RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 NALCNQ8IZF0 1738 aa21.85■■□□□ 1.09
UPF3AP2-201ENST00000457924 C8orf37Q96NL8 207 aa21.84■■□□□ 1.09
UPF3AP2-201ENST00000457924 NEXMIFQ5QGS0 1516 aa21.84■■□□□ 1.09
UPF3AP2-201ENST00000457924 KIF1BO60333 1816 aa21.83■■□□□ 1.09
UPF3AP2-201ENST00000457924 DDX17Q92841 729 aaKnown RBP21.83■■□□□ 1.09
UPF3AP2-201ENST00000457924 CLTCL1P53675 1640 aa21.83■■□□□ 1.08
UPF3AP2-201ENST00000457924 PNPLA6Q8IY17 1366 aa21.83■■□□□ 1.08
UPF3AP2-201ENST00000457924 QTRT2Q9H974 415 aaKnown RBP21.82■■□□□ 1.08
UPF3AP2-201ENST00000457924 RBM6P78332 1123 aaKnown RBP21.81■■□□□ 1.08
UPF3AP2-201ENST00000457924 ABCB7O75027 752 aa21.79■■□□□ 1.08
UPF3AP2-201ENST00000457924 PPARGC1BQ86YN6 1023 aaKnown RBP21.79■■□□□ 1.08
UPF3AP2-201ENST00000457924 C1orf167Q5SNV9 1468 aa21.78■■□□□ 1.08
UPF3AP2-201ENST00000457924 RGS12O14924 1447 aa21.78■■□□□ 1.08
UPF3AP2-201ENST00000457924 NGLY1Q96IV0 654 aa21.77■■□□□ 1.08
UPF3AP2-201ENST00000457924 VGFO15240 615 aaPredicted RBP21.76■■□□□ 1.07
UPF3AP2-201ENST00000457924 ADAMTS2O95450 1211 aa21.76■■□□□ 1.07
UPF3AP2-201ENST00000457924 PTCH1Q13635 1447 aa21.76■■□□□ 1.07
UPF3AP2-201ENST00000457924 POLA2Q14181 598 aa21.76■■□□□ 1.07
UPF3AP2-201ENST00000457924 LAMC1P11047 1609 aa21.75■■□□□ 1.07
UPF3AP2-201ENST00000457924 ORAI2Q96SN7 254 aa21.72■■□□□ 1.07
UPF3AP2-201ENST00000457924 SOS2Q07890 1332 aaPredicted RBP21.72■■□□□ 1.07
UPF3AP2-201ENST00000457924 ROBO2Q9HCK4 1378 aa21.72■■□□□ 1.07
UPF3AP2-201ENST00000457924 USP21Q9UK80 565 aa21.7■■□□□ 1.06
UPF3AP2-201ENST00000457924 RPGRIP1LQ68CZ1 1315 aa21.69■■□□□ 1.06
UPF3AP2-201ENST00000457924 NAIPQ13075 1403 aa21.69■■□□□ 1.06
UPF3AP2-201ENST00000457924 TRPC5Q9UL62 973 aaPredicted RBP21.68■■□□□ 1.06
UPF3AP2-201ENST00000457924 PRAG1Q86YV5 1406 aa21.68■■□□□ 1.06
UPF3AP2-201ENST00000457924 HFM1A2PYH4 1435 aa21.67■■□□□ 1.06
UPF3AP2-201ENST00000457924 ATAD2Q6PL18 1390 aa21.67■■□□□ 1.06
UPF3AP2-201ENST00000457924 RRBP1Q9P2E9 1410 aaKnown RBP21.65■■□□□ 1.06
UPF3AP2-201ENST00000457924 PPLO60437 1756 aa21.65■■□□□ 1.06
UPF3AP2-201ENST00000457924 COL22A1Q8NFW1 1626 aaPredicted RBP21.65■■□□□ 1.06
UPF3AP2-201ENST00000457924 FNBP4Q8N3X1 1017 aaPredicted RBP21.64■■□□□ 1.05
UPF3AP2-201ENST00000457924 NPHP3Q7Z494 1330 aa21.62■■□□□ 1.05
UPF3AP2-201ENST00000457924 ESCO1Q5FWF5 840 aa21.62■■□□□ 1.05
UPF3AP2-201ENST00000457924 CDC42BPGQ6DT37 1551 aa21.61■■□□□ 1.05
UPF3AP2-201ENST00000457924 ATRNO75882 1429 aa21.6■■□□□ 1.05
UPF3AP2-201ENST00000457924 MYOM2P54296 1465 aa21.58■■□□□ 1.04
UPF3AP2-201ENST00000457924 MARF1Q9Y4F3 1742 aaKnown RBP21.58■■□□□ 1.04
UPF3AP2-201ENST00000457924 PXDNQ92626 1479 aa21.57■■□□□ 1.04
UPF3AP2-201ENST00000457924 FOXO3O43524 673 aa21.56■■□□□ 1.04
UPF3AP2-201ENST00000457924 LRPPRCP42704 1394 aaKnown RBP21.56■■□□□ 1.04
UPF3AP2-201ENST00000457924 XPCQ01831 940 aaPredicted RBP21.54■■□□□ 1.04
UPF3AP2-201ENST00000457924 BCL9LQ86UU0 1499 aa21.53■■□□□ 1.04
UPF3AP2-201ENST00000457924 STK26Q9P289 416 aa21.53■■□□□ 1.04
UPF3AP2-201ENST00000457924 ZRANB1Q9UGI0 708 aa21.53■■□□□ 1.04
UPF3AP2-201ENST00000457924 ADGRF5Q8IZF2 1346 aa21.53■■□□□ 1.04
UPF3AP2-201ENST00000457924 CCDC125Q86Z20 511 aa21.52■■□□□ 1.04
UPF3AP2-201ENST00000457924 NUTM2FA1L443 756 aa21.51■■□□□ 1.03
UPF3AP2-201ENST00000457924 WAPLQ7Z5K2 1190 aa21.51■■□□□ 1.03
UPF3AP2-201ENST00000457924 GJD4Q96KN9 370 aaPredicted RBP21.51■■□□□ 1.03
UPF3AP2-201ENST00000457924 CCDC144AA2RUR9 1427 aa21.51■■□□□ 1.03
UPF3AP2-201ENST00000457924 TECPR2O15040 1411 aa21.5■■□□□ 1.03
UPF3AP2-201ENST00000457924 RGL3Q3MIN7 710 aa21.49■■□□□ 1.03
UPF3AP2-201ENST00000457924 ANKRD30BQ9BXX2 1392 aa21.48■■□□□ 1.03
UPF3AP2-201ENST00000457924 KNDC1Q76NI1 1749 aa21.48■■□□□ 1.03
UPF3AP2-201ENST00000457924 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.48■■□□□ 1.03
UPF3AP2-201ENST00000457924 IFT172Q9UG01 1749 aa21.47■■□□□ 1.03
UPF3AP2-201ENST00000457924 ABCC11Q96J66 1382 aa21.47■■□□□ 1.03
UPF3AP2-201ENST00000457924 KIF1AQ12756 1690 aa21.47■■□□□ 1.03
UPF3AP2-201ENST00000457924 UNC5CLQ8IV45 518 aa21.46■■□□□ 1.03
UPF3AP2-201ENST00000457924 FMN2Q9NZ56 1722 aa21.46■■□□□ 1.03
UPF3AP2-201ENST00000457924 TMEM132EQ6IEE7 984 aa21.45■■□□□ 1.02
UPF3AP2-201ENST00000457924 SPATA31A3Q5VYP0 1347 aa21.45■■□□□ 1.02
UPF3AP2-201ENST00000457924 PLEKHH1Q9ULM0 1364 aa21.45■■□□□ 1.02
UPF3AP2-201ENST00000457924 SPATA31E1Q6ZUB1 1445 aa21.45■■□□□ 1.02
UPF3AP2-201ENST00000457924 SLIT2O94813 1529 aa21.43■■□□□ 1.02
UPF3AP2-201ENST00000457924 PIK3C2GO75747 1445 aa21.42■■□□□ 1.02
UPF3AP2-201ENST00000457924 KRT28Q7Z3Y7 464 aa21.42■■□□□ 1.02
UPF3AP2-201ENST00000457924 RALGAPBQ86X10 1494 aa21.42■■□□□ 1.02
UPF3AP2-201ENST00000457924 EP400Q96L91 3159 aa21.41■■□□□ 1.02
UPF3AP2-201ENST00000457924 YTHDC2Q9H6S0 1430 aaKnown RBP21.41■■□□□ 1.02
UPF3AP2-201ENST00000457924 USP32Q8NFA0 1604 aa21.4■■□□□ 1.02
UPF3AP2-201ENST00000457924 GLI3P10071 1580 aa21.4■■□□□ 1.02
UPF3AP2-201ENST00000457924 HAP1P54257 671 aaPredicted RBP21.4■■□□□ 1.02
UPF3AP2-201ENST00000457924 MPHOSPH9Q99550 1183 aa21.4■■□□□ 1.02
UPF3AP2-201ENST00000457924 SIRT1Q96EB6 747 aa21.39■■□□□ 1.01
UPF3AP2-201ENST00000457924 SRCAPQ6ZRS2 3230 aa21.38■■□□□ 1.01
UPF3AP2-201ENST00000457924 BLMP54132 1417 aaPredicted RBP21.38■■□□□ 1.01
UPF3AP2-201ENST00000457924 RGPD8O14715 1765 aaPredicted RBP21.38■■□□□ 1.01
UPF3AP2-201ENST00000457924 PSME1Q06323 249 aa21.38■■□□□ 1.01
UPF3AP2-201ENST00000457924 BRWD3Q6RI45 1802 aa21.37■■□□□ 1.01
UPF3AP2-201ENST00000457924 PHF8Q9UPP1 1060 aa21.37■■□□□ 1.01
UPF3AP2-201ENST00000457924 ZBTB12Q9Y330 459 aaPredicted RBP21.36■■□□□ 1.01
UPF3AP2-201ENST00000457924 TNS3Q68CZ2 1445 aa21.36■■□□□ 1.01
UPF3AP2-201ENST00000457924 SF3B2Q13435 895 aaKnown RBP21.35■■□□□ 1.01
UPF3AP2-201ENST00000457924 MKRN4PQ13434 485 aaPredicted RBP21.34■■□□□ 1.01
UPF3AP2-201ENST00000457924 VPS72Q15906 364 aa21.34■■□□□ 1.01
UPF3AP2-201ENST00000457924 SEPT12Q8IYM1 358 aa21.34■■□□□ 1.01
UPF3AP2-201ENST00000457924 C14orf93Q9H972 538 aaKnown RBP21.34■■□□□ 1.01
UPF3AP2-201ENST00000457924 DHX57Q6P158 1386 aaKnown RBP21.34■■□□□ 1.01
UPF3AP2-201ENST00000457924 NWD2Q9ULI1 1742 aa21.33■■□□□ 1.01
UPF3AP2-201ENST00000457924 PLEKHG5O94827 1062 aa21.33■■□□□ 1.01
UPF3AP2-201ENST00000457924 CABLES1Q8TDN4 633 aa21.33■■□□□ 1.01
UPF3AP2-201ENST00000457924 CCDC9Q9Y3X0 531 aaKnown RBP21.33■■□□□ 1.01
UPF3AP2-201ENST00000457924 PLCH1Q4KWH8 1693 aa21.33■■□□□ 1
UPF3AP2-201ENST00000457924 LMOD2Q6P5Q4 547 aa21.32■■□□□ 1
UPF3AP2-201ENST00000457924 SBNO1A3KN83 1393 aa21.32■■□□□ 1
UPF3AP2-201ENST00000457924 DEFB132Q7Z7B7 95 aa21.31■■□□□ 1
UPF3AP2-201ENST00000457924 ARHGEF10O15013 1369 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms