RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-208ENST00000456953 NPHP3Q7Z494 1330 aa20.14■□□□□ 0.81
SNHG17-208ENST00000456953 HFM1A2PYH4 1435 aa20.13■□□□□ 0.81
SNHG17-208ENST00000456953 VGFO15240 615 aaPredicted RBP20.13■□□□□ 0.81
SNHG17-208ENST00000456953 KIF1BO60333 1816 aa20.13■□□□□ 0.81
SNHG17-208ENST00000456953 GJD4Q96KN9 370 aaPredicted RBP20.12■□□□□ 0.81
SNHG17-208ENST00000456953 MARF1Q9Y4F3 1742 aaKnown RBP20.12■□□□□ 0.81
SNHG17-208ENST00000456953 ITGAEP38570 1179 aa20.11■□□□□ 0.81
SNHG17-208ENST00000456953 PXDNQ92626 1479 aa20.11■□□□□ 0.81
SNHG17-208ENST00000456953 CDC42BPGQ6DT37 1551 aa20.09■□□□□ 0.81
SNHG17-208ENST00000456953 ESCO1Q5FWF5 840 aa20.09■□□□□ 0.81
SNHG17-208ENST00000456953 BLMP54132 1417 aaPredicted RBP20.09■□□□□ 0.81
SNHG17-208ENST00000456953 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.07■□□□□ 0.8
SNHG17-208ENST00000456953 LRPPRCP42704 1394 aaKnown RBP20.06■□□□□ 0.8
SNHG17-208ENST00000456953 RPGRIP1LQ68CZ1 1315 aa20.05■□□□□ 0.8
SNHG17-208ENST00000456953 FOXO3O43524 673 aa20.05■□□□□ 0.8
SNHG17-208ENST00000456953 RALGAPBQ86X10 1494 aa20.05■□□□□ 0.8
SNHG17-208ENST00000456953 UNC5CLQ8IV45 518 aa20.04■□□□□ 0.8
SNHG17-208ENST00000456953 GLI3P10071 1580 aa20.04■□□□□ 0.8
SNHG17-208ENST00000456953 SLIT2O94813 1529 aa20.03■□□□□ 0.8
SNHG17-208ENST00000456953 XPCQ01831 940 aaPredicted RBP20.03■□□□□ 0.8
SNHG17-208ENST00000456953 NAIPQ13075 1403 aa20.01■□□□□ 0.79
SNHG17-208ENST00000456953 SF3B2Q13435 895 aaKnown RBP20■□□□□ 0.79
SNHG17-208ENST00000456953 LRP5O75197 1615 aa20■□□□□ 0.79
SNHG17-208ENST00000456953 PPLO60437 1756 aa20■□□□□ 0.79
SNHG17-208ENST00000456953 DEFB132Q7Z7B7 95 aa19.99■□□□□ 0.79
SNHG17-208ENST00000456953 BRWD3Q6RI45 1802 aa19.98■□□□□ 0.79
SNHG17-208ENST00000456953 SPATA31A3Q5VYP0 1347 aa19.98■□□□□ 0.79
SNHG17-208ENST00000456953 USP32Q8NFA0 1604 aa19.97■□□□□ 0.79
SNHG17-208ENST00000456953 CCDC144AA2RUR9 1427 aa19.96■□□□□ 0.79
SNHG17-208ENST00000456953 TECPR2O15040 1411 aa19.96■□□□□ 0.79
SNHG17-208ENST00000456953 SEPT12Q8IYM1 358 aa19.96■□□□□ 0.79
SNHG17-208ENST00000456953 KIF1AQ12756 1690 aa19.94■□□□□ 0.78
SNHG17-208ENST00000456953 NUTM2FA1L443 756 aa19.94■□□□□ 0.78
SNHG17-208ENST00000456953 VPS72Q15906 364 aa19.93■□□□□ 0.78
SNHG17-208ENST00000456953 ONECUT3O60422 494 aaPredicted RBP19.92■□□□□ 0.78
SNHG17-208ENST00000456953 WAPLQ7Z5K2 1190 aa19.92■□□□□ 0.78
SNHG17-208ENST00000456953 STK26Q9P289 416 aa19.91■□□□□ 0.78
SNHG17-208ENST00000456953 FMN2Q9NZ56 1722 aa19.9■□□□□ 0.78
SNHG17-208ENST00000456953 NWD2Q9ULI1 1742 aa19.9■□□□□ 0.78
SNHG17-208ENST00000456953 HAP1P54257 671 aaPredicted RBP19.9■□□□□ 0.78
SNHG17-208ENST00000456953 KRT28Q7Z3Y7 464 aa19.9■□□□□ 0.78
SNHG17-208ENST00000456953 KRT27Q7Z3Y8 459 aa19.9■□□□□ 0.78
SNHG17-208ENST00000456953 ABCC11Q96J66 1382 aa19.9■□□□□ 0.78
SNHG17-208ENST00000456953 TNS3Q68CZ2 1445 aa19.89■□□□□ 0.77
SNHG17-208ENST00000456953 ADGRF5Q8IZF2 1346 aa19.89■□□□□ 0.77
SNHG17-208ENST00000456953 RRBP1Q9P2E9 1410 aaKnown RBP19.89■□□□□ 0.77
SNHG17-208ENST00000456953 KNDC1Q76NI1 1749 aa19.88■□□□□ 0.77
SNHG17-208ENST00000456953 PLCH1Q4KWH8 1693 aa19.88■□□□□ 0.77
SNHG17-208ENST00000456953 SLC4A1APQ9BWU0 796 aaKnown RBP19.88■□□□□ 0.77
SNHG17-208ENST00000456953 CCDC9Q9Y3X0 531 aaKnown RBP19.88■□□□□ 0.77
SNHG17-208ENST00000456953 PLEKHH1Q9ULM0 1364 aa19.87■□□□□ 0.77
SNHG17-208ENST00000456953 HRCP23327 699 aa19.86■□□□□ 0.77
SNHG17-208ENST00000456953 BAG6P46379 1132 aa19.86■□□□□ 0.77
SNHG17-208ENST00000456953 PSME1Q06323 249 aa19.86■□□□□ 0.77
SNHG17-208ENST00000456953 ANKRD30BQ9BXX2 1392 aa19.85■□□□□ 0.77
SNHG17-208ENST00000456953 PSDA5PKW4 1024 aaPredicted RBP19.85■□□□□ 0.77
SNHG17-208ENST00000456953 CABLES1Q8TDN4 633 aa19.85■□□□□ 0.77
SNHG17-208ENST00000456953 PPARGC1BQ86YN6 1023 aaKnown RBP19.84■□□□□ 0.77
SNHG17-208ENST00000456953 PHF8Q9UPP1 1060 aa19.84■□□□□ 0.77
SNHG17-208ENST00000456953 SBNO1A3KN83 1393 aa19.83■□□□□ 0.77
SNHG17-208ENST00000456953 ARHGEF10O15013 1369 aa19.83■□□□□ 0.77
SNHG17-208ENST00000456953 TMEM132EQ6IEE7 984 aa19.83■□□□□ 0.77
SNHG17-208ENST00000456953 ABCA3Q99758 1704 aa19.82■□□□□ 0.76
SNHG17-208ENST00000456953 YTHDC2Q9H6S0 1430 aaKnown RBP19.82■□□□□ 0.76
SNHG17-208ENST00000456953 A0A0G2JS52 829 aa19.81■□□□□ 0.76
SNHG17-208ENST00000456953 MYT1Q01538 1121 aa19.81■□□□□ 0.76
SNHG17-208ENST00000456953 SIRT1Q96EB6 747 aa19.81■□□□□ 0.76
SNHG17-208ENST00000456953 PIK3C2GO75747 1445 aa19.81■□□□□ 0.76
SNHG17-208ENST00000456953 SPATA31E1Q6ZUB1 1445 aa19.81■□□□□ 0.76
SNHG17-208ENST00000456953 IFT172Q9UG01 1749 aa19.81■□□□□ 0.76
SNHG17-208ENST00000456953 NRXN1Q9ULB1 1477 aa19.8■□□□□ 0.76
SNHG17-208ENST00000456953 FAM83GA6ND36 823 aa19.8■□□□□ 0.76
SNHG17-208ENST00000456953 RGL3Q3MIN7 710 aa19.8■□□□□ 0.76
SNHG17-208ENST00000456953 PLEKHG5O94827 1062 aa19.79■□□□□ 0.76
SNHG17-208ENST00000456953 LMOD2Q6P5Q4 547 aa19.79■□□□□ 0.76
SNHG17-208ENST00000456953 RGPD8O14715 1765 aaPredicted RBP19.79■□□□□ 0.76
SNHG17-208ENST00000456953 FAM98CQ17RN3 349 aaKnown RBP19.78■□□□□ 0.76
SNHG17-208ENST00000456953 RGPD1P0DJD0 1748 aa19.77■□□□□ 0.76
SNHG17-208ENST00000456953 NRAPQ86VF7 1730 aa19.77■□□□□ 0.76
SNHG17-208ENST00000456953 EN1Q05925 392 aaPredicted RBP19.76■□□□□ 0.75
SNHG17-208ENST00000456953 DISP2A7MBM2 1401 aa19.75■□□□□ 0.75
SNHG17-208ENST00000456953 R3HDM1Q15032 1099 aaKnown RBP19.74■□□□□ 0.75
SNHG17-208ENST00000456953 BTG4Q9NY30 223 aa19.74■□□□□ 0.75
SNHG17-208ENST00000456953 COL14A1Q05707 1796 aaKnown RBP19.72■□□□□ 0.75
SNHG17-208ENST00000456953 ANKARQ7Z5J8 1434 aa19.72■□□□□ 0.75
SNHG17-208ENST00000456953 C14orf93Q9H972 538 aaKnown RBP19.71■□□□□ 0.75
SNHG17-208ENST00000456953 DHX57Q6P158 1386 aaKnown RBP19.7■□□□□ 0.74
SNHG17-208ENST00000456953 TNS1Q9HBL0 1735 aaKnown RBP19.7■□□□□ 0.74
SNHG17-208ENST00000456953 SPATA31A5Q5VU36 1347 aa19.7■□□□□ 0.74
SNHG17-208ENST00000456953 SPATA31A7Q8IWB4 1347 aa19.7■□□□□ 0.74
SNHG17-208ENST00000456953 TRPM3Q9HCF6 1732 aaPredicted RBP19.69■□□□□ 0.74
SNHG17-208ENST00000456953 FAM182BQ5T319 152 aa19.69■□□□□ 0.74
SNHG17-208ENST00000456953 PMFBP1Q8TBY8 1022 aa19.69■□□□□ 0.74
SNHG17-208ENST00000456953 PRAM1Q96QH2 718 aa19.69■□□□□ 0.74
SNHG17-208ENST00000456953 THSD7AQ9UPZ6 1657 aa19.68■□□□□ 0.74
SNHG17-208ENST00000456953 ADGRB2O60241 1585 aa19.67■□□□□ 0.74
SNHG17-208ENST00000456953 SAFB2Q14151 953 aaKnown RBP eCLIP19.67■□□□□ 0.74
SNHG17-208ENST00000456953 ALS2Q96Q42 1657 aa19.67■□□□□ 0.74
SNHG17-208ENST00000456953 GPRASP1Q5JY77 1395 aa19.67■□□□□ 0.74
SNHG17-208ENST00000456953 EZH2Q15910 746 aaKnown RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms