RNA–Protein interactions for RNA: ENST00000459711.5

CHRD-207, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 503 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-207ENST00000459711 FOXD1Q16676 465 aa30.29■■■□□ 2.44
CHRD-207ENST00000459711 ZRANB1Q9UGI0 708 aa30.28■■■□□ 2.44
CHRD-207ENST00000459711 CDC42BPGQ6DT37 1551 aa30.27■■■□□ 2.44
CHRD-207ENST00000459711 RPGRIP1LQ68CZ1 1315 aa30.26■■■□□ 2.44
CHRD-207ENST00000459711 NPHP3Q7Z494 1330 aa30.26■■■□□ 2.44
CHRD-207ENST00000459711 BCL9LQ86UU0 1499 aa30.26■■■□□ 2.44
CHRD-207ENST00000459711 MARF1Q9Y4F3 1742 aaKnown RBP30.26■■■□□ 2.43
CHRD-207ENST00000459711 PXDNQ92626 1479 aa30.25■■■□□ 2.43
CHRD-207ENST00000459711 PPLO60437 1756 aa30.23■■■□□ 2.43
CHRD-207ENST00000459711 NAIPQ13075 1403 aa30.23■■■□□ 2.43
CHRD-207ENST00000459711 CCDC125Q86Z20 511 aa30.23■■■□□ 2.43
CHRD-207ENST00000459711 ESCO1Q5FWF5 840 aa30.22■■■□□ 2.43
CHRD-207ENST00000459711 PPARGC1BQ86YN6 1023 aaKnown RBP30.18■■■□□ 2.42
CHRD-207ENST00000459711 GJD4Q96KN9 370 aaPredicted RBP30.18■■■□□ 2.42
CHRD-207ENST00000459711 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.17■■■□□ 2.42
CHRD-207ENST00000459711 FOXO3O43524 673 aa30.16■■■□□ 2.42
CHRD-207ENST00000459711 XPCQ01831 940 aaPredicted RBP30.15■■■□□ 2.42
CHRD-207ENST00000459711 LRPPRCP42704 1394 aaKnown RBP30.14■■■□□ 2.41
CHRD-207ENST00000459711 RRBP1Q9P2E9 1410 aaKnown RBP30.13■■■□□ 2.41
CHRD-207ENST00000459711 TECPR2O15040 1411 aa30.12■■■□□ 2.41
CHRD-207ENST00000459711 GLI3P10071 1580 aa30.11■■■□□ 2.41
CHRD-207ENST00000459711 SLIT2O94813 1529 aa30.1■■■□□ 2.41
CHRD-207ENST00000459711 RALGAPBQ86X10 1494 aa30.09■■■□□ 2.41
CHRD-207ENST00000459711 UNC5CLQ8IV45 518 aa30.08■■■□□ 2.41
CHRD-207ENST00000459711 BLMP54132 1417 aaPredicted RBP30.07■■■□□ 2.4
CHRD-207ENST00000459711 SLC4A1APQ9BWU0 796 aaKnown RBP30.07■■■□□ 2.4
CHRD-207ENST00000459711 NUTM2FA1L443 756 aa30.06■■■□□ 2.4
CHRD-207ENST00000459711 ADGRF5Q8IZF2 1346 aa30.05■■■□□ 2.4
CHRD-207ENST00000459711 WAPLQ7Z5K2 1190 aa30.05■■■□□ 2.4
CHRD-207ENST00000459711 SPATA31A3Q5VYP0 1347 aa30.04■■■□□ 2.4
CHRD-207ENST00000459711 KNDC1Q76NI1 1749 aa30.04■■■□□ 2.4
CHRD-207ENST00000459711 FMN2Q9NZ56 1722 aa30.03■■■□□ 2.4
CHRD-207ENST00000459711 STK26Q9P289 416 aa30.03■■■□□ 2.4
CHRD-207ENST00000459711 KIF1AQ12756 1690 aa30.03■■■□□ 2.4
CHRD-207ENST00000459711 USP32Q8NFA0 1604 aa30.03■■■□□ 2.4
CHRD-207ENST00000459711 BRWD3Q6RI45 1802 aa30.02■■■□□ 2.4
CHRD-207ENST00000459711 CCDC144AA2RUR9 1427 aa30.02■■■□□ 2.4
CHRD-207ENST00000459711 ABCC11Q96J66 1382 aa30.02■■■□□ 2.4
CHRD-207ENST00000459711 PLEKHH1Q9ULM0 1364 aa30.01■■■□□ 2.39
CHRD-207ENST00000459711 IFT172Q9UG01 1749 aa29.99■■■□□ 2.39
CHRD-207ENST00000459711 ANKRD30BQ9BXX2 1392 aa29.97■■■□□ 2.39
CHRD-207ENST00000459711 SPATA31E1Q6ZUB1 1445 aa29.96■■■□□ 2.39
CHRD-207ENST00000459711 DEFB132Q7Z7B7 95 aa29.96■■■□□ 2.39
CHRD-207ENST00000459711 KRT28Q7Z3Y7 464 aa29.95■■■□□ 2.39
CHRD-207ENST00000459711 TMEM132EQ6IEE7 984 aa29.94■■■□□ 2.38
CHRD-207ENST00000459711 RGL3Q3MIN7 710 aa29.93■■■□□ 2.38
CHRD-207ENST00000459711 SEPT12Q8IYM1 358 aa29.93■■■□□ 2.38
CHRD-207ENST00000459711 PIK3C2GO75747 1445 aa29.93■■■□□ 2.38
CHRD-207ENST00000459711 TNS3Q68CZ2 1445 aa29.93■■■□□ 2.38
CHRD-207ENST00000459711 VPS72Q15906 364 aa29.92■■■□□ 2.38
CHRD-207ENST00000459711 YTHDC2Q9H6S0 1430 aaKnown RBP29.92■■■□□ 2.38
CHRD-207ENST00000459711 NWD2Q9ULI1 1742 aa29.92■■■□□ 2.38
CHRD-207ENST00000459711 PLCH1Q4KWH8 1693 aa29.91■■■□□ 2.38
CHRD-207ENST00000459711 SF3B2Q13435 895 aaKnown RBP29.91■■■□□ 2.38
CHRD-207ENST00000459711 LRP5O75197 1615 aa29.89■■■□□ 2.38
CHRD-207ENST00000459711 HAP1P54257 671 aaPredicted RBP29.89■■■□□ 2.38
CHRD-207ENST00000459711 RGPD8O14715 1765 aaPredicted RBP29.89■■■□□ 2.38
CHRD-207ENST00000459711 ONECUT3O60422 494 aaPredicted RBP29.88■■■□□ 2.37
CHRD-207ENST00000459711 SIRT1Q96EB6 747 aa29.87■■■□□ 2.37
CHRD-207ENST00000459711 PHF8Q9UPP1 1060 aa29.87■■■□□ 2.37
CHRD-207ENST00000459711 ABCA3Q99758 1704 aa29.87■■■□□ 2.37
CHRD-207ENST00000459711 PSME1Q06323 249 aa29.86■■■□□ 2.37
CHRD-207ENST00000459711 CABLES1Q8TDN4 633 aa29.86■■■□□ 2.37
CHRD-207ENST00000459711 SBNO1A3KN83 1393 aa29.85■■■□□ 2.37
CHRD-207ENST00000459711 KRT27Q7Z3Y8 459 aa29.84■■■□□ 2.37
CHRD-207ENST00000459711 NRXN1Q9ULB1 1477 aa29.84■■■□□ 2.37
CHRD-207ENST00000459711 CCDC9Q9Y3X0 531 aaKnown RBP29.82■■■□□ 2.36
CHRD-207ENST00000459711 ARHGEF10O15013 1369 aa29.81■■■□□ 2.36
CHRD-207ENST00000459711 PLEKHG5O94827 1062 aa29.78■■■□□ 2.36
CHRD-207ENST00000459711 LMOD2Q6P5Q4 547 aa29.77■■■□□ 2.36
CHRD-207ENST00000459711 C14orf93Q9H972 538 aaKnown RBP29.77■■■□□ 2.36
CHRD-207ENST00000459711 NRAPQ86VF7 1730 aa29.76■■■□□ 2.36
CHRD-207ENST00000459711 FAM83GA6ND36 823 aa29.75■■■□□ 2.35
CHRD-207ENST00000459711 BAG6P46379 1132 aa29.75■■■□□ 2.35
CHRD-207ENST00000459711 MPHOSPH9Q99550 1183 aa29.75■■■□□ 2.35
CHRD-207ENST00000459711 DHX57Q6P158 1386 aaKnown RBP29.75■■■□□ 2.35
CHRD-207ENST00000459711 ANKARQ7Z5J8 1434 aa29.72■■■□□ 2.35
CHRD-207ENST00000459711 A0A0G2JS52 829 aa29.72■■■□□ 2.35
CHRD-207ENST00000459711 MYT1Q01538 1121 aa29.72■■■□□ 2.35
CHRD-207ENST00000459711 PSDA5PKW4 1024 aaPredicted RBP29.71■■■□□ 2.35
CHRD-207ENST00000459711 PRAM1Q96QH2 718 aa29.71■■■□□ 2.35
CHRD-207ENST00000459711 HRCP23327 699 aa29.7■■■□□ 2.35
CHRD-207ENST00000459711 SAFB2Q14151 953 aaKnown RBP eCLIP29.7■■■□□ 2.35
CHRD-207ENST00000459711 CFAP70Q5T0N1 1121 aa29.7■■■□□ 2.35
CHRD-207ENST00000459711 TRPM3Q9HCF6 1732 aaPredicted RBP29.7■■■□□ 2.34
CHRD-207ENST00000459711 FAM98CQ17RN3 349 aaKnown RBP29.69■■■□□ 2.34
CHRD-207ENST00000459711 PMFBP1Q8TBY8 1022 aa29.69■■■□□ 2.34
CHRD-207ENST00000459711 DLC1Q96QB1 1528 aa29.68■■■□□ 2.34
CHRD-207ENST00000459711 ADGRB2O60241 1585 aa29.68■■■□□ 2.34
CHRD-207ENST00000459711 COL14A1Q05707 1796 aaKnown RBP29.67■■■□□ 2.34
CHRD-207ENST00000459711 BTG4Q9NY30 223 aa29.67■■■□□ 2.34
CHRD-207ENST00000459711 RGPD1P0DJD0 1748 aa29.67■■■□□ 2.34
CHRD-207ENST00000459711 ALS2Q96Q42 1657 aa29.66■■■□□ 2.34
CHRD-207ENST00000459711 EN1Q05925 392 aaPredicted RBP29.62■■■□□ 2.33
CHRD-207ENST00000459711 POGKQ9P215 609 aa29.62■■■□□ 2.33
CHRD-207ENST00000459711 DISP2A7MBM2 1401 aa29.61■■■□□ 2.33
CHRD-207ENST00000459711 THSD7AQ9UPZ6 1657 aa29.6■■■□□ 2.33
CHRD-207ENST00000459711 SPATA31A5Q5VU36 1347 aa29.6■■■□□ 2.33
CHRD-207ENST00000459711 SPATA31A7Q8IWB4 1347 aa29.6■■■□□ 2.33
CHRD-207ENST00000459711 GPRASP1Q5JY77 1395 aa29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms