RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 DLC1Q96QB1 1528 aa14.7□□□□□ -0.06
HDLBP-228ENST00000459788 DHX57Q6P158 1386 aaKnown RBP14.7□□□□□ -0.06
HDLBP-228ENST00000459788 KIF1AQ12756 1690 aa14.68□□□□□ -0.06
HDLBP-228ENST00000459788 SOS2Q07890 1332 aaPredicted RBP14.67□□□□□ -0.06
HDLBP-228ENST00000459788 LRP6O75581 1613 aa14.67□□□□□ -0.06
HDLBP-228ENST00000459788 COL22A1Q8NFW1 1626 aaPredicted RBP14.66□□□□□ -0.06
HDLBP-228ENST00000459788 KIAA1210Q9ULL0 1709 aa14.66□□□□□ -0.06
HDLBP-228ENST00000459788 ZNF772Q68DY9 489 aaPredicted RBP14.66□□□□□ -0.06
HDLBP-228ENST00000459788 ADGRB1O14514 1584 aa14.65□□□□□ -0.06
HDLBP-228ENST00000459788 NPHP3Q7Z494 1330 aa14.65□□□□□ -0.06
HDLBP-228ENST00000459788 ADGRB2O60241 1585 aa14.64□□□□□ -0.07
HDLBP-228ENST00000459788 PNPLA6Q8IY17 1366 aa14.64□□□□□ -0.07
HDLBP-228ENST00000459788 TMEM132EQ6IEE7 984 aa14.64□□□□□ -0.07
HDLBP-228ENST00000459788 STK26Q9P289 416 aa14.63□□□□□ -0.07
HDLBP-228ENST00000459788 RGPD8O14715 1765 aaPredicted RBP14.62□□□□□ -0.07
HDLBP-228ENST00000459788 CFAP70Q5T0N1 1121 aa14.62□□□□□ -0.07
HDLBP-228ENST00000459788 MEX3CQ5U5Q3 659 aaKnown RBP14.62□□□□□ -0.07
HDLBP-228ENST00000459788 POTEAQ6S8J7 498 aa14.62□□□□□ -0.07
HDLBP-228ENST00000459788 WAPLQ7Z5K2 1190 aa14.62□□□□□ -0.07
HDLBP-228ENST00000459788 ORAI2Q96SN7 254 aa14.62□□□□□ -0.07
HDLBP-228ENST00000459788 MARF1Q9Y4F3 1742 aaKnown RBP14.62□□□□□ -0.07
HDLBP-228ENST00000459788 PXDNQ92626 1479 aa14.61□□□□□ -0.07
HDLBP-228ENST00000459788 ESCO1Q5FWF5 840 aa14.6□□□□□ -0.07
HDLBP-228ENST00000459788 DCAF11Q8TEB1 546 aa14.6□□□□□ -0.07
HDLBP-228ENST00000459788 CDK12Q9NYV4 1490 aaPredicted RBP14.6□□□□□ -0.07
HDLBP-228ENST00000459788 EIF3AQ14152 1382 aaKnown RBP14.6□□□□□ -0.07
HDLBP-228ENST00000459788 PLEKHH1Q9ULM0 1364 aa14.6□□□□□ -0.07
HDLBP-228ENST00000459788 ANKARQ7Z5J8 1434 aa14.59□□□□□ -0.07
HDLBP-228ENST00000459788 ARHGEF28Q8N1W1 1705 aaKnown RBP14.58□□□□□ -0.07
HDLBP-228ENST00000459788 ITSN1Q15811 1721 aa14.56□□□□□ -0.08
HDLBP-228ENST00000459788 DDX17Q92841 729 aaKnown RBP14.56□□□□□ -0.08
HDLBP-228ENST00000459788 PRAM1Q96QH2 718 aa14.56□□□□□ -0.08
HDLBP-228ENST00000459788 POGKQ9P215 609 aa14.56□□□□□ -0.08
HDLBP-228ENST00000459788 NUTM2BA6NNL0 878 aaPredicted RBP14.55□□□□□ -0.08
HDLBP-228ENST00000459788 NUTM2EB1AL46 878 aaPredicted RBP14.55□□□□□ -0.08
HDLBP-228ENST00000459788 NUTM2AQ8IVF1 878 aaPredicted RBP14.55□□□□□ -0.08
HDLBP-228ENST00000459788 USP32Q8NFA0 1604 aa14.55□□□□□ -0.08
HDLBP-228ENST00000459788 FOXO3O43524 673 aa14.54□□□□□ -0.08
HDLBP-228ENST00000459788 KDM2AQ9Y2K7 1162 aa14.54□□□□□ -0.08
HDLBP-228ENST00000459788 AFF2P51816 1311 aa14.54□□□□□ -0.08
HDLBP-228ENST00000459788 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.53□□□□□ -0.08
HDLBP-228ENST00000459788 SBNO1A3KN83 1393 aa14.53□□□□□ -0.08
HDLBP-228ENST00000459788 PSME1Q06323 249 aa14.53□□□□□ -0.08
HDLBP-228ENST00000459788 TULP4Q9NRJ4 1543 aa14.52□□□□□ -0.08
HDLBP-228ENST00000459788 SPATA31A3Q5VYP0 1347 aa14.52□□□□□ -0.08
HDLBP-228ENST00000459788 RXRBP28702 533 aa14.52□□□□□ -0.09
HDLBP-228ENST00000459788 PHF8Q9UPP1 1060 aa14.52□□□□□ -0.09
HDLBP-228ENST00000459788 FNBP4Q8N3X1 1017 aaPredicted RBP14.51□□□□□ -0.09
HDLBP-228ENST00000459788 TRAK1Q9UPV9 953 aa14.51□□□□□ -0.09
HDLBP-228ENST00000459788 RBM6P78332 1123 aaKnown RBP14.5□□□□□ -0.09
HDLBP-228ENST00000459788 NGLY1Q96IV0 654 aa14.5□□□□□ -0.09
HDLBP-228ENST00000459788 C8orf37Q96NL8 207 aa14.5□□□□□ -0.09
HDLBP-228ENST00000459788 TNS3Q68CZ2 1445 aa14.49□□□□□ -0.09
HDLBP-228ENST00000459788 TRPM3Q9HCF6 1732 aaPredicted RBP14.49□□□□□ -0.09
HDLBP-228ENST00000459788 ARHGEF10O15013 1369 aa14.49□□□□□ -0.09
HDLBP-228ENST00000459788 WASLO00401 505 aaPredicted RBP14.49□□□□□ -0.09
HDLBP-228ENST00000459788 KRT28Q7Z3Y7 464 aa14.49□□□□□ -0.09
HDLBP-228ENST00000459788 NUTM2FA1L443 756 aa14.48□□□□□ -0.09
HDLBP-228ENST00000459788 ABCA3Q99758 1704 aa14.48□□□□□ -0.09
HDLBP-228ENST00000459788 NWD2Q9ULI1 1742 aa14.48□□□□□ -0.09
HDLBP-228ENST00000459788 ALS2Q96Q42 1657 aa14.47□□□□□ -0.09
HDLBP-228ENST00000459788 SAFB2Q14151 953 aaKnown RBP eCLIP14.47□□□□□ -0.09
HDLBP-228ENST00000459788 QTRT2Q9H974 415 aaKnown RBP14.47□□□□□ -0.09
HDLBP-228ENST00000459788 TRPC5Q9UL62 973 aaPredicted RBP14.47□□□□□ -0.09
HDLBP-228ENST00000459788 ADAMTS2O95450 1211 aa14.46□□□□□ -0.09
HDLBP-228ENST00000459788 GPRASP1Q5JY77 1395 aa14.46□□□□□ -0.1
HDLBP-228ENST00000459788 TOPAZ1Q8N9V7 1692 aa14.46□□□□□ -0.1
HDLBP-228ENST00000459788 ATRNO75882 1429 aa14.45□□□□□ -0.1
HDLBP-228ENST00000459788 USP21Q9UK80 565 aa14.45□□□□□ -0.1
HDLBP-228ENST00000459788 TRPM1Q7Z4N2 1603 aa14.44□□□□□ -0.1
HDLBP-228ENST00000459788 ATP7BP35670 1465 aa14.44□□□□□ -0.1
HDLBP-228ENST00000459788 MINK1Q8N4C8 1332 aaPredicted RBP14.44□□□□□ -0.1
HDLBP-228ENST00000459788 XPCQ01831 940 aaPredicted RBP14.44□□□□□ -0.1
HDLBP-228ENST00000459788 BCL9LQ86UU0 1499 aa14.44□□□□□ -0.1
HDLBP-228ENST00000459788 SLIT2O94813 1529 aa14.43□□□□□ -0.1
HDLBP-228ENST00000459788 PRR36Q9H6K5 1346 aa14.42□□□□□ -0.1
HDLBP-228ENST00000459788 CRYBG1Q9Y4K1 1723 aa14.42□□□□□ -0.1
HDLBP-228ENST00000459788 HIRIP3Q9BW71 556 aaPredicted RBP14.42□□□□□ -0.1
HDLBP-228ENST00000459788 PLCH1Q4KWH8 1693 aa14.42□□□□□ -0.1
HDLBP-228ENST00000459788 QRICH2Q9H0J4 1663 aa14.42□□□□□ -0.1
HDLBP-228ENST00000459788 RGS12O14924 1447 aa14.41□□□□□ -0.1
HDLBP-228ENST00000459788 L3MBTL2Q969R5 705 aa14.41□□□□□ -0.1
HDLBP-228ENST00000459788 POLR3AO14802 1390 aaPredicted RBP14.4□□□□□ -0.1
HDLBP-228ENST00000459788 BRD4O60885 1362 aaPredicted RBP14.4□□□□□ -0.1
HDLBP-228ENST00000459788 NUDT16Q96DE0 195 aaKnown RBP14.4□□□□□ -0.1
HDLBP-228ENST00000459788 CENPJQ9HC77 1338 aaPredicted RBP14.4□□□□□ -0.1
HDLBP-228ENST00000459788 NBPF1Q3BBV0 1214 aa14.39□□□□□ -0.11
HDLBP-228ENST00000459788 UNC5CLQ8IV45 518 aa14.39□□□□□ -0.11
HDLBP-228ENST00000459788 PMFBP1Q8TBY8 1022 aa14.39□□□□□ -0.11
HDLBP-228ENST00000459788 CCDC61Q9Y6R9 512 aa14.39□□□□□ -0.11
HDLBP-228ENST00000459788 COL14A1Q05707 1796 aaKnown RBP14.39□□□□□ -0.11
HDLBP-228ENST00000459788 PLEKHG3A1L390 1219 aa14.38□□□□□ -0.11
HDLBP-228ENST00000459788 NGDNQ8NEJ9 315 aaKnown RBP14.38□□□□□ -0.11
HDLBP-228ENST00000459788 UPF1Q92900 1129 aaKnown RBP eCLIP14.38□□□□□ -0.11
HDLBP-228ENST00000459788 CDK19Q9BWU1 502 aa14.38□□□□□ -0.11
HDLBP-228ENST00000459788 HAP1P54257 671 aaPredicted RBP14.37□□□□□ -0.11
HDLBP-228ENST00000459788 ATAD2Q6PL18 1390 aa14.36□□□□□ -0.11
HDLBP-228ENST00000459788 NRAPQ86VF7 1730 aa14.36□□□□□ -0.11
HDLBP-228ENST00000459788 TRIM26Q12899 539 aaPredicted RBP14.36□□□□□ -0.11
HDLBP-228ENST00000459788 GJD4Q96KN9 370 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms