RNA–Protein interactions for RNA: ENST00000457888.2

UBDP1-202, Transcript of ubiquitin D pseudogene 1, humanhuman

BASIC

Gene UBDP1, Length 382 nt, Biotype unprocessed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBDP1-202ENST00000457888 SMYD5Q6GMV2 418 aa9.33□□□□□ -0.92
UBDP1-202ENST00000457888 GPR37O15354 613 aa9.32□□□□□ -0.92
UBDP1-202ENST00000457888 SMPD1P17405 629 aa9.32□□□□□ -0.92
UBDP1-202ENST00000457888 RNF19BQ6ZMZ0 732 aa9.32□□□□□ -0.92
UBDP1-202ENST00000457888 SNIP1Q8TAD8 396 aaKnown RBP9.32□□□□□ -0.92
UBDP1-202ENST00000457888 GRIPAP1Q4V328 841 aa9.31□□□□□ -0.92
UBDP1-202ENST00000457888 WIPF1O43516 503 aa9.3□□□□□ -0.92
UBDP1-202ENST00000457888 TRIM32Q13049 653 aa9.3□□□□□ -0.92
UBDP1-202ENST00000457888 PHOX2BQ99453 314 aa9.3□□□□□ -0.92
UBDP1-202ENST00000457888 ATP13A2Q9NQ11 1180 aa9.3□□□□□ -0.92
UBDP1-202ENST00000457888 STK17AQ9UEE5 414 aa9.3□□□□□ -0.92
UBDP1-202ENST00000457888 Q3C1V9 767 aa9.29□□□□□ -0.92
UBDP1-202ENST00000457888 INSM1Q01101 510 aaPredicted RBP9.28□□□□□ -0.92
UBDP1-202ENST00000457888 MRGPRX2Q96LB1 330 aa9.28□□□□□ -0.92
UBDP1-202ENST00000457888 SNRPBP14678 240 aaKnown RBP9.27□□□□□ -0.93
UBDP1-202ENST00000457888 MMP16P51512 607 aa9.27□□□□□ -0.93
UBDP1-202ENST00000457888 J3QL48 77 aa9.26□□□□□ -0.93
UBDP1-202ENST00000457888 TRIM47Q96LD4 638 aa9.26□□□□□ -0.93
UBDP1-202ENST00000457888 SENP2Q9HC62 589 aa9.26□□□□□ -0.93
UBDP1-202ENST00000457888 TERTO14746 1132 aaKnown RBP9.24□□□□□ -0.93
UBDP1-202ENST00000457888 REPIN1Q9BWE0 567 aaKnown RBP9.24□□□□□ -0.93
UBDP1-202ENST00000457888 DXOO77932 396 aaKnown RBP9.23□□□□□ -0.93
UBDP1-202ENST00000457888 HPS1Q92902 700 aa9.23□□□□□ -0.93
UBDP1-202ENST00000457888 USB1Q9BQ65 265 aaKnown RBP9.23□□□□□ -0.93
UBDP1-202ENST00000457888 LCE2CQ5TA81 110 aa9.22□□□□□ -0.93
UBDP1-202ENST00000457888 CD46P15529 392 aa9.21□□□□□ -0.94
UBDP1-202ENST00000457888 KIFC2Q96AC6 838 aa9.21□□□□□ -0.94
UBDP1-202ENST00000457888 KDM4AO75164 1064 aa9.2□□□□□ -0.94
UBDP1-202ENST00000457888 RC3H1Q5TC82 1133 aaKnown RBP9.2□□□□□ -0.94
UBDP1-202ENST00000457888 GPIHBP1Q8IV16 184 aa9.2□□□□□ -0.94
UBDP1-202ENST00000457888 CCDC24Q8N4L8 307 aa9.2□□□□□ -0.94
UBDP1-202ENST00000457888 WNT7BP56706 349 aa9.18□□□□□ -0.94
UBDP1-202ENST00000457888 SKOR1P84550 965 aa9.17□□□□□ -0.94
UBDP1-202ENST00000457888 USP46P62068 366 aa9.16□□□□□ -0.94
UBDP1-202ENST00000457888 HLA-CQ95604 372 aa9.15□□□□□ -0.94
UBDP1-202ENST00000457888 ALDH1A1P00352 501 aa9.14□□□□□ -0.95
UBDP1-202ENST00000457888 SLC16A10Q8TF71 515 aa9.13□□□□□ -0.95
UBDP1-202ENST00000457888 HOXA2O43364 376 aa9.12□□□□□ -0.95
UBDP1-202ENST00000457888 JUNDP17535 347 aa9.12□□□□□ -0.95
UBDP1-202ENST00000457888 MAP2K5Q13163 448 aa9.12□□□□□ -0.95
UBDP1-202ENST00000457888 MDM2Q00987 491 aaPredicted RBP9.11□□□□□ -0.95
UBDP1-202ENST00000457888 NISCHQ9Y2I1 1504 aa9.1□□□□□ -0.95
UBDP1-202ENST00000457888 NXF1Q9UBU9 619 aaKnown RBP9.1□□□□□ -0.95
UBDP1-202ENST00000457888 FAM181BA6NEQ2 426 aa9.09□□□□□ -0.95
UBDP1-202ENST00000457888 SIAH2O43255 324 aa9.08□□□□□ -0.96
UBDP1-202ENST00000457888 BMP1P13497 986 aa9.08□□□□□ -0.96
UBDP1-202ENST00000457888 GUCA2AQ02747 115 aa9.08□□□□□ -0.96
UBDP1-202ENST00000457888 TRIM46Q7Z4K8 759 aa9.08□□□□□ -0.96
UBDP1-202ENST00000457888 EHBP1Q8NDI1 1231 aa9.08□□□□□ -0.96
UBDP1-202ENST00000457888 NUDT12Q9BQG2 462 aa9.08□□□□□ -0.96
UBDP1-202ENST00000457888 IRF6O14896 467 aa9.07□□□□□ -0.96
UBDP1-202ENST00000457888 CAPN5O15484 640 aaPredicted RBP9.07□□□□□ -0.96
UBDP1-202ENST00000457888 GMPRP36959 345 aa9.07□□□□□ -0.96
UBDP1-202ENST00000457888 NPAS3Q8IXF0 933 aa9.07□□□□□ -0.96
UBDP1-202ENST00000457888 SYMPKQ92797 1274 aaKnown RBP9.07□□□□□ -0.96
UBDP1-202ENST00000457888 WASF2Q9Y6W5 498 aa9.07□□□□□ -0.96
UBDP1-202ENST00000457888 PTCRAQ6ISU1 281 aaPredicted RBP9.06□□□□□ -0.96
UBDP1-202ENST00000457888 IRF7Q92985 503 aa9.06□□□□□ -0.96
UBDP1-202ENST00000457888 RETREG3Q86VR2 466 aa9.05□□□□□ -0.96
UBDP1-202ENST00000457888 ZSCAN1Q8NBB4 408 aa9.04□□□□□ -0.96
UBDP1-202ENST00000457888 MINK1Q8N4C8 1332 aaPredicted RBP9.04□□□□□ -0.96
UBDP1-202ENST00000457888 NUTM1Q86Y26 1132 aa9.03□□□□□ -0.96
UBDP1-202ENST00000457888 H3BM21 787 aa9.02□□□□□ -0.97
UBDP1-202ENST00000457888 LORP23490 312 aaPredicted RBP9.02□□□□□ -0.97
UBDP1-202ENST00000457888 VEGFBP49765 207 aa9.02□□□□□ -0.97
UBDP1-202ENST00000457888 GPCPD1Q9NPB8 672 aa9.02□□□□□ -0.97
UBDP1-202ENST00000457888 CLCN1P35523 988 aa9.01□□□□□ -0.97
UBDP1-202ENST00000457888 SH3BP2P78314 561 aa9.01□□□□□ -0.97
UBDP1-202ENST00000457888 PLCB2Q00722 1185 aa9.01□□□□□ -0.97
UBDP1-202ENST00000457888 FAM217BQ9NTX9 383 aaPredicted RBP9.01□□□□□ -0.97
UBDP1-202ENST00000457888 CCNYL3P0C7X3 344 aa9□□□□□ -0.97
UBDP1-202ENST00000457888 CCDC102AQ96A19 550 aa9□□□□□ -0.97
UBDP1-202ENST00000457888 C6orf229H3BNL8 230 aa8.99□□□□□ -0.97
UBDP1-202ENST00000457888 FDX1P10109 184 aa8.99□□□□□ -0.97
UBDP1-202ENST00000457888 MS4A1P11836 297 aa8.99□□□□□ -0.97
UBDP1-202ENST00000457888 ERBB4Q15303 1308 aa8.99□□□□□ -0.97
UBDP1-202ENST00000457888 ZFP42Q96MM3 310 aa8.98□□□□□ -0.97
UBDP1-202ENST00000457888 PCDHGC3Q9UN70 934 aa8.98□□□□□ -0.97
UBDP1-202ENST00000457888 TULP1O00294 542 aaPredicted RBP8.97□□□□□ -0.97
UBDP1-202ENST00000457888 PTPRNQ16849 979 aa8.97□□□□□ -0.97
UBDP1-202ENST00000457888 UNC93B1Q9H1C4 597 aa8.97□□□□□ -0.97
UBDP1-202ENST00000457888 TLL2Q9Y6L7 1015 aa8.97□□□□□ -0.97
UBDP1-202ENST00000457888 LINC01559Q495D7 138 aa8.96□□□□□ -0.98
UBDP1-202ENST00000457888 KRI1Q8N9T8 703 aaKnown RBP8.96□□□□□ -0.98
UBDP1-202ENST00000457888 EVA1BQ9NVM1 165 aa8.96□□□□□ -0.98
UBDP1-202ENST00000457888 SLC24A1O60721 1099 aa8.95□□□□□ -0.98
UBDP1-202ENST00000457888 BAP1Q92560 729 aa8.95□□□□□ -0.98
UBDP1-202ENST00000457888 PLEKHG3A1L390 1219 aa8.94□□□□□ -0.98
UBDP1-202ENST00000457888 VARSP26640 1264 aaKnown RBP8.94□□□□□ -0.98
UBDP1-202ENST00000457888 NNTQ13423 1086 aa8.94□□□□□ -0.98
UBDP1-202ENST00000457888 KCNH2Q12809 1159 aa8.93□□□□□ -0.98
UBDP1-202ENST00000457888 SCARF1Q14162 830 aa8.93□□□□□ -0.98
UBDP1-202ENST00000457888 MRPL14Q6P1L8 145 aaKnown RBP8.93□□□□□ -0.98
UBDP1-202ENST00000457888 MPNDQ8N594 471 aa8.93□□□□□ -0.98
UBDP1-202ENST00000457888 ZNF511Q8NB15 262 aa8.93□□□□□ -0.98
UBDP1-202ENST00000457888 SPIRE2Q8WWL2 714 aa8.91□□□□□ -0.98
UBDP1-202ENST00000457888 PURBQ96QR8 312 aaKnown RBP8.91□□□□□ -0.98
UBDP1-202ENST00000457888 ADH1CP00326 375 aa8.9□□□□□ -0.98
UBDP1-202ENST00000457888 TIMP2P16035 220 aa8.9□□□□□ -0.98
UBDP1-202ENST00000457888 NDUFV2P19404 249 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms