST00000460677 CPSF1Q10570 1443 aaKnown RBP21.45■■□□□ 1.02
PCYT1A-212ENST00000460677 CDC42BPGQ6DT37 1551 aa21.45■■□□□ 1.02
PCYT1A-212ENST00000460677 NALCNQ8IZF0 1738 aa21.44■■□□□ 1.02
PCYT1A-212ENST00000460677 ADGRL3Q9HAR2 1447 aa21.44■■□□□ 1.02
PCYT1A-212ENST00000460677 ANKARQ7Z5J8 1434 aa21.43■■□□□ 1.02
PCYT1A-212ENST00000460677 PLEKHG3A1L390 1219 aa21.43■■□□□ 1.02
PCYT1A-212ENST00000460677 PPP2R1AP30153 589 aa21.42■■□□□ 1.02
PCYT1A-212ENST00000460677 PROSER2Q86WR7 435 aaPredicted RBP21.42■■□□□ 1.02
PCYT1A-212ENST00000460677 FMN2Q9NZ56 1722 aa21.41■■□□□ 1.02
PCYT1A-212ENST00000460677 NUTM2FA1L443 756 aa21.41■■□□□ 1.02
PCYT1A-212ENST00000460677 ZNF692Q9BU19 519 aaPredicted RBP21.41■■□□□ 1.02
PCYT1A-212ENST00000460677 MORC1Q86VD1 984 aa21.4■■□□□ 1.02
PCYT1A-212ENST00000460677 ITSN1Q15811 1721 aa21.4■■□□□ 1.02
PCYT1A-212ENST00000460677 EDC4Q6P2E9 1401 aaKnown RBP21.4■■□□□ 1.02
PCYT1A-212ENST00000460677 RBM33Q96EV2 1170 aaKnown RBP21.39■■□□□ 1.02
PCYT1A-212ENST00000460677 AKAP12Q02952 1782 aa21.39■■□□□ 1.01
PCYT1A-212ENST00000460677 CENPBP07199 599 aaPredicted RBP21.38■■□□□ 1.01
PCYT1A-212ENST00000460677 FYB1O15117 783 aa21.37■■□□□ 1.01
PCYT1A-212ENST00000460677 FAM9BQ8IZU0 186 aa21.37■■□□□ 1.01
PCYT1A-212ENST00000460677 PNISRQ8TF01 805 aaKnown RBP21.37■■□□□ 1.01
PCYT1A-212ENST00000460677 MON2Q7Z3U7 1717 aa21.37■■□□□ 1.01
PCYT1A-212ENST00000460677 STRCP1A6NGW2 1772 aa21.37■■□□□ 1.01
PCYT1A-212ENST00000460677 C14orf37Q86TY3 774 aa21.36■■□□□ 1.01
PCYT1A-212ENST00000460677 ACEP12821 1306 aa21.36■■□□□ 1.01
PCYT1A-212ENST00000460677 NCOA3Q9Y6Q9 1424 aa21.36■■□□□ 1.01
PCYT1A-212ENST00000460677 RGPD8O14715 1765 aaPredicted RBP21.34■■□□□ 1.01
PCYT1A-212ENST00000460677 KIF20BQ96Q89 1820 aa21.34■■□□□ 1.01
PCYT1A-212ENST00000460677 GGNBP2Q9H3C7 697 aa21.34■■□□□ 1.01
PCYT1A-212ENST00000460677 ANKRD26Q9UPS8 1709 aa21.34■■□□□ 1.01
PCYT1A-212ENST00000460677 POLR3AO14802 1390 aaPredicted RBP21.33■■□□□ 1.01
PCYT1A-212ENST00000460677 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.33■■□□□ 1
PCYT1A-212ENST00000460677 C19orf44Q9H6X5 657 aa21.32■■□□□ 1
PCYT1A-212ENST00000460677 DMRT2Q9Y5R5 561 aa21.32■■□□□ 1
PCYT1A-212ENST00000460677 TMEM94Q12767 1356 aa21.32■■□□□ 1
PCYT1A-212ENST00000460677 USP6P35125 1406 aa21.31■■□□□ 1
PCYT1A-212ENST00000460677 PMFBP1Q8TBY8 1022 aa21.31■■□□□ 1
PCYT1A-212ENST00000460677 NGDNQ8NEJ9 315 aaKnown RBP21.3■■□□□ 1
PCYT1A-212ENST00000460677 NRKQ7Z2Y5 1582 aa21.3■■□□□ 1
PCYT1A-212ENST00000460677 TNNT2P45379 298 aaPredicted RBP21.29■■□□□ 1
PCYT1A-212ENST00000460677 TTC21BQ7Z4L5 1316 aa21.28■■□□□ 1
PCYT1A-212ENST00000460677 DCCP43146 1447 aa21.27■■□□□ 1
PCYT1A-212ENST00000460677 SSH2Q76I76 1423 aa21.27■■□□□ 1
PCYT1A-212ENST00000460677 NME9Q86XW9 330 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms