RNA–Protein interactions for RNA: ENST00000460480.1

SLC6A1-203, Transcript of solute carrier family 6 member 1, humanhuman

TSL 4

Gene SLC6A1, Length 457 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-203ENST00000460480 TECPR2O15040 1411 aa21.94■■□□□ 1.1
SLC6A1-203ENST00000460480 LRPPRCP42704 1394 aaKnown RBP21.93■■□□□ 1.1
SLC6A1-203ENST00000460480 TMEM132EQ6IEE7 984 aa21.93■■□□□ 1.1
SLC6A1-203ENST00000460480 C8orf37Q96NL8 207 aa21.93■■□□□ 1.1
SLC6A1-203ENST00000460480 QTRT2Q9H974 415 aaKnown RBP21.93■■□□□ 1.1
SLC6A1-203ENST00000460480 STK26Q9P289 416 aa21.92■■□□□ 1.1
SLC6A1-203ENST00000460480 ACIN1Q9UKV3 1341 aaKnown RBP21.9■■□□□ 1.1
SLC6A1-203ENST00000460480 IFT172Q9UG01 1749 aa21.9■■□□□ 1.1
SLC6A1-203ENST00000460480 PIK3C2GO75747 1445 aa21.89■■□□□ 1.1
SLC6A1-203ENST00000460480 ADAMTS2O95450 1211 aa21.89■■□□□ 1.09
SLC6A1-203ENST00000460480 RBM6P78332 1123 aaKnown RBP21.89■■□□□ 1.09
SLC6A1-203ENST00000460480 ESCO1Q5FWF5 840 aa21.89■■□□□ 1.09
SLC6A1-203ENST00000460480 SIRT1Q96EB6 747 aa21.89■■□□□ 1.09
SLC6A1-203ENST00000460480 NGLY1Q96IV0 654 aa21.89■■□□□ 1.09
SLC6A1-203ENST00000460480 C14orf93Q9H972 538 aaKnown RBP21.89■■□□□ 1.09
SLC6A1-203ENST00000460480 CDC42BPGQ6DT37 1551 aa21.89■■□□□ 1.09
SLC6A1-203ENST00000460480 FNBP4Q8N3X1 1017 aaPredicted RBP21.88■■□□□ 1.09
SLC6A1-203ENST00000460480 PLEKHH1Q9ULM0 1364 aa21.87■■□□□ 1.09
SLC6A1-203ENST00000460480 FOXO3O43524 673 aa21.87■■□□□ 1.09
SLC6A1-203ENST00000460480 NPHP3Q7Z494 1330 aa21.86■■□□□ 1.09
SLC6A1-203ENST00000460480 PXDNQ92626 1479 aa21.85■■□□□ 1.09
SLC6A1-203ENST00000460480 YTHDC2Q9H6S0 1430 aaKnown RBP21.84■■□□□ 1.09
SLC6A1-203ENST00000460480 NRXN1Q9ULB1 1477 aa21.83■■□□□ 1.09
SLC6A1-203ENST00000460480 COL22A1Q8NFW1 1626 aaPredicted RBP21.83■■□□□ 1.08
SLC6A1-203ENST00000460480 MYOM2P54296 1465 aa21.83■■□□□ 1.08
SLC6A1-203ENST00000460480 RGS12O14924 1447 aa21.82■■□□□ 1.08
SLC6A1-203ENST00000460480 NUTM2FA1L443 756 aa21.82■■□□□ 1.08
SLC6A1-203ENST00000460480 CFAP70Q5T0N1 1121 aa21.82■■□□□ 1.08
SLC6A1-203ENST00000460480 XPCQ01831 940 aaPredicted RBP21.81■■□□□ 1.08
SLC6A1-203ENST00000460480 USP21Q9UK80 565 aa21.81■■□□□ 1.08
SLC6A1-203ENST00000460480 KNDC1Q76NI1 1749 aa21.8■■□□□ 1.08
SLC6A1-203ENST00000460480 RAB3GAP2Q9H2M9 1393 aa21.78■■□□□ 1.08
SLC6A1-203ENST00000460480 TRPC5Q9UL62 973 aaPredicted RBP21.78■■□□□ 1.08
SLC6A1-203ENST00000460480 ATRNO75882 1429 aa21.77■■□□□ 1.08
SLC6A1-203ENST00000460480 SPATA31A3Q5VYP0 1347 aa21.77■■□□□ 1.07
SLC6A1-203ENST00000460480 BCL9LQ86UU0 1499 aa21.77■■□□□ 1.07
SLC6A1-203ENST00000460480 DHX57Q6P158 1386 aaKnown RBP21.76■■□□□ 1.07
SLC6A1-203ENST00000460480 EP400Q96L91 3159 aa21.76■■□□□ 1.07
SLC6A1-203ENST00000460480 FMN2Q9NZ56 1722 aa21.75■■□□□ 1.07
SLC6A1-203ENST00000460480 SRCAPQ6ZRS2 3230 aa21.74■■□□□ 1.07
SLC6A1-203ENST00000460480 KRT28Q7Z3Y7 464 aa21.74■■□□□ 1.07
SLC6A1-203ENST00000460480 PRAM1Q96QH2 718 aa21.72■■□□□ 1.07
SLC6A1-203ENST00000460480 PHF8Q9UPP1 1060 aa21.71■■□□□ 1.07
SLC6A1-203ENST00000460480 HRCP23327 699 aa21.7■■□□□ 1.06
SLC6A1-203ENST00000460480 GJD4Q96KN9 370 aaPredicted RBP21.68■■□□□ 1.06
SLC6A1-203ENST00000460480 RGPD8O14715 1765 aaPredicted RBP21.67■■□□□ 1.06
SLC6A1-203ENST00000460480 MARF1Q9Y4F3 1742 aaKnown RBP21.67■■□□□ 1.06
SLC6A1-203ENST00000460480 KIF1AQ12756 1690 aa21.67■■□□□ 1.06
SLC6A1-203ENST00000460480 ADGRB1O14514 1584 aa21.67■■□□□ 1.06
SLC6A1-203ENST00000460480 SLIT2O94813 1529 aa21.66■■□□□ 1.06
SLC6A1-203ENST00000460480 DLC1Q96QB1 1528 aa21.66■■□□□ 1.06
SLC6A1-203ENST00000460480 SAFB2Q14151 953 aaKnown RBP eCLIP21.66■■□□□ 1.06
SLC6A1-203ENST00000460480 ATAD2Q6PL18 1390 aa21.65■■□□□ 1.06
SLC6A1-203ENST00000460480 PSME1Q06323 249 aa21.65■■□□□ 1.06
SLC6A1-203ENST00000460480 UNC5CLQ8IV45 518 aa21.65■■□□□ 1.06
SLC6A1-203ENST00000460480 STAC3Q96MF2 364 aa21.65■■□□□ 1.06
SLC6A1-203ENST00000460480 SBNO1A3KN83 1393 aa21.64■■□□□ 1.06
SLC6A1-203ENST00000460480 DCAF11Q8TEB1 546 aa21.63■■□□□ 1.05
SLC6A1-203ENST00000460480 POGKQ9P215 609 aa21.63■■□□□ 1.05
SLC6A1-203ENST00000460480 TRAK1Q9UPV9 953 aa21.63■■□□□ 1.05
SLC6A1-203ENST00000460480 CABLES1Q8TDN4 633 aa21.62■■□□□ 1.05
SLC6A1-203ENST00000460480 KDM2AQ9Y2K7 1162 aa21.62■■□□□ 1.05
SLC6A1-203ENST00000460480 TNS3Q68CZ2 1445 aa21.62■■□□□ 1.05
SLC6A1-203ENST00000460480 ANKARQ7Z5J8 1434 aa21.62■■□□□ 1.05
SLC6A1-203ENST00000460480 USP32Q8NFA0 1604 aa21.6■■□□□ 1.05
SLC6A1-203ENST00000460480 PMFBP1Q8TBY8 1022 aa21.6■■□□□ 1.05
SLC6A1-203ENST00000460480 PRR36Q9H6K5 1346 aa21.59■■□□□ 1.05
SLC6A1-203ENST00000460480 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.58■■□□□ 1.05
SLC6A1-203ENST00000460480 ADGRB2O60241 1585 aa21.58■■□□□ 1.05
SLC6A1-203ENST00000460480 ONECUT3O60422 494 aaPredicted RBP21.58■■□□□ 1.05
SLC6A1-203ENST00000460480 HIRIP3Q9BW71 556 aaPredicted RBP21.58■■□□□ 1.05
SLC6A1-203ENST00000460480 RALGAPBQ86X10 1494 aa21.58■■□□□ 1.04
SLC6A1-203ENST00000460480 FAM83GA6ND36 823 aa21.57■■□□□ 1.04
SLC6A1-203ENST00000460480 CCDC125Q86Z20 511 aa21.57■■□□□ 1.04
SLC6A1-203ENST00000460480 GLI3P10071 1580 aa21.57■■□□□ 1.04
SLC6A1-203ENST00000460480 WASLO00401 505 aaPredicted RBP21.56■■□□□ 1.04
SLC6A1-203ENST00000460480 MINK1Q8N4C8 1332 aaPredicted RBP21.55■■□□□ 1.04
SLC6A1-203ENST00000460480 VPS72Q15906 364 aa21.55■■□□□ 1.04
SLC6A1-203ENST00000460480 ARHGEF10O15013 1369 aa21.55■■□□□ 1.04
SLC6A1-203ENST00000460480 LMOD2Q6P5Q4 547 aa21.52■■□□□ 1.04
SLC6A1-203ENST00000460480 TRPM3Q9HCF6 1732 aaPredicted RBP21.5■■□□□ 1.03
SLC6A1-203ENST00000460480 HAP1P54257 671 aaPredicted RBP21.5■■□□□ 1.03
SLC6A1-203ENST00000460480 SEPT12Q8IYM1 358 aa21.5■■□□□ 1.03
SLC6A1-203ENST00000460480 TULP4Q9NRJ4 1543 aa21.5■■□□□ 1.03
SLC6A1-203ENST00000460480 PLEKHG5O94827 1062 aa21.49■■□□□ 1.03
SLC6A1-203ENST00000460480 EIF3AQ14152 1382 aaKnown RBP21.48■■□□□ 1.03
SLC6A1-203ENST00000460480 ABCA3Q99758 1704 aa21.48■■□□□ 1.03
SLC6A1-203ENST00000460480 NWD2Q9ULI1 1742 aa21.48■■□□□ 1.03
SLC6A1-203ENST00000460480 GPRASP1Q5JY77 1395 aa21.48■■□□□ 1.03
SLC6A1-203ENST00000460480 ALS2Q96Q42 1657 aa21.47■■□□□ 1.03
SLC6A1-203ENST00000460480 NUDT16Q96DE0 195 aaKnown RBP21.46■■□□□ 1.03
SLC6A1-203ENST00000460480 BRWD3Q6RI45 1802 aa21.45■■□□□ 1.03
SLC6A1-203ENST00000460480 PLCH1Q4KWH8 1693 aa21.45■■□□□ 1.02
SLC6A1-203ENST00000460480 NGDNQ8NEJ9 315 aaKnown RBP21.44■■□□□ 1.02
SLC6A1-203ENST00000460480 CDK19Q9BWU1 502 aa21.43■■□□□ 1.02
SLC6A1-203ENST00000460480 BTG4Q9NY30 223 aa21.43■■□□□ 1.02
SLC6A1-203ENST00000460480 ZRANB1Q9UGI0 708 aa21.43■■□□□ 1.02
SLC6A1-203ENST00000460480 BLMP54132 1417 aaPredicted RBP21.43■■□□□ 1.02
SLC6A1-203ENST00000460480 NBPF1Q3BBV0 1214 aa21.42■■□□□ 1.02
SLC6A1-203ENST00000460480 ARHGEF28Q8N1W1 1705 aaKnown RBP21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms