RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 WAPLQ7Z5K2 1190 aa22.85■■□□□ 1.25
SDF4-204ENST00000459994 ORAI2Q96SN7 254 aa22.84■■□□□ 1.25
SDF4-204ENST00000459994 LRPPRCP42704 1394 aaKnown RBP22.84■■□□□ 1.25
SDF4-204ENST00000459994 FMN2Q9NZ56 1722 aa22.82■■□□□ 1.24
SDF4-204ENST00000459994 YTHDC2Q9H6S0 1430 aaKnown RBP22.82■■□□□ 1.24
SDF4-204ENST00000459994 CFAP70Q5T0N1 1121 aa22.81■■□□□ 1.24
SDF4-204ENST00000459994 SPATA31A6Q5VVP1 1343 aa22.8■■□□□ 1.24
SDF4-204ENST00000459994 ABCC11Q96J66 1382 aa22.79■■□□□ 1.24
SDF4-204ENST00000459994 C14orf93Q9H972 538 aaKnown RBP22.79■■□□□ 1.24
SDF4-204ENST00000459994 NUTM2BA6NNL0 878 aaPredicted RBP22.77■■□□□ 1.24
SDF4-204ENST00000459994 NUTM2EB1AL46 878 aaPredicted RBP22.77■■□□□ 1.24
SDF4-204ENST00000459994 NUTM2AQ8IVF1 878 aaPredicted RBP22.77■■□□□ 1.24
SDF4-204ENST00000459994 PNPLA6Q8IY17 1366 aa22.76■■□□□ 1.23
SDF4-204ENST00000459994 ADGRB1O14514 1584 aa22.76■■□□□ 1.23
SDF4-204ENST00000459994 NUTM2FA1L443 756 aa22.75■■□□□ 1.23
SDF4-204ENST00000459994 DHX57Q6P158 1386 aaKnown RBP22.74■■□□□ 1.23
SDF4-204ENST00000459994 MEX3CQ5U5Q3 659 aaKnown RBP22.72■■□□□ 1.23
SDF4-204ENST00000459994 LRRC59Q96AG4 307 aaKnown RBP22.72■■□□□ 1.23
SDF4-204ENST00000459994 KDM2AQ9Y2K7 1162 aa22.72■■□□□ 1.23
SDF4-204ENST00000459994 SOS2Q07890 1332 aaPredicted RBP22.71■■□□□ 1.23
SDF4-204ENST00000459994 PXDNQ92626 1479 aa22.71■■□□□ 1.23
SDF4-204ENST00000459994 COL22A1Q8NFW1 1626 aaPredicted RBP22.71■■□□□ 1.23
SDF4-204ENST00000459994 USP32Q8NFA0 1604 aa22.7■■□□□ 1.22
SDF4-204ENST00000459994 ESCO1Q5FWF5 840 aa22.69■■□□□ 1.22
SDF4-204ENST00000459994 DCAF11Q8TEB1 546 aa22.69■■□□□ 1.22
SDF4-204ENST00000459994 DLC1Q96QB1 1528 aa22.68■■□□□ 1.22
SDF4-204ENST00000459994 SAFB2Q14151 953 aaKnown RBP eCLIP22.68■■□□□ 1.22
SDF4-204ENST00000459994 ARHGEF28Q8N1W1 1705 aaKnown RBP22.68■■□□□ 1.22
SDF4-204ENST00000459994 MARF1Q9Y4F3 1742 aaKnown RBP22.68■■□□□ 1.22
SDF4-204ENST00000459994 KIF1AQ12756 1690 aa22.68■■□□□ 1.22
SDF4-204ENST00000459994 XPCQ01831 940 aaPredicted RBP22.67■■□□□ 1.22
SDF4-204ENST00000459994 SIRT1Q96EB6 747 aa22.65■■□□□ 1.22
SDF4-204ENST00000459994 PRAM1Q96QH2 718 aa22.65■■□□□ 1.22
SDF4-204ENST00000459994 ADGRB2O60241 1585 aa22.64■■□□□ 1.22
SDF4-204ENST00000459994 FOXO3O43524 673 aa22.64■■□□□ 1.21
SDF4-204ENST00000459994 AFF2P51816 1311 aa22.63■■□□□ 1.21
SDF4-204ENST00000459994 TRAK1Q9UPV9 953 aa22.62■■□□□ 1.21
SDF4-204ENST00000459994 C8orf37Q96NL8 207 aa22.61■■□□□ 1.21
SDF4-204ENST00000459994 NPHP3Q7Z494 1330 aa22.6■■□□□ 1.21
SDF4-204ENST00000459994 ADAMTS2O95450 1211 aa22.6■■□□□ 1.21
SDF4-204ENST00000459994 ZNF772Q68DY9 489 aaPredicted RBP22.6■■□□□ 1.21
SDF4-204ENST00000459994 CCER1Q8TC90 406 aaPredicted RBP22.6■■□□□ 1.21
SDF4-204ENST00000459994 CLSPNQ9HAW4 1339 aa22.59■■□□□ 1.21
SDF4-204ENST00000459994 KIAA1210Q9ULL0 1709 aa22.59■■□□□ 1.21
SDF4-204ENST00000459994 ABCA3Q99758 1704 aa22.57■■□□□ 1.2
SDF4-204ENST00000459994 HIRIP3Q9BW71 556 aaPredicted RBP22.57■■□□□ 1.2
SDF4-204ENST00000459994 POGKQ9P215 609 aa22.56■■□□□ 1.2
SDF4-204ENST00000459994 MINK1Q8N4C8 1332 aaPredicted RBP22.55■■□□□ 1.2
SDF4-204ENST00000459994 TRPM3Q9HCF6 1732 aaPredicted RBP22.54■■□□□ 1.2
SDF4-204ENST00000459994 PHF8Q9UPP1 1060 aa22.52■■□□□ 1.2
SDF4-204ENST00000459994 PRR36Q9H6K5 1346 aa22.52■■□□□ 1.2
SDF4-204ENST00000459994 KRT28Q7Z3Y7 464 aa22.51■■□□□ 1.19
SDF4-204ENST00000459994 SPATA31A3Q5VYP0 1347 aa22.51■■□□□ 1.19
SDF4-204ENST00000459994 RXRBP28702 533 aa22.5■■□□□ 1.19
SDF4-204ENST00000459994 NGLY1Q96IV0 654 aa22.5■■□□□ 1.19
SDF4-204ENST00000459994 TULP4Q9NRJ4 1543 aa22.5■■□□□ 1.19
SDF4-204ENST00000459994 RGS12O14924 1447 aa22.49■■□□□ 1.19
SDF4-204ENST00000459994 ANKARQ7Z5J8 1434 aa22.49■■□□□ 1.19
SDF4-204ENST00000459994 PMFBP1Q8TBY8 1022 aa22.49■■□□□ 1.19
SDF4-204ENST00000459994 STAC3Q96MF2 364 aa22.49■■□□□ 1.19
SDF4-204ENST00000459994 QTRT2Q9H974 415 aaKnown RBP22.49■■□□□ 1.19
SDF4-204ENST00000459994 ALS2Q96Q42 1657 aa22.49■■□□□ 1.19
SDF4-204ENST00000459994 NBPF1Q3BBV0 1214 aa22.48■■□□□ 1.19
SDF4-204ENST00000459994 SIN3AQ96ST3 1273 aa22.48■■□□□ 1.19
SDF4-204ENST00000459994 ITSN1Q15811 1721 aa22.48■■□□□ 1.19
SDF4-204ENST00000459994 CDK12Q9NYV4 1490 aaPredicted RBP22.47■■□□□ 1.19
SDF4-204ENST00000459994 TNS3Q68CZ2 1445 aa22.47■■□□□ 1.19
SDF4-204ENST00000459994 TOPAZ1Q8N9V7 1692 aa22.46■■□□□ 1.19
SDF4-204ENST00000459994 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.46■■□□□ 1.19
SDF4-204ENST00000459994 PLCH1Q4KWH8 1693 aa22.46■■□□□ 1.19
SDF4-204ENST00000459994 CRYBG1Q9Y4K1 1723 aa22.45■■□□□ 1.19
SDF4-204ENST00000459994 BCL9LQ86UU0 1499 aa22.45■■□□□ 1.18
SDF4-204ENST00000459994 WASLO00401 505 aaPredicted RBP22.44■■□□□ 1.18
SDF4-204ENST00000459994 PLEKHG5O94827 1062 aa22.44■■□□□ 1.18
SDF4-204ENST00000459994 ATP7BP35670 1465 aa22.44■■□□□ 1.18
SDF4-204ENST00000459994 TRPM1Q7Z4N2 1603 aa22.44■■□□□ 1.18
SDF4-204ENST00000459994 FNBP4Q8N3X1 1017 aaPredicted RBP22.44■■□□□ 1.18
SDF4-204ENST00000459994 USP21Q9UK80 565 aa22.44■■□□□ 1.18
SDF4-204ENST00000459994 ATRNO75882 1429 aa22.43■■□□□ 1.18
SDF4-204ENST00000459994 CABLES1Q8TDN4 633 aa22.43■■□□□ 1.18
SDF4-204ENST00000459994 QRICH2Q9H0J4 1663 aa22.42■■□□□ 1.18
SDF4-204ENST00000459994 SBNO1A3KN83 1393 aa22.41■■□□□ 1.18
SDF4-204ENST00000459994 RBM6P78332 1123 aaKnown RBP22.41■■□□□ 1.18
SDF4-204ENST00000459994 L3MBTL2Q969R5 705 aa22.41■■□□□ 1.18
SDF4-204ENST00000459994 PSME1Q06323 249 aa22.39■■□□□ 1.17
SDF4-204ENST00000459994 UPF1Q92900 1129 aaKnown RBP eCLIP22.39■■□□□ 1.174e-8■■■■□ 19.3
SDF4-204ENST00000459994 SLIT2O94813 1529 aa22.39■■□□□ 1.17
SDF4-204ENST00000459994 GLI3P10071 1580 aa22.38■■□□□ 1.17
SDF4-204ENST00000459994 BRWD3Q6RI45 1802 aa22.37■■□□□ 1.17
SDF4-204ENST00000459994 NEUROD1Q13562 356 aa22.37■■□□□ 1.17
SDF4-204ENST00000459994 LMOD2Q6P5Q4 547 aa22.37■■□□□ 1.17
SDF4-204ENST00000459994 NWD2Q9ULI1 1742 aa22.37■■□□□ 1.17
SDF4-204ENST00000459994 TRPC5Q9UL62 973 aaPredicted RBP22.36■■□□□ 1.17
SDF4-204ENST00000459994 NRAPQ86VF7 1730 aa22.36■■□□□ 1.17
SDF4-204ENST00000459994 EIF3AQ14152 1382 aaKnown RBP22.36■■□□□ 1.17
SDF4-204ENST00000459994 NUDT16Q96DE0 195 aaKnown RBP22.35■■□□□ 1.17
SDF4-204ENST00000459994 CDK19Q9BWU1 502 aa22.35■■□□□ 1.17
SDF4-204ENST00000459994 TIMELESSQ9UNS1 1208 aa22.34■■□□□ 1.17
SDF4-204ENST00000459994 PHRF1Q9P1Y6 1649 aaKnown RBP22.33■■□□□ 1.17
SDF4-204ENST00000459994 ARHGEF10O15013 1369 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms