RNA–Protein interactions for RNA: ENST00000459670.2

NEDD9-205, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-205ENST00000459670 ANKLE2Q86XL3 938 aa14.6□□□□□ -0.07
NEDD9-205ENST00000459670 NKTRP30414 1462 aaKnown RBP14.6□□□□□ -0.07
NEDD9-205ENST00000459670 ITSN1Q15811 1721 aa14.6□□□□□ -0.07
NEDD9-205ENST00000459670 ATP7BP35670 1465 aa14.59□□□□□ -0.07
NEDD9-205ENST00000459670 PUS7Q96PZ0 661 aaKnown RBP14.59□□□□□ -0.07
NEDD9-205ENST00000459670 NRKQ7Z2Y5 1582 aa14.59□□□□□ -0.07
NEDD9-205ENST00000459670 ANKRD26Q9UPS8 1709 aa14.58□□□□□ -0.07
NEDD9-205ENST00000459670 CD163L1Q9NR16 1453 aa14.58□□□□□ -0.08
NEDD9-205ENST00000459670 RGPD8O14715 1765 aaPredicted RBP14.58□□□□□ -0.08
NEDD9-205ENST00000459670 TMF1P82094 1093 aa14.58□□□□□ -0.08
NEDD9-205ENST00000459670 DDX10Q13206 875 aaKnown RBP14.58□□□□□ -0.08
NEDD9-205ENST00000459670 SLC26A8Q96RN1 970 aa14.57□□□□□ -0.08
NEDD9-205ENST00000459670 SLC24A1O60721 1099 aa14.56□□□□□ -0.08
NEDD9-205ENST00000459670 PRAM1Q96QH2 718 aa14.56□□□□□ -0.08
NEDD9-205ENST00000459670 SENP3Q9H4L4 574 aaPredicted RBP14.56□□□□□ -0.08
NEDD9-205ENST00000459670 PER1O15534 1290 aaPredicted RBP14.54□□□□□ -0.08
NEDD9-205ENST00000459670 STK26Q9P289 416 aa14.54□□□□□ -0.08
NEDD9-205ENST00000459670 NCKAP5LQ9HCH0 1330 aa14.54□□□□□ -0.08
NEDD9-205ENST00000459670 KIF20BQ96Q89 1820 aa14.53□□□□□ -0.08
NEDD9-205ENST00000459670 ADGRL3Q9HAR2 1447 aa14.52□□□□□ -0.08
NEDD9-205ENST00000459670 NINLQ9Y2I6 1382 aa14.52□□□□□ -0.08
NEDD9-205ENST00000459670 WAPLQ7Z5K2 1190 aa14.52□□□□□ -0.09
NEDD9-205ENST00000459670 USP54Q70EL1 1684 aa14.52□□□□□ -0.09
NEDD9-205ENST00000459670 AMOTL2Q9Y2J4 779 aa14.51□□□□□ -0.09
NEDD9-205ENST00000459670 ATAD2Q6PL18 1390 aa14.5□□□□□ -0.09
NEDD9-205ENST00000459670 NPC1L1Q9UHC9 1359 aa14.5□□□□□ -0.09
NEDD9-205ENST00000459670 EVC2Q86UK5 1308 aa14.5□□□□□ -0.09
NEDD9-205ENST00000459670 KCNA6P17658 529 aa14.5□□□□□ -0.09
NEDD9-205ENST00000459670 HSPA2P54652 639 aa14.5□□□□□ -0.09
NEDD9-205ENST00000459670 CDCA8Q53HL2 280 aa14.5□□□□□ -0.09
NEDD9-205ENST00000459670 MARF1Q9Y4F3 1742 aaKnown RBP14.49□□□□□ -0.09
NEDD9-205ENST00000459670 MIER1Q8N108 512 aa14.49□□□□□ -0.09
NEDD9-205ENST00000459670 CPSF1Q10570 1443 aaKnown RBP14.49□□□□□ -0.09
NEDD9-205ENST00000459670 ANKRD36BQ8N2N9 1353 aa14.48□□□□□ -0.09
NEDD9-205ENST00000459670 PARD3Q8TEW0 1356 aa14.48□□□□□ -0.09
NEDD9-205ENST00000459670 MINK1Q8N4C8 1332 aaPredicted RBP14.48□□□□□ -0.09
NEDD9-205ENST00000459670 ANKARQ7Z5J8 1434 aa14.48□□□□□ -0.09
NEDD9-205ENST00000459670 PRR36Q9H6K5 1346 aa14.47□□□□□ -0.09
NEDD9-205ENST00000459670 PHF23Q9BUL5 403 aaPredicted RBP14.47□□□□□ -0.09
NEDD9-205ENST00000459670 WASLO00401 505 aaPredicted RBP14.46□□□□□ -0.09
NEDD9-205ENST00000459670 SAFB2Q14151 953 aaKnown RBP eCLIP14.46□□□□□ -0.09
NEDD9-205ENST00000459670 POGKQ9P215 609 aa14.46□□□□□ -0.09
NEDD9-205ENST00000459670 NCOA3Q9Y6Q9 1424 aa14.46□□□□□ -0.09
NEDD9-205ENST00000459670 A0A1W2PP64 1363 aa14.46□□□□□ -0.1
NEDD9-205ENST00000459670 DCCP43146 1447 aa14.44□□□□□ -0.1
NEDD9-205ENST00000459670 AMER1Q5JTC6 1135 aaPredicted RBP14.44□□□□□ -0.1
NEDD9-205ENST00000459670 PRKRIP1Q9H875 184 aaPredicted RBP14.44□□□□□ -0.1
NEDD9-205ENST00000459670 LRRC7Q96NW7 1537 aa14.44□□□□□ -0.1
NEDD9-205ENST00000459670 KTN1Q86UP2 1357 aaKnown RBP14.44□□□□□ -0.1
NEDD9-205ENST00000459670 KIF1AQ12756 1690 aa14.43□□□□□ -0.1
NEDD9-205ENST00000459670 BCANQ96GW7 911 aa14.43□□□□□ -0.1
NEDD9-205ENST00000459670 CDK19Q9BWU1 502 aa14.43□□□□□ -0.1
NEDD9-205ENST00000459670 CARD14Q9BXL6 1004 aa14.43□□□□□ -0.1
NEDD9-205ENST00000459670 PANK3Q9H999 370 aa14.43□□□□□ -0.1
NEDD9-205ENST00000459670 CABP2Q9NPB3 220 aa14.43□□□□□ -0.1
NEDD9-205ENST00000459670 LTBP4Q8N2S1 1624 aa14.43□□□□□ -0.1
NEDD9-205ENST00000459670 PPIP5K1Q6PFW1 1433 aa14.42□□□□□ -0.1
NEDD9-205ENST00000459670 SSH2Q76I76 1423 aa14.42□□□□□ -0.1
NEDD9-205ENST00000459670 NSD3Q9BZ95 1437 aa14.42□□□□□ -0.1
NEDD9-205ENST00000459670 TRPM3Q9HCF6 1732 aaPredicted RBP14.42□□□□□ -0.1
NEDD9-205ENST00000459670 PIK3C2AO00443 1686 aa14.41□□□□□ -0.1
NEDD9-205ENST00000459670 POLR3AO14802 1390 aaPredicted RBP14.4□□□□□ -0.1
NEDD9-205ENST00000459670 SLC12A5Q9H2X9 1139 aa14.4□□□□□ -0.1
NEDD9-205ENST00000459670 SHPRHQ149N8 1683 aa14.39□□□□□ -0.11
NEDD9-205ENST00000459670 CCER2I3L3R5 266 aa14.38□□□□□ -0.11
NEDD9-205ENST00000459670 POLR3GLQ9BT43 218 aa14.38□□□□□ -0.11
NEDD9-205ENST00000459670 EDC4Q6P2E9 1401 aaKnown RBP14.38□□□□□ -0.11
NEDD9-205ENST00000459670 NSD2O96028 1365 aa14.37□□□□□ -0.11
NEDD9-205ENST00000459670 NUDT16Q96DE0 195 aaKnown RBP14.37□□□□□ -0.11
NEDD9-205ENST00000459670 MST1RQ04912 1400 aa14.37□□□□□ -0.11
NEDD9-205ENST00000459670 ALS2Q96Q42 1657 aa14.36□□□□□ -0.11
NEDD9-205ENST00000459670 TMEM94Q12767 1356 aa14.36□□□□□ -0.11
NEDD9-205ENST00000459670 CRYBG1Q9Y4K1 1723 aa14.36□□□□□ -0.11
NEDD9-205ENST00000459670 USP6P35125 1406 aa14.36□□□□□ -0.11
NEDD9-205ENST00000459670 PLEKHG3A1L390 1219 aa14.36□□□□□ -0.11
NEDD9-205ENST00000459670 SRPK2P78362 688 aaKnown RBP14.36□□□□□ -0.11
NEDD9-205ENST00000459670 ANP32CO43423 234 aa14.35□□□□□ -0.11
NEDD9-205ENST00000459670 ILDR1Q86SU0 546 aaPredicted RBP14.35□□□□□ -0.11
NEDD9-205ENST00000459670 CCDC61Q9Y6R9 512 aa14.34□□□□□ -0.11
NEDD9-205ENST00000459670 NHSL1Q5SYE7 1610 aa14.33□□□□□ -0.11
NEDD9-205ENST00000459670 OVOS2A0A0J9YW53 1432 aa14.33□□□□□ -0.11
NEDD9-205ENST00000459670 OVOS2Q6IE36 1432 aa14.33□□□□□ -0.11
NEDD9-205ENST00000459670 C1orf167Q5SNV9 1468 aa14.33□□□□□ -0.12
NEDD9-205ENST00000459670 CABP1Q9NZU7 370 aa14.33□□□□□ -0.12
NEDD9-205ENST00000459670 ZNF335Q9H4Z2 1342 aaPredicted RBP14.33□□□□□ -0.12
NEDD9-205ENST00000459670 MAP2P11137 1827 aaKnown RBP14.32□□□□□ -0.12
NEDD9-205ENST00000459670 RALBP1Q15311 655 aa14.32□□□□□ -0.12
NEDD9-205ENST00000459670 CCDC184Q52MB2 194 aa14.32□□□□□ -0.12
NEDD9-205ENST00000459670 SMG6Q86US8 1419 aaKnown RBP14.32□□□□□ -0.12
NEDD9-205ENST00000459670 COL3A1P02461 1466 aaPredicted RBP14.31□□□□□ -0.12
NEDD9-205ENST00000459670 MYBBP1AQ9BQG0 1328 aaKnown RBP14.31□□□□□ -0.12
NEDD9-205ENST00000459670 BRD4O60885 1362 aaPredicted RBP14.31□□□□□ -0.12
NEDD9-205ENST00000459670 PHRF1Q9P1Y6 1649 aaKnown RBP14.3□□□□□ -0.12
NEDD9-205ENST00000459670 KNSTRNQ9Y448 316 aa14.3□□□□□ -0.12
NEDD9-205ENST00000459670 TMC1Q8TDI8 760 aa14.29□□□□□ -0.12
NEDD9-205ENST00000459670 TERF2IPQ9NYB0 399 aa14.29□□□□□ -0.12
NEDD9-205ENST00000459670 PEAK1Q9H792 1746 aa14.29□□□□□ -0.12
NEDD9-205ENST00000459670 ACEP12821 1306 aa14.28□□□□□ -0.12
NEDD9-205ENST00000459670 CGNL1Q0VF96 1302 aa14.28□□□□□ -0.12
NEDD9-205ENST00000459670 PROSER2Q86WR7 435 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms