RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 STK26Q9P289 416 aa12.24□□□□□ -0.45
RIF1-208ENST00000457745 SETD1BQ9UPS6 1966 aaKnown RBP12.24□□□□□ -0.45
RIF1-208ENST00000457745 TXNDC2Q86VQ3 553 aa12.23□□□□□ -0.45
RIF1-208ENST00000457745 POLR3GLQ9BT43 218 aa12.23□□□□□ -0.45
RIF1-208ENST00000457745 LRPPRCP42704 1394 aaKnown RBP12.22□□□□□ -0.45
RIF1-208ENST00000457745 CHRDL2Q6WN34 429 aa12.22□□□□□ -0.45
RIF1-208ENST00000457745 SLC26A8Q96RN1 970 aa12.22□□□□□ -0.45
RIF1-208ENST00000457745 ZBTB12Q9Y330 459 aaPredicted RBP12.22□□□□□ -0.45
RIF1-208ENST00000457745 DLC1Q96QB1 1528 aa12.21□□□□□ -0.45
RIF1-208ENST00000457745 CENPJQ9HC77 1338 aaPredicted RBP12.21□□□□□ -0.45
RIF1-208ENST00000457745 XRN1Q8IZH2 1706 aaKnown RBP12.21□□□□□ -0.45
RIF1-208ENST00000457745 SAFB2Q14151 953 aaKnown RBP eCLIP12.21□□□□□ -0.45
RIF1-208ENST00000457745 CPS1P31327 1500 aa12.21□□□□□ -0.46
RIF1-208ENST00000457745 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.2□□□□□ -0.46
RIF1-208ENST00000457745 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.2□□□□□ -0.46
RIF1-208ENST00000457745 ROBO2Q9HCK4 1378 aa12.19□□□□□ -0.46
RIF1-208ENST00000457745 SBNO2Q9Y2G9 1366 aa12.19□□□□□ -0.46
RIF1-208ENST00000457745 WAPLQ7Z5K2 1190 aa12.19□□□□□ -0.46
RIF1-208ENST00000457745 TECPR2O15040 1411 aa12.19□□□□□ -0.46
RIF1-208ENST00000457745 EIF3AQ14152 1382 aaKnown RBP12.18□□□□□ -0.46
RIF1-208ENST00000457745 THEMISQ8N1K5 641 aaPredicted RBP12.18□□□□□ -0.46
RIF1-208ENST00000457745 PRAM1Q96QH2 718 aa12.18□□□□□ -0.46
RIF1-208ENST00000457745 LMTK3Q96Q04 1460 aa12.18□□□□□ -0.46
RIF1-208ENST00000457745 NCKAP5LQ9HCH0 1330 aa12.17□□□□□ -0.46
RIF1-208ENST00000457745 ABCC11Q96J66 1382 aa12.17□□□□□ -0.46
RIF1-208ENST00000457745 MINK1Q8N4C8 1332 aaPredicted RBP12.16□□□□□ -0.46
RIF1-208ENST00000457745 HSPA2P54652 639 aa12.16□□□□□ -0.46
RIF1-208ENST00000457745 DIP2AQ14689 1571 aa12.16□□□□□ -0.46
RIF1-208ENST00000457745 TMF1P82094 1093 aa12.15□□□□□ -0.46
RIF1-208ENST00000457745 CCDC184Q52MB2 194 aa12.15□□□□□ -0.46
RIF1-208ENST00000457745 STRCP1A6NGW2 1772 aa12.15□□□□□ -0.46
RIF1-208ENST00000457745 STRCQ7RTU9 1775 aa12.15□□□□□ -0.46
RIF1-208ENST00000457745 CHD2O14647 1828 aaKnown RBP12.14□□□□□ -0.47
RIF1-208ENST00000457745 NPHP4O75161 1426 aaPredicted RBP12.14□□□□□ -0.47
RIF1-208ENST00000457745 BCANQ96GW7 911 aa12.14□□□□□ -0.47
RIF1-208ENST00000457745 PER1O15534 1290 aaPredicted RBP12.13□□□□□ -0.47
RIF1-208ENST00000457745 CABP2Q9NPB3 220 aa12.13□□□□□ -0.47
RIF1-208ENST00000457745 EID1Q9Y6B2 187 aa12.13□□□□□ -0.47
RIF1-208ENST00000457745 CNGB1Q14028 1251 aaPredicted RBP12.12□□□□□ -0.47
RIF1-208ENST00000457745 TBX22Q9Y458 520 aa12.12□□□□□ -0.47
RIF1-208ENST00000457745 USP32Q8NFA0 1604 aa12.11□□□□□ -0.47
RIF1-208ENST00000457745 ADGRB2O60241 1585 aa12.11□□□□□ -0.47
RIF1-208ENST00000457745 CD163L1Q9NR16 1453 aa12.11□□□□□ -0.47
RIF1-208ENST00000457745 CARD14Q9BXL6 1004 aa12.11□□□□□ -0.47
RIF1-208ENST00000457745 PANK3Q9H999 370 aa12.11□□□□□ -0.47
RIF1-208ENST00000457745 NALCNQ8IZF0 1738 aa12.11□□□□□ -0.47
RIF1-208ENST00000457745 FAM135BQ49AJ0 1406 aa12.11□□□□□ -0.47
RIF1-208ENST00000457745 NWD1Q149M9 1564 aa12.1□□□□□ -0.47
RIF1-208ENST00000457745 KCNA6P17658 529 aa12.1□□□□□ -0.47
RIF1-208ENST00000457745 HDGFP51858 240 aaKnown RBP12.1□□□□□ -0.47
RIF1-208ENST00000457745 ANKLE2Q86XL3 938 aa12.1□□□□□ -0.47
RIF1-208ENST00000457745 AMOTL2Q9Y2J4 779 aa12.1□□□□□ -0.47
RIF1-208ENST00000457745 PRR36Q9H6K5 1346 aa12.1□□□□□ -0.47
RIF1-208ENST00000457745 RBM33Q96EV2 1170 aaKnown RBP12.09□□□□□ -0.47
RIF1-208ENST00000457745 SLC12A5Q9H2X9 1139 aa12.09□□□□□ -0.47
RIF1-208ENST00000457745 POGKQ9P215 609 aa12.09□□□□□ -0.47
RIF1-208ENST00000457745 PTCH1Q13635 1447 aa12.09□□□□□ -0.47
RIF1-208ENST00000457745 TOPAZ1Q8N9V7 1692 aa12.09□□□□□ -0.47
RIF1-208ENST00000457745 PRKRIP1Q9H875 184 aaPredicted RBP12.08□□□□□ -0.48
RIF1-208ENST00000457745 RGPD8O14715 1765 aaPredicted RBP12.07□□□□□ -0.48
RIF1-208ENST00000457745 CDK19Q9BWU1 502 aa12.07□□□□□ -0.48
RIF1-208ENST00000457745 NKTRP30414 1462 aaKnown RBP12.07□□□□□ -0.48
RIF1-208ENST00000457745 ATP7BP35670 1465 aa12.07□□□□□ -0.48
RIF1-208ENST00000457745 SIRT1Q96EB6 747 aa12.06□□□□□ -0.48
RIF1-208ENST00000457745 EVC2Q86UK5 1308 aa12.06□□□□□ -0.48
RIF1-208ENST00000457745 ANP32CO43423 234 aa12.05□□□□□ -0.48
RIF1-208ENST00000457745 AMER1Q5JTC6 1135 aaPredicted RBP12.05□□□□□ -0.48
RIF1-208ENST00000457745 PIK3R4Q99570 1358 aa12.05□□□□□ -0.48
RIF1-208ENST00000457745 NSD3Q9BZ95 1437 aa12.04□□□□□ -0.48
RIF1-208ENST00000457745 FMN2Q9NZ56 1722 aa12.04□□□□□ -0.48
RIF1-208ENST00000457745 XIRP1Q702N8 1843 aaKnown RBP12.04□□□□□ -0.48
RIF1-208ENST00000457745 A0A1W2PP64 1363 aa12.04□□□□□ -0.48
RIF1-208ENST00000457745 PARD3Q8TEW0 1356 aa12.04□□□□□ -0.48
RIF1-208ENST00000457745 AKAP12Q02952 1782 aa12.03□□□□□ -0.48
RIF1-208ENST00000457745 WASLO00401 505 aaPredicted RBP12.03□□□□□ -0.48
RIF1-208ENST00000457745 SRPK2P78362 688 aaKnown RBP12.03□□□□□ -0.48
RIF1-208ENST00000457745 CC2D1BQ5T0F9 858 aaKnown RBP12.03□□□□□ -0.48
RIF1-208ENST00000457745 NUTM2FA1L443 756 aa12.02□□□□□ -0.49
RIF1-208ENST00000457745 TMC1Q8TDI8 760 aa12.02□□□□□ -0.49
RIF1-208ENST00000457745 MON2Q7Z3U7 1717 aa12.02□□□□□ -0.49
RIF1-208ENST00000457745 CDC42BPGQ6DT37 1551 aa12.01□□□□□ -0.49
RIF1-208ENST00000457745 MKRN4PQ13434 485 aaPredicted RBP12.01□□□□□ -0.49
RIF1-208ENST00000457745 SP7Q8TDD2 431 aaPredicted RBP12.01□□□□□ -0.49
RIF1-208ENST00000457745 YTHDC1Q96MU7 727 aaKnown RBP12.01□□□□□ -0.49
RIF1-208ENST00000457745 ANKRD36BQ8N2N9 1353 aa12.01□□□□□ -0.49
RIF1-208ENST00000457745 NRKQ7Z2Y5 1582 aa12.01□□□□□ -0.49
RIF1-208ENST00000457745 CDCA8Q53HL2 280 aa12□□□□□ -0.49
RIF1-208ENST00000457745 PUS7Q96PZ0 661 aaKnown RBP12□□□□□ -0.49
RIF1-208ENST00000457745 CABP1Q9NZU7 370 aa12□□□□□ -0.49
RIF1-208ENST00000457745 PPIP5K1Q6PFW1 1433 aa12□□□□□ -0.49
RIF1-208ENST00000457745 CCER2I3L3R5 266 aa11.99□□□□□ -0.49
RIF1-208ENST00000457745 NUDT16Q96DE0 195 aaKnown RBP11.99□□□□□ -0.49
RIF1-208ENST00000457745 ATAD2Q6PL18 1390 aa11.99□□□□□ -0.49
RIF1-208ENST00000457745 ITSN1Q15811 1721 aa11.99□□□□□ -0.49
RIF1-208ENST00000457745 KIF20BQ96Q89 1820 aa11.98□□□□□ -0.49
RIF1-208ENST00000457745 CPSF1Q10570 1443 aaKnown RBP11.98□□□□□ -0.49
RIF1-208ENST00000457745 ADGRL3Q9HAR2 1447 aa11.98□□□□□ -0.49
RIF1-208ENST00000457745 KTN1Q86UP2 1357 aaKnown RBP11.98□□□□□ -0.49
RIF1-208ENST00000457745 ANKRD26Q9UPS8 1709 aa11.97□□□□□ -0.49
RIF1-208ENST00000457745 ZRANB1Q9UGI0 708 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms