RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 C14orf93Q9H972 538 aaKnown RBP30.69■■■□□ 2.5
SRM-202ENST00000459997 MEX3CQ5U5Q3 659 aaKnown RBP30.67■■■□□ 2.5
SRM-202ENST00000459997 POTEAQ6S8J7 498 aa30.67■■■□□ 2.5
SRM-202ENST00000459997 LRRC59Q96AG4 307 aaKnown RBP30.67■■■□□ 2.5
SRM-202ENST00000459997 ORAI2Q96SN7 254 aa30.67■■■□□ 2.5
SRM-202ENST00000459997 CFAP70Q5T0N1 1121 aa30.66■■■□□ 2.5
SRM-202ENST00000459997 PLEKHH1Q9ULM0 1364 aa30.66■■■□□ 2.5
SRM-202ENST00000459997 NUTM2BA6NNL0 878 aaPredicted RBP30.63■■■□□ 2.49
SRM-202ENST00000459997 NUTM2EB1AL46 878 aaPredicted RBP30.63■■■□□ 2.49
SRM-202ENST00000459997 NUTM2AQ8IVF1 878 aaPredicted RBP30.63■■■□□ 2.49
SRM-202ENST00000459997 DHX57Q6P158 1386 aaKnown RBP30.62■■■□□ 2.49
SRM-202ENST00000459997 PNPLA6Q8IY17 1366 aa30.6■■■□□ 2.49
SRM-202ENST00000459997 ESCO1Q5FWF5 840 aa30.58■■■□□ 2.49
SRM-202ENST00000459997 SOS2Q07890 1332 aaPredicted RBP30.57■■■□□ 2.48
SRM-202ENST00000459997 DCAF11Q8TEB1 546 aa30.57■■■□□ 2.48
SRM-202ENST00000459997 SIRT1Q96EB6 747 aa30.57■■■□□ 2.48
SRM-202ENST00000459997 KDM2AQ9Y2K7 1162 aa30.57■■■□□ 2.48
SRM-202ENST00000459997 FMN2Q9NZ56 1722 aa30.56■■■□□ 2.48
SRM-202ENST00000459997 NUTM2FA1L443 756 aa30.55■■■□□ 2.48
SRM-202ENST00000459997 ADGRB1O14514 1584 aa30.53■■■□□ 2.48
SRM-202ENST00000459997 ZNF772Q68DY9 489 aaPredicted RBP30.52■■■□□ 2.48
SRM-202ENST00000459997 NPHP3Q7Z494 1330 aa30.51■■■□□ 2.48
SRM-202ENST00000459997 PRAM1Q96QH2 718 aa30.51■■■□□ 2.47
SRM-202ENST00000459997 DLC1Q96QB1 1528 aa30.51■■■□□ 2.47
SRM-202ENST00000459997 STAC3Q96MF2 364 aa30.5■■■□□ 2.47
SRM-202ENST00000459997 SAFB2Q14151 953 aaKnown RBP eCLIP30.49■■■□□ 2.47
SRM-202ENST00000459997 PXDNQ92626 1479 aa30.48■■■□□ 2.47
SRM-202ENST00000459997 FOXO3O43524 673 aa30.47■■■□□ 2.47
SRM-202ENST00000459997 POGKQ9P215 609 aa30.46■■■□□ 2.47
SRM-202ENST00000459997 KIF1AQ12756 1690 aa30.46■■■□□ 2.47
SRM-202ENST00000459997 XPCQ01831 940 aaPredicted RBP30.45■■■□□ 2.47
SRM-202ENST00000459997 AFF2P51816 1311 aa30.45■■■□□ 2.46
SRM-202ENST00000459997 COL22A1Q8NFW1 1626 aaPredicted RBP30.44■■■□□ 2.46
SRM-202ENST00000459997 C8orf37Q96NL8 207 aa30.44■■■□□ 2.46
SRM-202ENST00000459997 TRAK1Q9UPV9 953 aa30.44■■■□□ 2.46
SRM-202ENST00000459997 RGPD8O14715 1765 aaPredicted RBP30.42■■■□□ 2.46
SRM-202ENST00000459997 ADAMTS2O95450 1211 aa30.41■■■□□ 2.46
SRM-202ENST00000459997 ADGRB2O60241 1585 aa30.4■■■□□ 2.46
SRM-202ENST00000459997 NGLY1Q96IV0 654 aa30.35■■■□□ 2.45
SRM-202ENST00000459997 PHF8Q9UPP1 1060 aa30.35■■■□□ 2.45
SRM-202ENST00000459997 USP32Q8NFA0 1604 aa30.34■■■□□ 2.45
SRM-202ENST00000459997 RXRBP28702 533 aa30.34■■■□□ 2.45
SRM-202ENST00000459997 HIRIP3Q9BW71 556 aaPredicted RBP30.34■■■□□ 2.45
SRM-202ENST00000459997 ARHGEF28Q8N1W1 1705 aaKnown RBP30.33■■■□□ 2.45
SRM-202ENST00000459997 MINK1Q8N4C8 1332 aaPredicted RBP30.33■■■□□ 2.45
SRM-202ENST00000459997 ANKARQ7Z5J8 1434 aa30.32■■■□□ 2.44
SRM-202ENST00000459997 KRT28Q7Z3Y7 464 aa30.31■■■□□ 2.44
SRM-202ENST00000459997 KIAA1210Q9ULL0 1709 aa30.3■■■□□ 2.44
SRM-202ENST00000459997 SPATA31A3Q5VYP0 1347 aa30.29■■■□□ 2.44
SRM-202ENST00000459997 QTRT2Q9H974 415 aaKnown RBP30.28■■■□□ 2.44
SRM-202ENST00000459997 MARF1Q9Y4F3 1742 aaKnown RBP30.27■■■□□ 2.44
SRM-202ENST00000459997 CDK12Q9NYV4 1490 aaPredicted RBP30.27■■■□□ 2.44
SRM-202ENST00000459997 EIF3AQ14152 1382 aaKnown RBP30.27■■■□□ 2.44
SRM-202ENST00000459997 TULP4Q9NRJ4 1543 aa30.26■■■□□ 2.43
SRM-202ENST00000459997 PSME1Q06323 249 aa30.25■■■□□ 2.43
SRM-202ENST00000459997 TNS3Q68CZ2 1445 aa30.24■■■□□ 2.43
SRM-202ENST00000459997 WASLO00401 505 aaPredicted RBP30.24■■■□□ 2.43
SRM-202ENST00000459997 PMFBP1Q8TBY8 1022 aa30.24■■■□□ 2.43
SRM-202ENST00000459997 USP21Q9UK80 565 aa30.24■■■□□ 2.43
SRM-202ENST00000459997 RBM6P78332 1123 aaKnown RBP30.22■■■□□ 2.43
SRM-202ENST00000459997 FNBP4Q8N3X1 1017 aaPredicted RBP30.22■■■□□ 2.43
SRM-202ENST00000459997 PRR36Q9H6K5 1346 aa30.22■■■□□ 2.43
SRM-202ENST00000459997 SBNO1A3KN83 1393 aa30.2■■■□□ 2.43
SRM-202ENST00000459997 NBPF1Q3BBV0 1214 aa30.19■■■□□ 2.42
SRM-202ENST00000459997 RGS12O14924 1447 aa30.18■■■□□ 2.42
SRM-202ENST00000459997 LMOD2Q6P5Q4 547 aa30.17■■■□□ 2.42
SRM-202ENST00000459997 SIN3AQ96ST3 1273 aa30.17■■■□□ 2.42
SRM-202ENST00000459997 TRPC5Q9UL62 973 aaPredicted RBP30.17■■■□□ 2.42
SRM-202ENST00000459997 L3MBTL2Q969R5 705 aa30.16■■■□□ 2.42
SRM-202ENST00000459997 ARHGEF10O15013 1369 aa30.15■■■□□ 2.42
SRM-202ENST00000459997 ITSN1Q15811 1721 aa30.15■■■□□ 2.42
SRM-202ENST00000459997 TRPM3Q9HCF6 1732 aaPredicted RBP30.15■■■□□ 2.42
SRM-202ENST00000459997 ATRNO75882 1429 aa30.14■■■□□ 2.42
SRM-202ENST00000459997 PLEKHG5O94827 1062 aa30.14■■■□□ 2.42
SRM-202ENST00000459997 HAP1P54257 671 aaPredicted RBP30.14■■■□□ 2.42
SRM-202ENST00000459997 GPRASP1Q5JY77 1395 aa30.14■■■□□ 2.41
SRM-202ENST00000459997 ABCA3Q99758 1704 aa30.13■■■□□ 2.41
SRM-202ENST00000459997 ATP7BP35670 1465 aa30.13■■■□□ 2.41
SRM-202ENST00000459997 BCL9LQ86UU0 1499 aa30.13■■■□□ 2.41
SRM-202ENST00000459997 NEUROD1Q13562 356 aa30.13■■■□□ 2.41
SRM-202ENST00000459997 CABLES1Q8TDN4 633 aa30.12■■■□□ 2.41
SRM-202ENST00000459997 NGDNQ8NEJ9 315 aaKnown RBP30.1■■■□□ 2.41
SRM-202ENST00000459997 NUDT16Q96DE0 195 aaKnown RBP30.1■■■□□ 2.41
SRM-202ENST00000459997 CDK19Q9BWU1 502 aa30.1■■■□□ 2.41
SRM-202ENST00000459997 ALS2Q96Q42 1657 aa30.09■■■□□ 2.41
SRM-202ENST00000459997 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.09■■■□□ 2.41
SRM-202ENST00000459997 UPF1Q92900 1129 aaKnown RBP eCLIP30.08■■■□□ 2.41
SRM-202ENST00000459997 SLIT2O94813 1529 aa30.07■■■□□ 2.4
SRM-202ENST00000459997 TOPAZ1Q8N9V7 1692 aa30.06■■■□□ 2.4
SRM-202ENST00000459997 TRPM1Q7Z4N2 1603 aa30.06■■■□□ 2.4
SRM-202ENST00000459997 CENPJQ9HC77 1338 aaPredicted RBP30.04■■■□□ 2.4
SRM-202ENST00000459997 QRICH2Q9H0J4 1663 aa30.04■■■□□ 2.4
SRM-202ENST00000459997 UNC5CLQ8IV45 518 aa30.03■■■□□ 2.4
SRM-202ENST00000459997 PLCH1Q4KWH8 1693 aa30.03■■■□□ 2.4
SRM-202ENST00000459997 PAK3O75914 559 aaPredicted RBP30.01■■■□□ 2.39
SRM-202ENST00000459997 GJD4Q96KN9 370 aaPredicted RBP30■■■□□ 2.39
SRM-202ENST00000459997 CCDC61Q9Y6R9 512 aa29.99■■■□□ 2.39
SRM-202ENST00000459997 NWD2Q9ULI1 1742 aa29.99■■■□□ 2.39
SRM-202ENST00000459997 SRPK2P78362 688 aaKnown RBP29.97■■■□□ 2.39
SRM-202ENST00000459997 TRIM26Q12899 539 aaPredicted RBP29.97■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms