RNA–Protein interactions for RNA: ENST00000458304.2

SPARCL1-204, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-204ENST00000458304 CFHP08603 1231 aa7.34□□□□□ -1.23
SPARCL1-204ENST00000458304 CCDC97Q96F63 343 aaPredicted RBP7.34□□□□□ -1.23
SPARCL1-204ENST00000458304 PRR14Q9BWN1 585 aa7.34□□□□□ -1.23
SPARCL1-204ENST00000458304 FAM117AQ9C073 453 aa7.34□□□□□ -1.23
SPARCL1-204ENST00000458304 SERPINA10Q9UK55 444 aa7.34□□□□□ -1.23
SPARCL1-204ENST00000458304 COPS2P61201 443 aa7.33□□□□□ -1.24
SPARCL1-204ENST00000458304 CHMP4AQ9BY43 222 aa7.33□□□□□ -1.24
SPARCL1-204ENST00000458304 PCDHB3Q9Y5E6 796 aa7.33□□□□□ -1.24
SPARCL1-204ENST00000458304 SMARCA2P51531 1590 aa7.33□□□□□ -1.24
SPARCL1-204ENST00000458304 IRF6O14896 467 aa7.32□□□□□ -1.24
SPARCL1-204ENST00000458304 KMT5BQ4FZB7 885 aa7.32□□□□□ -1.24
SPARCL1-204ENST00000458304 BLOC1S3Q6QNY0 202 aa7.32□□□□□ -1.24
SPARCL1-204ENST00000458304 NKX2-3Q8TAU0 364 aa7.32□□□□□ -1.24
SPARCL1-204ENST00000458304 DDRGK1Q96HY6 314 aa7.32□□□□□ -1.24
SPARCL1-204ENST00000458304 MINK1Q8N4C8 1332 aaPredicted RBP7.31□□□□□ -1.24
SPARCL1-204ENST00000458304 ZPR1O75312 459 aa7.31□□□□□ -1.24
SPARCL1-204ENST00000458304 RETREG2Q8NC44 543 aa7.31□□□□□ -1.24
SPARCL1-204ENST00000458304 CECR2Q9BXF3 1484 aa7.3□□□□□ -1.24
SPARCL1-204ENST00000458304 MROH2BQ7Z745 1585 aa7.3□□□□□ -1.24
SPARCL1-204ENST00000458304 USP35Q9P2H5 1018 aa7.3□□□□□ -1.24
SPARCL1-204ENST00000458304 PLEKHG3A1L390 1219 aa7.29□□□□□ -1.24
SPARCL1-204ENST00000458304 PPP1R18Q6NYC8 613 aa7.29□□□□□ -1.24
SPARCL1-204ENST00000458304 CCDC102AQ96A19 550 aa7.29□□□□□ -1.24
SPARCL1-204ENST00000458304 DDX11L8A8MPP1 907 aa7.28□□□□□ -1.24
SPARCL1-204ENST00000458304 ZNF777Q9ULD5 760 aaPredicted RBP7.28□□□□□ -1.24
SPARCL1-204ENST00000458304 WIZO95785 1651 aa7.28□□□□□ -1.24
SPARCL1-204ENST00000458304 TOP2AP11388 1531 aaKnown RBP7.27□□□□□ -1.25
SPARCL1-204ENST00000458304 IRF5Q13568 498 aa7.27□□□□□ -1.25
SPARCL1-204ENST00000458304 RSPH4AQ5TD94 716 aa7.27□□□□□ -1.25
SPARCL1-204ENST00000458304 PROSER2Q86WR7 435 aaPredicted RBP7.27□□□□□ -1.25
SPARCL1-204ENST00000458304 GOPCQ9HD26 462 aa7.27□□□□□ -1.25
SPARCL1-204ENST00000458304 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.27□□□□□ -1.25
SPARCL1-204ENST00000458304 PEG3Q9GZU2 1588 aa7.27□□□□□ -1.25
SPARCL1-204ENST00000458304 BAZ1BQ9UIG0 1483 aaKnown RBP7.26□□□□□ -1.25
SPARCL1-204ENST00000458304 PATL2C9JE40 543 aaKnown RBP7.26□□□□□ -1.25
SPARCL1-204ENST00000458304 TLL1O43897 1013 aa7.26□□□□□ -1.25
SPARCL1-204ENST00000458304 GCGRP47871 477 aa7.26□□□□□ -1.25
SPARCL1-204ENST00000458304 SULF1Q8IWU6 871 aa7.26□□□□□ -1.25
SPARCL1-204ENST00000458304 RDH13Q8NBN7 331 aa7.26□□□□□ -1.25
SPARCL1-204ENST00000458304 CD46P15529 392 aa7.25□□□□□ -1.25
SPARCL1-204ENST00000458304 PUS10Q3MIT2 529 aaKnown RBP7.25□□□□□ -1.25
SPARCL1-204ENST00000458304 TMUB1Q9BVT8 246 aa7.25□□□□□ -1.25
SPARCL1-204ENST00000458304 EIF4G1Q04637 1599 aaKnown RBP7.25□□□□□ -1.25
SPARCL1-204ENST00000458304 MDM2Q00987 491 aaPredicted RBP7.24□□□□□ -1.25
SPARCL1-204ENST00000458304 FUT2Q10981 343 aa7.24□□□□□ -1.25
SPARCL1-204ENST00000458304 MCM6Q14566 821 aa7.24□□□□□ -1.25
SPARCL1-204ENST00000458304 SCUBE3Q8IX30 993 aa7.24□□□□□ -1.25
SPARCL1-204ENST00000458304 NR1I2O75469 434 aa7.23□□□□□ -1.25
SPARCL1-204ENST00000458304 MORN1Q5T089 497 aa7.23□□□□□ -1.25
SPARCL1-204ENST00000458304 AMOTL2Q9Y2J4 779 aa7.23□□□□□ -1.25
SPARCL1-204ENST00000458304 ADH1BP00325 375 aa7.22□□□□□ -1.25
SPARCL1-204ENST00000458304 PDE4CQ08493 712 aa7.22□□□□□ -1.25
SPARCL1-204ENST00000458304 HMGXB3Q12766 1538 aa7.22□□□□□ -1.25
SPARCL1-204ENST00000458304 RNF223E7ERA6 249 aa7.21□□□□□ -1.26
SPARCL1-204ENST00000458304 GGCXP38435 758 aa7.21□□□□□ -1.26
SPARCL1-204ENST00000458304 ATP6V1AP38606 617 aa7.21□□□□□ -1.26
SPARCL1-204ENST00000458304 FNBP4Q8N3X1 1017 aaPredicted RBP7.21□□□□□ -1.26
SPARCL1-204ENST00000458304 THAP11Q96EK4 314 aa7.21□□□□□ -1.26
SPARCL1-204ENST00000458304 REPIN1Q9BWE0 567 aaKnown RBP7.21□□□□□ -1.26
SPARCL1-204ENST00000458304 IRX2Q9BZI1 471 aaPredicted RBP7.21□□□□□ -1.26
SPARCL1-204ENST00000458304 PRKD2Q9BZL6 878 aa7.21□□□□□ -1.26
SPARCL1-204ENST00000458304 GPCPD1Q9NPB8 672 aa7.21□□□□□ -1.26
SPARCL1-204ENST00000458304 ATAD2BQ9ULI0 1458 aa7.21□□□□□ -1.26
SPARCL1-204ENST00000458304 FAM217BQ9NTX9 383 aaPredicted RBP7.2□□□□□ -1.26
SPARCL1-204ENST00000458304 SLC27A5Q9Y2P5 690 aa7.2□□□□□ -1.26
SPARCL1-204ENST00000458304 V9GY48 417 aaPredicted RBP7.2□□□□□ -1.26
SPARCL1-204ENST00000458304 S1PR4O95977 384 aa7.19□□□□□ -1.26
SPARCL1-204ENST00000458304 CLCN1P35523 988 aa7.19□□□□□ -1.26
SPARCL1-204ENST00000458304 FAM177A1Q8N128 213 aaPredicted RBP7.19□□□□□ -1.26
SPARCL1-204ENST00000458304 EMID1Q96A84 441 aaPredicted RBP7.19□□□□□ -1.26
SPARCL1-204ENST00000458304 PPEF1O14829 653 aaPredicted RBP7.18□□□□□ -1.26
SPARCL1-204ENST00000458304 PPP1R15AO75807 674 aaPredicted RBP7.18□□□□□ -1.26
SPARCL1-204ENST00000458304 AMHR2Q16671 573 aa7.18□□□□□ -1.26
SPARCL1-204ENST00000458304 PCMTD1Q96MG8 357 aaPredicted RBP7.18□□□□□ -1.26
SPARCL1-204ENST00000458304 NCAPD3P42695 1498 aa7.17□□□□□ -1.26
SPARCL1-204ENST00000458304 KDM4AO75164 1064 aa7.17□□□□□ -1.26
SPARCL1-204ENST00000458304 ANKLE1Q8NAG6 615 aa7.17□□□□□ -1.26
SPARCL1-204ENST00000458304 SPSB2Q99619 263 aa7.17□□□□□ -1.26
SPARCL1-204ENST00000458304 SLC6A16Q9GZN6 736 aa7.17□□□□□ -1.26
SPARCL1-204ENST00000458304 SALL2Q9Y467 1007 aaPredicted RBP7.17□□□□□ -1.26
SPARCL1-204ENST00000458304 KCNA1Q09470 495 aa7.16□□□□□ -1.26
SPARCL1-204ENST00000458304 BRICD5Q6PL45 260 aa7.16□□□□□ -1.26
SPARCL1-204ENST00000458304 FMNL1O95466 1100 aaPredicted RBP7.15□□□□□ -1.26
SPARCL1-204ENST00000458304 GRIPAP1Q4V328 841 aa7.15□□□□□ -1.26
SPARCL1-204ENST00000458304 RNF19BQ6ZMZ0 732 aa7.15□□□□□ -1.26
SPARCL1-204ENST00000458304 PARP9Q8IXQ6 854 aa7.15□□□□□ -1.26
SPARCL1-204ENST00000458304 FAM160A2Q8N612 972 aaPredicted RBP7.15□□□□□ -1.26
SPARCL1-204ENST00000458304 HOXA2O43364 376 aa7.14□□□□□ -1.27
SPARCL1-204ENST00000458304 USP46P62068 366 aa7.14□□□□□ -1.27
SPARCL1-204ENST00000458304 PLA2G2CQ5R387 149 aa7.14□□□□□ -1.27
SPARCL1-204ENST00000458304 HLA-CQ95604 372 aa7.14□□□□□ -1.27
SPARCL1-204ENST00000458304 POM121Q96HA1 1249 aa7.14□□□□□ -1.27
SPARCL1-204ENST00000458304 ACIN1Q9UKV3 1341 aaKnown RBP7.14□□□□□ -1.27
SPARCL1-204ENST00000458304 CC2D2AQ9P2K1 1620 aa7.13□□□□□ -1.27
SPARCL1-204ENST00000458304 CCDC88BA6NC98 1476 aa7.13□□□□□ -1.27
SPARCL1-204ENST00000458304 SSTR3P32745 418 aaPredicted RBP7.13□□□□□ -1.27
SPARCL1-204ENST00000458304 CCDC27Q2M243 656 aa7.13□□□□□ -1.27
SPARCL1-204ENST00000458304 MSS51Q4VC12 460 aa7.13□□□□□ -1.27
SPARCL1-204ENST00000458304 LIAT1Q6ZQX7 453 aa7.13□□□□□ -1.27
SPARCL1-204ENST00000458304 BRD1O95696 1058 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms