RNA–Protein interactions for RNA: ENST00000458034.1

RFX3-211, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-211ENST00000458034 DIP2CQ9Y2E4 1556 aa14.34□□□□□ -0.11
RFX3-211ENST00000458034 ADGRB1O14514 1584 aa14.34□□□□□ -0.11
RFX3-211ENST00000458034 GLI2P10070 1586 aa14.34□□□□□ -0.11
RFX3-211ENST00000458034 POLR3AO14802 1390 aaPredicted RBP14.34□□□□□ -0.11
RFX3-211ENST00000458034 RICTORQ6R327 1708 aa14.33□□□□□ -0.12
RFX3-211ENST00000458034 DUSP27Q5VZP5 1158 aa14.33□□□□□ -0.12
RFX3-211ENST00000458034 PUS7Q96PZ0 661 aaKnown RBP14.33□□□□□ -0.12
RFX3-211ENST00000458034 CRBNQ96SW2 442 aa14.33□□□□□ -0.12
RFX3-211ENST00000458034 C14orf93Q9H972 538 aaKnown RBP14.33□□□□□ -0.12
RFX3-211ENST00000458034 ARHGEF28Q8N1W1 1705 aaKnown RBP14.32□□□□□ -0.12
RFX3-211ENST00000458034 IPO9Q96P70 1041 aaKnown RBP14.32□□□□□ -0.12
RFX3-211ENST00000458034 SIGLEC1Q9BZZ2 1709 aa14.32□□□□□ -0.12
RFX3-211ENST00000458034 ARHGAP31Q2M1Z3 1444 aa14.32□□□□□ -0.12
RFX3-211ENST00000458034 SLFN5Q08AF3 891 aa14.31□□□□□ -0.12
RFX3-211ENST00000458034 NKTRP30414 1462 aaKnown RBP14.31□□□□□ -0.12
RFX3-211ENST00000458034 NEXMIFQ5QGS0 1516 aa14.31□□□□□ -0.12
RFX3-211ENST00000458034 E9PSI1 815 aa14.3□□□□□ -0.12
RFX3-211ENST00000458034 GGT6Q6P531 493 aa14.3□□□□□ -0.12
RFX3-211ENST00000458034 NSD3Q9BZ95 1437 aa14.3□□□□□ -0.12
RFX3-211ENST00000458034 SHPRHQ149N8 1683 aa14.3□□□□□ -0.12
RFX3-211ENST00000458034 NSD2O96028 1365 aa14.29□□□□□ -0.12
RFX3-211ENST00000458034 NINLQ9Y2I6 1382 aa14.29□□□□□ -0.12
RFX3-211ENST00000458034 VGFO15240 615 aaPredicted RBP14.28□□□□□ -0.12
RFX3-211ENST00000458034 CENPQQ7L2Z9 268 aaPredicted RBP14.28□□□□□ -0.12
RFX3-211ENST00000458034 TRMT2AQ8IZ69 625 aaKnown RBP14.28□□□□□ -0.12
RFX3-211ENST00000458034 ZBTB47Q9UFB7 747 aaPredicted RBP14.28□□□□□ -0.12
RFX3-211ENST00000458034 ZFYVE9O95405 1425 aa14.27□□□□□ -0.12
RFX3-211ENST00000458034 PLIN1O60240 522 aa14.27□□□□□ -0.13
RFX3-211ENST00000458034 MORC1Q86VD1 984 aa14.27□□□□□ -0.13
RFX3-211ENST00000458034 CARD14Q9BXL6 1004 aa14.27□□□□□ -0.13
RFX3-211ENST00000458034 TRAK1Q9UPV9 953 aa14.27□□□□□ -0.13
RFX3-211ENST00000458034 PREX1Q8TCU6 1659 aa14.26□□□□□ -0.13
RFX3-211ENST00000458034 EVC2Q86UK5 1308 aa14.26□□□□□ -0.13
RFX3-211ENST00000458034 PDE4AP27815 886 aa14.26□□□□□ -0.13
RFX3-211ENST00000458034 SP7Q8TDD2 431 aaPredicted RBP14.26□□□□□ -0.13
RFX3-211ENST00000458034 CFAP53Q96M91 514 aa14.26□□□□□ -0.13
RFX3-211ENST00000458034 CGNL1Q0VF96 1302 aa14.25□□□□□ -0.13
RFX3-211ENST00000458034 APAF1O14727 1248 aa14.25□□□□□ -0.13
RFX3-211ENST00000458034 CCDC146Q8IYE0 955 aa14.25□□□□□ -0.13
RFX3-211ENST00000458034 BACH2Q9BYV9 841 aa14.25□□□□□ -0.13
RFX3-211ENST00000458034 ANKRD26Q9UPS8 1709 aa14.24□□□□□ -0.13
RFX3-211ENST00000458034 ANKRD36BQ8N2N9 1353 aa14.23□□□□□ -0.13
RFX3-211ENST00000458034 MYO5BQ9ULV0 1848 aa14.23□□□□□ -0.13
RFX3-211ENST00000458034 DDRGK1Q96HY6 314 aa14.23□□□□□ -0.13
RFX3-211ENST00000458034 SLC52A1Q9NWF4 448 aa14.23□□□□□ -0.13
RFX3-211ENST00000458034 TULP4Q9NRJ4 1543 aa14.23□□□□□ -0.13
RFX3-211ENST00000458034 KDM2BQ8NHM5 1336 aa14.22□□□□□ -0.13
RFX3-211ENST00000458034 RUNDC1Q96C34 613 aa14.22□□□□□ -0.13
RFX3-211ENST00000458034 CLTCQ00610 1675 aaKnown RBP14.22□□□□□ -0.13
RFX3-211ENST00000458034 IQSEC2Q5JU85 1478 aa14.21□□□□□ -0.13
RFX3-211ENST00000458034 MYCNP04198 464 aaPredicted RBP14.21□□□□□ -0.13
RFX3-211ENST00000458034 TMEM131LA2VDJ0 1609 aa14.2□□□□□ -0.14
RFX3-211ENST00000458034 C20orf194Q5TEA3 1177 aa14.19□□□□□ -0.14
RFX3-211ENST00000458034 VIRMAQ69YN4 1812 aaKnown RBP14.19□□□□□ -0.14
RFX3-211ENST00000458034 REREQ9P2R6 1566 aa14.18□□□□□ -0.14
RFX3-211ENST00000458034 AAMPQ13685 434 aa14.18□□□□□ -0.14
RFX3-211ENST00000458034 PDE3AQ14432 1141 aa14.18□□□□□ -0.14
RFX3-211ENST00000458034 TMEM132EQ6IEE7 984 aa14.18□□□□□ -0.14
RFX3-211ENST00000458034 SLC12A5Q9H2X9 1139 aa14.18□□□□□ -0.14
RFX3-211ENST00000458034 PAK3O75914 559 aaPredicted RBP14.17□□□□□ -0.14
RFX3-211ENST00000458034 RAPGEF3O95398 923 aa14.17□□□□□ -0.14
RFX3-211ENST00000458034 RTL5Q5HYW3 569 aaPredicted RBP14.17□□□□□ -0.14
RFX3-211ENST00000458034 NPM2Q86SE8 214 aaKnown RBP14.17□□□□□ -0.14
RFX3-211ENST00000458034 WDR63Q8IWG1 891 aa14.17□□□□□ -0.14
RFX3-211ENST00000458034 ATAD2Q6PL18 1390 aa14.17□□□□□ -0.14
RFX3-211ENST00000458034 ADGRB2O60241 1585 aa14.17□□□□□ -0.14
RFX3-211ENST00000458034 CANXP27824 592 aaKnown RBP14.16□□□□□ -0.14
RFX3-211ENST00000458034 CCDC27Q2M243 656 aa14.16□□□□□ -0.14
RFX3-211ENST00000458034 WWC1Q8IX03 1113 aa14.16□□□□□ -0.14
RFX3-211ENST00000458034 KIF20BQ96Q89 1820 aa14.15□□□□□ -0.14
RFX3-211ENST00000458034 MED14O60244 1454 aa14.15□□□□□ -0.14
RFX3-211ENST00000458034 YEATS2Q9ULM3 1422 aa14.15□□□□□ -0.14
RFX3-211ENST00000458034 IDI1Q13907 227 aa14.14□□□□□ -0.15
RFX3-211ENST00000458034 FAM161AQ3B820 660 aa14.14□□□□□ -0.15
RFX3-211ENST00000458034 AKT1S1Q96B36 256 aa14.14□□□□□ -0.15
RFX3-211ENST00000458034 ABCC11Q96J66 1382 aa14.13□□□□□ -0.15
RFX3-211ENST00000458034 MTHFSP49914 203 aa14.13□□□□□ -0.15
RFX3-211ENST00000458034 AGLP35573 1532 aa14.13□□□□□ -0.15
RFX3-211ENST00000458034 PTPRMP28827 1452 aa14.12□□□□□ -0.15
RFX3-211ENST00000458034 MYH16Q9H6N6 1097 aa14.12□□□□□ -0.15
RFX3-211ENST00000458034 TERF2IPQ9NYB0 399 aa14.12□□□□□ -0.15
RFX3-211ENST00000458034 DLC1Q96QB1 1528 aa14.11□□□□□ -0.15
RFX3-211ENST00000458034 PPM1GO15355 546 aaPredicted RBP14.11□□□□□ -0.15
RFX3-211ENST00000458034 TNNT2P45379 298 aaPredicted RBP14.11□□□□□ -0.15
RFX3-211ENST00000458034 TCP11L2Q8N4U5 519 aa14.11□□□□□ -0.15
RFX3-211ENST00000458034 YTHDC2Q9H6S0 1430 aaKnown RBP14.11□□□□□ -0.15
RFX3-211ENST00000458034 ALKQ9UM73 1620 aa14.11□□□□□ -0.15
RFX3-211ENST00000458034 DIP2BQ9P265 1576 aa14.1□□□□□ -0.15
RFX3-211ENST00000458034 BCAR3O75815 825 aa14.1□□□□□ -0.15
RFX3-211ENST00000458034 CT47B1P0C2W7 299 aaPredicted RBP14.1□□□□□ -0.15
RFX3-211ENST00000458034 SRPK2P78362 688 aaKnown RBP14.1□□□□□ -0.15
RFX3-211ENST00000458034 PNNQ9H307 717 aaKnown RBP14.1□□□□□ -0.15
RFX3-211ENST00000458034 CABP2Q9NPB3 220 aa14.1□□□□□ -0.15
RFX3-211ENST00000458034 MAPK8IP3Q9UPT6 1336 aa14.1□□□□□ -0.15
RFX3-211ENST00000458034 A0A1W2PP64 1363 aa14.09□□□□□ -0.15
RFX3-211ENST00000458034 NBR1Q14596 966 aa14.09□□□□□ -0.15
RFX3-211ENST00000458034 HDGFL2Q7Z4V5 671 aaPredicted RBP14.09□□□□□ -0.15
RFX3-211ENST00000458034 POGKQ9P215 609 aa14.09□□□□□ -0.15
RFX3-211ENST00000458034 NUTM2DQ5VT03 806 aaPredicted RBP14.08□□□□□ -0.16
RFX3-211ENST00000458034 PMFBP1Q8TBY8 1022 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms