RNA–Protein interactions for RNA: ENST00000460584.1

LSG1-204, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 668 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-204ENST00000460584 LRPPRCP42704 1394 aaKnown RBP17.09■□□□□ 0.33
LSG1-204ENST00000460584 SIRT1Q96EB6 747 aa17.08■□□□□ 0.32
LSG1-204ENST00000460584 PIK3C2GO75747 1445 aa17.07■□□□□ 0.32
LSG1-204ENST00000460584 FOXD1Q16676 465 aa17.07■□□□□ 0.32
LSG1-204ENST00000460584 RBM6P78332 1123 aaKnown RBP17.06■□□□□ 0.32
LSG1-204ENST00000460584 IFT172Q9UG01 1749 aa17.06■□□□□ 0.32
LSG1-204ENST00000460584 COL22A1Q8NFW1 1626 aaPredicted RBP17.06■□□□□ 0.32
LSG1-204ENST00000460584 NPHP3Q7Z494 1330 aa17.05■□□□□ 0.32
LSG1-204ENST00000460584 FNBP4Q8N3X1 1017 aaPredicted RBP17.05■□□□□ 0.32
LSG1-204ENST00000460584 NRXN1Q9ULB1 1477 aa17.05■□□□□ 0.32
LSG1-204ENST00000460584 C8orf37Q96NL8 207 aa17.04■□□□□ 0.32
LSG1-204ENST00000460584 QTRT2Q9H974 415 aaKnown RBP17.04■□□□□ 0.32
LSG1-204ENST00000460584 MYOM2P54296 1465 aa17.04■□□□□ 0.32
LSG1-204ENST00000460584 PXDNQ92626 1479 aa17.04■□□□□ 0.32
LSG1-204ENST00000460584 KNDC1Q76NI1 1749 aa17.03■□□□□ 0.32
LSG1-204ENST00000460584 C14orf93Q9H972 538 aaKnown RBP17.02■□□□□ 0.32
LSG1-204ENST00000460584 RGS12O14924 1447 aa17.02■□□□□ 0.31
LSG1-204ENST00000460584 RGL3Q3MIN7 710 aa17.01■□□□□ 0.31
LSG1-204ENST00000460584 NGLY1Q96IV0 654 aa17■□□□□ 0.31
LSG1-204ENST00000460584 YTHDC2Q9H6S0 1430 aaKnown RBP17■□□□□ 0.31
LSG1-204ENST00000460584 ESCO1Q5FWF5 840 aa16.99■□□□□ 0.31
LSG1-204ENST00000460584 WAPLQ7Z5K2 1190 aa16.99■□□□□ 0.31
LSG1-204ENST00000460584 ATRNO75882 1429 aa16.98■□□□□ 0.31
LSG1-204ENST00000460584 ADAMTS2O95450 1211 aa16.98■□□□□ 0.31
LSG1-204ENST00000460584 TRPC5Q9UL62 973 aaPredicted RBP16.98■□□□□ 0.31
LSG1-204ENST00000460584 PLEKHH1Q9ULM0 1364 aa16.98■□□□□ 0.31
LSG1-204ENST00000460584 TMEM132EQ6IEE7 984 aa16.97■□□□□ 0.31
LSG1-204ENST00000460584 FOXO3O43524 673 aa16.96■□□□□ 0.31
LSG1-204ENST00000460584 STK26Q9P289 416 aa16.96■□□□□ 0.31
LSG1-204ENST00000460584 USP21Q9UK80 565 aa16.96■□□□□ 0.31
LSG1-204ENST00000460584 BCL9LQ86UU0 1499 aa16.95■□□□□ 0.3
LSG1-204ENST00000460584 FMN2Q9NZ56 1722 aa16.95■□□□□ 0.3
LSG1-204ENST00000460584 SPATA31A3Q5VYP0 1347 aa16.95■□□□□ 0.3
LSG1-204ENST00000460584 KIF1AQ12756 1690 aa16.94■□□□□ 0.3
LSG1-204ENST00000460584 DHX57Q6P158 1386 aaKnown RBP16.93■□□□□ 0.3
LSG1-204ENST00000460584 DLC1Q96QB1 1528 aa16.93■□□□□ 0.3
LSG1-204ENST00000460584 HRCP23327 699 aa16.92■□□□□ 0.3
LSG1-204ENST00000460584 ATAD2Q6PL18 1390 aa16.91■□□□□ 0.3
LSG1-204ENST00000460584 CFAP70Q5T0N1 1121 aa16.91■□□□□ 0.3
LSG1-204ENST00000460584 STAC3Q96MF2 364 aa16.91■□□□□ 0.3
LSG1-204ENST00000460584 SLIT2O94813 1529 aa16.91■□□□□ 0.3
LSG1-204ENST00000460584 RAB3GAP2Q9H2M9 1393 aa16.89■□□□□ 0.3
LSG1-204ENST00000460584 MARF1Q9Y4F3 1742 aaKnown RBP16.89■□□□□ 0.29
LSG1-204ENST00000460584 ADGRB1O14514 1584 aa16.89■□□□□ 0.29
LSG1-204ENST00000460584 SBNO1A3KN83 1393 aa16.89■□□□□ 0.29
LSG1-204ENST00000460584 ANKARQ7Z5J8 1434 aa16.88■□□□□ 0.29
LSG1-204ENST00000460584 XPCQ01831 940 aaPredicted RBP16.88■□□□□ 0.29
LSG1-204ENST00000460584 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.87■□□□□ 0.29
LSG1-204ENST00000460584 ADGRB2O60241 1585 aa16.87■□□□□ 0.29
LSG1-204ENST00000460584 KRT28Q7Z3Y7 464 aa16.87■□□□□ 0.29
LSG1-204ENST00000460584 GJD4Q96KN9 370 aaPredicted RBP16.87■□□□□ 0.29
LSG1-204ENST00000460584 PHF8Q9UPP1 1060 aa16.87■□□□□ 0.29
LSG1-204ENST00000460584 TNS3Q68CZ2 1445 aa16.87■□□□□ 0.29
LSG1-204ENST00000460584 NUTM2FA1L443 756 aa16.86■□□□□ 0.29
LSG1-204ENST00000460584 PSME1Q06323 249 aa16.86■□□□□ 0.29
LSG1-204ENST00000460584 CCDC125Q86Z20 511 aa16.86■□□□□ 0.29
LSG1-204ENST00000460584 UNC5CLQ8IV45 518 aa16.86■□□□□ 0.29
LSG1-204ENST00000460584 PRAM1Q96QH2 718 aa16.86■□□□□ 0.29
LSG1-204ENST00000460584 ARHGEF10O15013 1369 aa16.83■□□□□ 0.28
LSG1-204ENST00000460584 USP32Q8NFA0 1604 aa16.83■□□□□ 0.28
LSG1-204ENST00000460584 ONECUT3O60422 494 aaPredicted RBP16.82■□□□□ 0.28
LSG1-204ENST00000460584 RALGAPBQ86X10 1494 aa16.81■□□□□ 0.28
LSG1-204ENST00000460584 EIF3AQ14152 1382 aaKnown RBP16.81■□□□□ 0.28
LSG1-204ENST00000460584 GLI3P10071 1580 aa16.81■□□□□ 0.28
LSG1-204ENST00000460584 VPS72Q15906 364 aa16.79■□□□□ 0.28
LSG1-204ENST00000460584 POGKQ9P215 609 aa16.79■□□□□ 0.28
LSG1-204ENST00000460584 RGPD8O14715 1765 aaPredicted RBP16.78■□□□□ 0.28
LSG1-204ENST00000460584 TULP4Q9NRJ4 1543 aa16.77■□□□□ 0.28
LSG1-204ENST00000460584 NWD2Q9ULI1 1742 aa16.77■□□□□ 0.28
LSG1-204ENST00000460584 WASLO00401 505 aaPredicted RBP16.76■□□□□ 0.27
LSG1-204ENST00000460584 DCAF11Q8TEB1 546 aa16.76■□□□□ 0.27
LSG1-204ENST00000460584 TRPM3Q9HCF6 1732 aaPredicted RBP16.76■□□□□ 0.27
LSG1-204ENST00000460584 PRR36Q9H6K5 1346 aa16.75■□□□□ 0.27
LSG1-204ENST00000460584 SAFB2Q14151 953 aaKnown RBP eCLIP16.75■□□□□ 0.27
LSG1-204ENST00000460584 TRAK1Q9UPV9 953 aa16.75■□□□□ 0.27
LSG1-204ENST00000460584 ABCA3Q99758 1704 aa16.75■□□□□ 0.27
LSG1-204ENST00000460584 BLMP54132 1417 aaPredicted RBP16.74■□□□□ 0.27
LSG1-204ENST00000460584 CABLES1Q8TDN4 633 aa16.74■□□□□ 0.27
LSG1-204ENST00000460584 ALS2Q96Q42 1657 aa16.73■□□□□ 0.27
LSG1-204ENST00000460584 FAM83GA6ND36 823 aa16.73■□□□□ 0.27
LSG1-204ENST00000460584 PMFBP1Q8TBY8 1022 aa16.73■□□□□ 0.27
LSG1-204ENST00000460584 EP400Q96L91 3159 aa16.73■□□□□ 0.27
LSG1-204ENST00000460584 GPRASP1Q5JY77 1395 aa16.73■□□□□ 0.27
LSG1-204ENST00000460584 SEPT12Q8IYM1 358 aa16.72■□□□□ 0.27
LSG1-204ENST00000460584 ZRANB1Q9UGI0 708 aa16.71■□□□□ 0.27
LSG1-204ENST00000460584 KDM2AQ9Y2K7 1162 aa16.71■□□□□ 0.27
LSG1-204ENST00000460584 PLCH1Q4KWH8 1693 aa16.71■□□□□ 0.27
LSG1-204ENST00000460584 MINK1Q8N4C8 1332 aaPredicted RBP16.7■□□□□ 0.26
LSG1-204ENST00000460584 HAP1P54257 671 aaPredicted RBP16.7■□□□□ 0.26
LSG1-204ENST00000460584 HIRIP3Q9BW71 556 aaPredicted RBP16.7■□□□□ 0.26
LSG1-204ENST00000460584 ATP7BP35670 1465 aa16.69■□□□□ 0.26
LSG1-204ENST00000460584 NRAPQ86VF7 1730 aa16.67■□□□□ 0.26
LSG1-204ENST00000460584 ARHGEF28Q8N1W1 1705 aaKnown RBP16.67■□□□□ 0.26
LSG1-204ENST00000460584 POLR3AO14802 1390 aaPredicted RBP16.67■□□□□ 0.26
LSG1-204ENST00000460584 KIAA1210Q9ULL0 1709 aa16.67■□□□□ 0.26
LSG1-204ENST00000460584 CRYBG1Q9Y4K1 1723 aa16.67■□□□□ 0.26
LSG1-204ENST00000460584 COL14A1Q05707 1796 aaKnown RBP16.66■□□□□ 0.26
LSG1-204ENST00000460584 BRWD3Q6RI45 1802 aa16.66■□□□□ 0.26
LSG1-204ENST00000460584 LMOD2Q6P5Q4 547 aa16.66■□□□□ 0.26
LSG1-204ENST00000460584 KRT27Q7Z3Y8 459 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms