RNA–Protein interactions for RNA: ENST00000459809.5

PHF1-206, Transcript of PHD finger protein 1, humanhuman

TSL 4

Gene PHF1, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-206ENST00000459809 ESCO1Q5FWF5 840 aa19.1■□□□□ 0.65
PHF1-206ENST00000459809 POTEAQ6S8J7 498 aa19.1■□□□□ 0.65
PHF1-206ENST00000459809 DDX17Q92841 729 aaKnown RBP19.1■□□□□ 0.65
PHF1-206ENST00000459809 KDM2AQ9Y2K7 1162 aa19.1■□□□□ 0.65
PHF1-206ENST00000459809 IFT172Q9UG01 1749 aa19.09■□□□□ 0.65
PHF1-206ENST00000459809 SOS2Q07890 1332 aaPredicted RBP19.09■□□□□ 0.65
PHF1-206ENST00000459809 NALCNQ8IZF0 1738 aa19.08■□□□□ 0.65
PHF1-206ENST00000459809 ZNF772Q68DY9 489 aaPredicted RBP19.08■□□□□ 0.64
PHF1-206ENST00000459809 NUTM2BA6NNL0 878 aaPredicted RBP19.07■□□□□ 0.64
PHF1-206ENST00000459809 NUTM2EB1AL46 878 aaPredicted RBP19.07■□□□□ 0.64
PHF1-206ENST00000459809 NUTM2AQ8IVF1 878 aaPredicted RBP19.07■□□□□ 0.64
PHF1-206ENST00000459809 NPHP3Q7Z494 1330 aa19.06■□□□□ 0.64
PHF1-206ENST00000459809 PLEKHH1Q9ULM0 1364 aa19.06■□□□□ 0.64
PHF1-206ENST00000459809 POGKQ9P215 609 aa19.05■□□□□ 0.64
PHF1-206ENST00000459809 PRAM1Q96QH2 718 aa19.04■□□□□ 0.64
PHF1-206ENST00000459809 CDC42BPGQ6DT37 1551 aa19.03■□□□□ 0.64
PHF1-206ENST00000459809 FOXO3O43524 673 aa19.03■□□□□ 0.64
PHF1-206ENST00000459809 SHPRHQ149N8 1683 aa19.03■□□□□ 0.64
PHF1-206ENST00000459809 PNPLA6Q8IY17 1366 aa19.03■□□□□ 0.64
PHF1-206ENST00000459809 LRP6O75581 1613 aa19.03■□□□□ 0.64
PHF1-206ENST00000459809 NHSL1Q5SYE7 1610 aa19.03■□□□□ 0.64
PHF1-206ENST00000459809 NUTM2FA1L443 756 aa19.01■□□□□ 0.63
PHF1-206ENST00000459809 LAMC1P11047 1609 aa19■□□□□ 0.63
PHF1-206ENST00000459809 TRAK1Q9UPV9 953 aa19■□□□□ 0.63
PHF1-206ENST00000459809 KNDC1Q76NI1 1749 aa18.98■□□□□ 0.63
PHF1-206ENST00000459809 SAFB2Q14151 953 aaKnown RBP eCLIP18.98■□□□□ 0.63
PHF1-206ENST00000459809 DLC1Q96QB1 1528 aa18.98■□□□□ 0.63
PHF1-206ENST00000459809 RXRBP28702 533 aa18.97■□□□□ 0.63
PHF1-206ENST00000459809 PSME1Q06323 249 aa18.96■□□□□ 0.63
PHF1-206ENST00000459809 NGLY1Q96IV0 654 aa18.96■□□□□ 0.63
PHF1-206ENST00000459809 C8orf37Q96NL8 207 aa18.96■□□□□ 0.63
PHF1-206ENST00000459809 PHF8Q9UPP1 1060 aa18.96■□□□□ 0.63
PHF1-206ENST00000459809 AFF2P51816 1311 aa18.96■□□□□ 0.63
PHF1-206ENST00000459809 ADGRB1O14514 1584 aa18.95■□□□□ 0.62
PHF1-206ENST00000459809 KRT28Q7Z3Y7 464 aa18.95■□□□□ 0.62
PHF1-206ENST00000459809 ADAMTS2O95450 1211 aa18.94■□□□□ 0.62
PHF1-206ENST00000459809 XPCQ01831 940 aaPredicted RBP18.93■□□□□ 0.62
PHF1-206ENST00000459809 QTRT2Q9H974 415 aaKnown RBP18.93■□□□□ 0.62
PHF1-206ENST00000459809 PXDNQ92626 1479 aa18.92■□□□□ 0.62
PHF1-206ENST00000459809 WASLO00401 505 aaPredicted RBP18.91■□□□□ 0.62
PHF1-206ENST00000459809 SPATA31A3Q5VYP0 1347 aa18.91■□□□□ 0.62
PHF1-206ENST00000459809 EIF3AQ14152 1382 aaKnown RBP18.91■□□□□ 0.62
PHF1-206ENST00000459809 FNBP4Q8N3X1 1017 aaPredicted RBP18.9■□□□□ 0.62
PHF1-206ENST00000459809 HIRIP3Q9BW71 556 aaPredicted RBP18.9■□□□□ 0.62
PHF1-206ENST00000459809 MINK1Q8N4C8 1332 aaPredicted RBP18.9■□□□□ 0.62
PHF1-206ENST00000459809 ANKARQ7Z5J8 1434 aa18.9■□□□□ 0.62
PHF1-206ENST00000459809 RBM6P78332 1123 aaKnown RBP18.89■□□□□ 0.61
PHF1-206ENST00000459809 L3MBTL2Q969R5 705 aa18.87■□□□□ 0.61
PHF1-206ENST00000459809 FMN2Q9NZ56 1722 aa18.87■□□□□ 0.61
PHF1-206ENST00000459809 USP21Q9UK80 565 aa18.87■□□□□ 0.61
PHF1-206ENST00000459809 SBNO1A3KN83 1393 aa18.86■□□□□ 0.61
PHF1-206ENST00000459809 PMFBP1Q8TBY8 1022 aa18.86■□□□□ 0.61
PHF1-206ENST00000459809 TRPC5Q9UL62 973 aaPredicted RBP18.86■□□□□ 0.61
PHF1-206ENST00000459809 NBPF1Q3BBV0 1214 aa18.85■□□□□ 0.61
PHF1-206ENST00000459809 CDK12Q9NYV4 1490 aaPredicted RBP18.84■□□□□ 0.61
PHF1-206ENST00000459809 SIN3AQ96ST3 1273 aa18.84■□□□□ 0.61
PHF1-206ENST00000459809 KIF1AQ12756 1690 aa18.84■□□□□ 0.61
PHF1-206ENST00000459809 COL22A1Q8NFW1 1626 aaPredicted RBP18.84■□□□□ 0.61
PHF1-206ENST00000459809 ADGRB2O60241 1585 aa18.83■□□□□ 0.6
PHF1-206ENST00000459809 ARHGEF10O15013 1369 aa18.82■□□□□ 0.6
PHF1-206ENST00000459809 GPRASP1Q5JY77 1395 aa18.82■□□□□ 0.6
PHF1-206ENST00000459809 NEUROD1Q13562 356 aa18.82■□□□□ 0.6
PHF1-206ENST00000459809 NUDT16Q96DE0 195 aaKnown RBP18.82■□□□□ 0.6
PHF1-206ENST00000459809 CDK19Q9BWU1 502 aa18.82■□□□□ 0.6
PHF1-206ENST00000459809 PRR36Q9H6K5 1346 aa18.81■□□□□ 0.6
PHF1-206ENST00000459809 HAP1P54257 671 aaPredicted RBP18.81■□□□□ 0.6
PHF1-206ENST00000459809 TRIM26Q12899 539 aaPredicted RBP18.81■□□□□ 0.6
PHF1-206ENST00000459809 LMOD2Q6P5Q4 547 aa18.81■□□□□ 0.6
PHF1-206ENST00000459809 NGDNQ8NEJ9 315 aaKnown RBP18.81■□□□□ 0.6
PHF1-206ENST00000459809 TNS3Q68CZ2 1445 aa18.81■□□□□ 0.6
PHF1-206ENST00000459809 CCDC61Q9Y6R9 512 aa18.79■□□□□ 0.6
PHF1-206ENST00000459809 TULP4Q9NRJ4 1543 aa18.79■□□□□ 0.6
PHF1-206ENST00000459809 KIAA1210Q9ULL0 1709 aa18.77■□□□□ 0.6
PHF1-206ENST00000459809 UNC5CLQ8IV45 518 aa18.77■□□□□ 0.6
PHF1-206ENST00000459809 BCL9LQ86UU0 1499 aa18.77■□□□□ 0.59
PHF1-206ENST00000459809 CENPJQ9HC77 1338 aaPredicted RBP18.76■□□□□ 0.59
PHF1-206ENST00000459809 PLEKHG3A1L390 1219 aa18.76■□□□□ 0.59
PHF1-206ENST00000459809 CABLES1Q8TDN4 633 aa18.76■□□□□ 0.59
PHF1-206ENST00000459809 UPF1Q92900 1129 aaKnown RBP eCLIP18.76■□□□□ 0.59
PHF1-206ENST00000459809 ATRNO75882 1429 aa18.75■□□□□ 0.59
PHF1-206ENST00000459809 GJD4Q96KN9 370 aaPredicted RBP18.75■□□□□ 0.59
PHF1-206ENST00000459809 USP32Q8NFA0 1604 aa18.74■□□□□ 0.59
PHF1-206ENST00000459809 PAK3O75914 559 aaPredicted RBP18.73■□□□□ 0.59
PHF1-206ENST00000459809 NBPF8Q3BBV2 869 aa18.73■□□□□ 0.59
PHF1-206ENST00000459809 SRPK2P78362 688 aaKnown RBP18.72■□□□□ 0.59
PHF1-206ENST00000459809 RGPD8O14715 1765 aaPredicted RBP18.72■□□□□ 0.59
PHF1-206ENST00000459809 FAM83GA6ND36 823 aa18.71■□□□□ 0.59
PHF1-206ENST00000459809 ARHGEF28Q8N1W1 1705 aaKnown RBP18.71■□□□□ 0.59
PHF1-206ENST00000459809 SLIT2O94813 1529 aa18.7■□□□□ 0.58
PHF1-206ENST00000459809 RGS12O14924 1447 aa18.7■□□□□ 0.58
PHF1-206ENST00000459809 PLEKHG5O94827 1062 aa18.7■□□□□ 0.58
PHF1-206ENST00000459809 ATP7BP35670 1465 aa18.7■□□□□ 0.58
PHF1-206ENST00000459809 ACEP12821 1306 aa18.7■□□□□ 0.58
PHF1-206ENST00000459809 POLR3AO14802 1390 aaPredicted RBP18.69■□□□□ 0.58
PHF1-206ENST00000459809 VPS72Q15906 364 aa18.69■□□□□ 0.58
PHF1-206ENST00000459809 ROCK2O75116 1388 aaKnown RBP18.68■□□□□ 0.58
PHF1-206ENST00000459809 CABP2Q9NPB3 220 aa18.67■□□□□ 0.58
PHF1-206ENST00000459809 EVC2Q86UK5 1308 aa18.67■□□□□ 0.58
PHF1-206ENST00000459809 ONECUT3O60422 494 aaPredicted RBP18.65■□□□□ 0.58
PHF1-206ENST00000459809 BRD4O60885 1362 aaPredicted RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms