RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 STK26Q9P289 416 aa25.11■■□□□ 1.61
CNEP1R1-203ENST00000458059 CLASP1Q7Z460 1538 aa25.11■■□□□ 1.61
CNEP1R1-203ENST00000458059 CABP2Q9NPB3 220 aa25.11■■□□□ 1.61
CNEP1R1-203ENST00000458059 U2SURPO15042 1029 aaKnown RBP25.1■■□□□ 1.61
CNEP1R1-203ENST00000458059 RTEL1-TNFRSF6BF6WH68 1400 aa25.1■■□□□ 1.61
CNEP1R1-203ENST00000458059 PDZRN3Q9UPQ7 1066 aa25.1■■□□□ 1.61
CNEP1R1-203ENST00000458059 TET3O43151 1660 aa25.09■■□□□ 1.61
CNEP1R1-203ENST00000458059 MAP3K4Q9Y6R4 1608 aa25.07■■□□□ 1.6
CNEP1R1-203ENST00000458059 POGKQ9P215 609 aa25.07■■□□□ 1.6
CNEP1R1-203ENST00000458059 POLR3AO14802 1390 aaPredicted RBP25.07■■□□□ 1.6
CNEP1R1-203ENST00000458059 FTSJ3Q8IY81 847 aaKnown RBP25.04■■□□□ 1.6
CNEP1R1-203ENST00000458059 MAPK8IP3Q9UPT6 1336 aa25.04■■□□□ 1.6
CNEP1R1-203ENST00000458059 CFAP53Q96M91 514 aa25.04■■□□□ 1.6
CNEP1R1-203ENST00000458059 GGNBP2Q9H3C7 697 aa25.03■■□□□ 1.6
CNEP1R1-203ENST00000458059 MROH2AA6NES4 1674 aa25.02■■□□□ 1.6
CNEP1R1-203ENST00000458059 PMFBP1Q8TBY8 1022 aa25■■□□□ 1.59
CNEP1R1-203ENST00000458059 KIF1BO60333 1816 aa24.99■■□□□ 1.59
CNEP1R1-203ENST00000458059 DEPDC5O75140 1603 aa24.99■■□□□ 1.59
CNEP1R1-203ENST00000458059 BECN1Q14457 450 aa24.99■■□□□ 1.59
CNEP1R1-203ENST00000458059 SMC4Q9NTJ3 1288 aa24.99■■□□□ 1.59
CNEP1R1-203ENST00000458059 SLC24A1O60721 1099 aa24.99■■□□□ 1.59
CNEP1R1-203ENST00000458059 C14orf93Q9H972 538 aaKnown RBP24.99■■□□□ 1.59
CNEP1R1-203ENST00000458059 UPF2Q9HAU5 1272 aaKnown RBP24.99■■□□□ 1.59
CNEP1R1-203ENST00000458059 SRPK2P78362 688 aaKnown RBP24.98■■□□□ 1.59
CNEP1R1-203ENST00000458059 EXOSC9Q06265 439 aaKnown RBP24.98■■□□□ 1.59
CNEP1R1-203ENST00000458059 MFAP1P55081 439 aaKnown RBP24.97■■□□□ 1.59
CNEP1R1-203ENST00000458059 ITPRIPQ8IWB1 547 aa24.97■■□□□ 1.59
CNEP1R1-203ENST00000458059 MYOM2P54296 1465 aa24.97■■□□□ 1.59
CNEP1R1-203ENST00000458059 MROH1Q8NDA8 1641 aa24.95■■□□□ 1.59
CNEP1R1-203ENST00000458059 RWDD1Q9H446 243 aaPredicted RBP24.95■■□□□ 1.58
CNEP1R1-203ENST00000458059 UHRF1BP1LA0JNW5 1464 aa24.95■■□□□ 1.58
CNEP1R1-203ENST00000458059 FBLN1P23142 703 aa24.95■■□□□ 1.58
CNEP1R1-203ENST00000458059 NGEFQ8N5V2 710 aa24.95■■□□□ 1.58
CNEP1R1-203ENST00000458059 INO80Q9ULG1 1556 aaPredicted RBP24.94■■□□□ 1.58
CNEP1R1-203ENST00000458059 PPRC1Q5VV67 1664 aaKnown RBP24.94■■□□□ 1.58
CNEP1R1-203ENST00000458059 WDR63Q8IWG1 891 aa24.94■■□□□ 1.58
CNEP1R1-203ENST00000458059 MYH16Q9H6N6 1097 aa24.94■■□□□ 1.58
CNEP1R1-203ENST00000458059 TBC1D2Q9BYX2 928 aa24.93■■□□□ 1.58
CNEP1R1-203ENST00000458059 GZF1Q9H116 711 aaPredicted RBP24.93■■□□□ 1.58
CNEP1R1-203ENST00000458059 DZIP1LQ8IYY4 767 aaKnown RBP24.93■■□□□ 1.58
CNEP1R1-203ENST00000458059 VWDEQ8N2E2 1590 aa24.93■■□□□ 1.58
CNEP1R1-203ENST00000458059 MVPQ14764 893 aaKnown RBP24.93■■□□□ 1.58
CNEP1R1-203ENST00000458059 ZKSCAN2Q63HK3 967 aa24.93■■□□□ 1.58
CNEP1R1-203ENST00000458059 MINK1Q8N4C8 1332 aaPredicted RBP24.92■■□□□ 1.58
CNEP1R1-203ENST00000458059 EFCAB6Q5THR3 1501 aa24.92■■□□□ 1.58
CNEP1R1-203ENST00000458059 NPATQ14207 1427 aa24.92■■□□□ 1.58
CNEP1R1-203ENST00000458059 SHPRHQ149N8 1683 aa24.92■■□□□ 1.58
CNEP1R1-203ENST00000458059 KIAA1210Q9ULL0 1709 aa24.91■■□□□ 1.58
CNEP1R1-203ENST00000458059 RAPGEF3O95398 923 aa24.91■■□□□ 1.58
CNEP1R1-203ENST00000458059 EVC2Q86UK5 1308 aa24.9■■□□□ 1.58
CNEP1R1-203ENST00000458059 SSH1Q8WYL5 1049 aa24.9■■□□□ 1.58
CNEP1R1-203ENST00000458059 ASXL2Q76L83 1435 aa24.9■■□□□ 1.58
CNEP1R1-203ENST00000458059 EIF5BO60841 1220 aaKnown RBP24.89■■□□□ 1.58
CNEP1R1-203ENST00000458059 PHF23Q9BUL5 403 aaPredicted RBP24.89■■□□□ 1.58
CNEP1R1-203ENST00000458059 NINLQ9Y2I6 1382 aa24.89■■□□□ 1.57
CNEP1R1-203ENST00000458059 TRIM27P14373 513 aa24.89■■□□□ 1.57
CNEP1R1-203ENST00000458059 TBC1D32Q96NH3 1257 aa24.89■■□□□ 1.57
CNEP1R1-203ENST00000458059 ZNF518AQ6AHZ1 1483 aa24.88■■□□□ 1.57
CNEP1R1-203ENST00000458059 QRICH2Q9H0J4 1663 aa24.87■■□□□ 1.57
CNEP1R1-203ENST00000458059 SBNO2Q9Y2G9 1366 aa24.87■■□□□ 1.57
CNEP1R1-203ENST00000458059 NOB1Q9ULX3 412 aaKnown RBP24.87■■□□□ 1.57
CNEP1R1-203ENST00000458059 NLRP1Q9C000 1473 aa24.87■■□□□ 1.57
CNEP1R1-203ENST00000458059 IQSEC2Q5JU85 1478 aa24.86■■□□□ 1.57
CNEP1R1-203ENST00000458059 TMPOP42166 694 aaKnown RBP24.85■■□□□ 1.57
CNEP1R1-203ENST00000458059 ABCA9Q8IUA7 1624 aa24.84■■□□□ 1.57
CNEP1R1-203ENST00000458059 RIPK4P57078 832 aa24.84■■□□□ 1.57
CNEP1R1-203ENST00000458059 KIDINS220Q9ULH0 1771 aa24.83■■□□□ 1.57
CNEP1R1-203ENST00000458059 NPM1P06748 294 aaKnown RBP eCLIP24.83■■□□□ 1.57
CNEP1R1-203ENST00000458059 TMEM57Q8N5G2 664 aa24.83■■□□□ 1.57
CNEP1R1-203ENST00000458059 TRIM35Q9UPQ4 493 aa24.82■■□□□ 1.56
CNEP1R1-203ENST00000458059 ANTXR1Q9H6X2 564 aa24.82■■□□□ 1.56
CNEP1R1-203ENST00000458059 ELL2O00472 640 aaPredicted RBP24.81■■□□□ 1.56
CNEP1R1-203ENST00000458059 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.81■■□□□ 1.56
CNEP1R1-203ENST00000458059 C22orf23Q9BZE7 217 aa24.81■■□□□ 1.56
CNEP1R1-203ENST00000458059 NRXN1Q9ULB1 1477 aa24.81■■□□□ 1.56
CNEP1R1-203ENST00000458059 LNPKQ9C0E8 428 aa24.81■■□□□ 1.56
CNEP1R1-203ENST00000458059 A0A1W2PP64 1363 aa24.81■■□□□ 1.56
CNEP1R1-203ENST00000458059 IFT172Q9UG01 1749 aa24.81■■□□□ 1.56
CNEP1R1-203ENST00000458059 ADGRB3O60242 1522 aa24.81■■□□□ 1.56
CNEP1R1-203ENST00000458059 THUMPD2Q9BTF0 503 aaKnown RBP24.81■■□□□ 1.56
CNEP1R1-203ENST00000458059 IDI1Q13907 227 aa24.8■■□□□ 1.56
CNEP1R1-203ENST00000458059 ARAP3Q8WWN8 1544 aa24.8■■□□□ 1.56
CNEP1R1-203ENST00000458059 CCDC27Q2M243 656 aa24.8■■□□□ 1.56
CNEP1R1-203ENST00000458059 VIRMAQ69YN4 1812 aaKnown RBP24.79■■□□□ 1.56
CNEP1R1-203ENST00000458059 C1orf115Q9H7X2 142 aa24.79■■□□□ 1.56
CNEP1R1-203ENST00000458059 ANKRD36BQ8N2N9 1353 aa24.79■■□□□ 1.56
CNEP1R1-203ENST00000458059 ADGRB1O14514 1584 aa24.79■■□□□ 1.56
CNEP1R1-203ENST00000458059 VGFO15240 615 aaPredicted RBP24.79■■□□□ 1.56
CNEP1R1-203ENST00000458059 PRAM1Q96QH2 718 aa24.78■■□□□ 1.56
CNEP1R1-203ENST00000458059 ATF7IPQ6VMQ6 1270 aa24.78■■□□□ 1.56
CNEP1R1-203ENST00000458059 CD109Q6YHK3 1445 aa24.78■■□□□ 1.56
CNEP1R1-203ENST00000458059 FYB1O15117 783 aa24.76■■□□□ 1.55
CNEP1R1-203ENST00000458059 HMOX1P09601 288 aa24.76■■□□□ 1.55
CNEP1R1-203ENST00000458059 TULP4Q9NRJ4 1543 aa24.76■■□□□ 1.55
CNEP1R1-203ENST00000458059 PLEKHF1Q96S99 279 aa24.75■■□□□ 1.55
CNEP1R1-203ENST00000458059 FOXD4L1Q9NU39 408 aa24.75■■□□□ 1.55
CNEP1R1-203ENST00000458059 MYO3AQ8NEV4 1616 aa24.75■■□□□ 1.55
CNEP1R1-203ENST00000458059 DDX19BQ9UMR2 479 aa24.73■■□□□ 1.55
CNEP1R1-203ENST00000458059 CABP1Q9NZU7 370 aa24.72■■□□□ 1.55
CNEP1R1-203ENST00000458059 PPLO60437 1756 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms