RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 PLEKHH1Q9ULM0 1364 aa19.18■□□□□ 0.66
TREX1-203ENST00000456089 PIK3C2GO75747 1445 aa19.17■□□□□ 0.66
TREX1-203ENST00000456089 RGPD8O14715 1765 aaPredicted RBP19.17■□□□□ 0.66
TREX1-203ENST00000456089 NUTM2FA1L443 756 aa19.17■□□□□ 0.66
TREX1-203ENST00000456089 C8orf37Q96NL8 207 aa19.17■□□□□ 0.66
TREX1-203ENST00000456089 RAB3GAP2Q9H2M9 1393 aa19.17■□□□□ 0.66
TREX1-203ENST00000456089 ADAMTS2O95450 1211 aa19.15■□□□□ 0.66
TREX1-203ENST00000456089 LRPPRCP42704 1394 aaKnown RBP19.15■□□□□ 0.66
TREX1-203ENST00000456089 FMN2Q9NZ56 1722 aa19.14■□□□□ 0.66
TREX1-203ENST00000456089 ESCO1Q5FWF5 840 aa19.14■□□□□ 0.65
TREX1-203ENST00000456089 TECPR2O15040 1411 aa19.14■□□□□ 0.65
TREX1-203ENST00000456089 XPCQ01831 940 aaPredicted RBP19.13■□□□□ 0.65
TREX1-203ENST00000456089 SOS2Q07890 1332 aaPredicted RBP19.13■□□□□ 0.65
TREX1-203ENST00000456089 ACIN1Q9UKV3 1341 aaKnown RBP19.13■□□□□ 0.65
TREX1-203ENST00000456089 YTHDC2Q9H6S0 1430 aaKnown RBP19.12■□□□□ 0.65
TREX1-203ENST00000456089 RXRBP28702 533 aa19.12■□□□□ 0.65
TREX1-203ENST00000456089 COL22A1Q8NFW1 1626 aaPredicted RBP19.11■□□□□ 0.65
TREX1-203ENST00000456089 PXDNQ92626 1479 aa19.1■□□□□ 0.65
TREX1-203ENST00000456089 ABCC11Q96J66 1382 aa19.1■□□□□ 0.65
TREX1-203ENST00000456089 CFAP70Q5T0N1 1121 aa19.1■□□□□ 0.65
TREX1-203ENST00000456089 MARF1Q9Y4F3 1742 aaKnown RBP19.1■□□□□ 0.65
TREX1-203ENST00000456089 NRXN1Q9ULB1 1477 aa19.09■□□□□ 0.65
TREX1-203ENST00000456089 FOXO3O43524 673 aa19.08■□□□□ 0.64
TREX1-203ENST00000456089 NGLY1Q96IV0 654 aa19.08■□□□□ 0.64
TREX1-203ENST00000456089 QTRT2Q9H974 415 aaKnown RBP19.08■□□□□ 0.64
TREX1-203ENST00000456089 MYOM2P54296 1465 aa19.08■□□□□ 0.64
TREX1-203ENST00000456089 C14orf93Q9H972 538 aaKnown RBP19.07■□□□□ 0.64
TREX1-203ENST00000456089 NPHP3Q7Z494 1330 aa19.06■□□□□ 0.64
TREX1-203ENST00000456089 SAFB2Q14151 953 aaKnown RBP eCLIP19.06■□□□□ 0.64
TREX1-203ENST00000456089 RGS12O14924 1447 aa19.06■□□□□ 0.64
TREX1-203ENST00000456089 UPF1Q92900 1129 aaKnown RBP eCLIP19.05■□□□□ 0.64
TREX1-203ENST00000456089 KIF1AQ12756 1690 aa19.05■□□□□ 0.64
TREX1-203ENST00000456089 CDK12Q9NYV4 1490 aaPredicted RBP19.04■□□□□ 0.64
TREX1-203ENST00000456089 KDM2AQ9Y2K7 1162 aa19.02■□□□□ 0.64
TREX1-203ENST00000456089 DHX57Q6P158 1386 aaKnown RBP19.02■□□□□ 0.64
TREX1-203ENST00000456089 RBM6P78332 1123 aaKnown RBP19.01■□□□□ 0.63
TREX1-203ENST00000456089 PRAM1Q96QH2 718 aa19.01■□□□□ 0.63
TREX1-203ENST00000456089 USP21Q9UK80 565 aa19.01■□□□□ 0.63
TREX1-203ENST00000456089 USP32Q8NFA0 1604 aa19■□□□□ 0.63
TREX1-203ENST00000456089 ADGRB1O14514 1584 aa18.99■□□□□ 0.63
TREX1-203ENST00000456089 PLEKHG5O94827 1062 aa18.99■□□□□ 0.63
TREX1-203ENST00000456089 DCAF11Q8TEB1 546 aa18.97■□□□□ 0.63
TREX1-203ENST00000456089 SIRT1Q96EB6 747 aa18.97■□□□□ 0.63
TREX1-203ENST00000456089 DLC1Q96QB1 1528 aa18.96■□□□□ 0.63
TREX1-203ENST00000456089 KRT28Q7Z3Y7 464 aa18.96■□□□□ 0.63
TREX1-203ENST00000456089 FNBP4Q8N3X1 1017 aaPredicted RBP18.96■□□□□ 0.63
TREX1-203ENST00000456089 POGKQ9P215 609 aa18.96■□□□□ 0.63
TREX1-203ENST00000456089 TRAK1Q9UPV9 953 aa18.96■□□□□ 0.63
TREX1-203ENST00000456089 ABCA3Q99758 1704 aa18.96■□□□□ 0.63
TREX1-203ENST00000456089 SPATA31A3Q5VYP0 1347 aa18.96■□□□□ 0.63
TREX1-203ENST00000456089 ATRNO75882 1429 aa18.95■□□□□ 0.62
TREX1-203ENST00000456089 HIRIP3Q9BW71 556 aaPredicted RBP18.95■□□□□ 0.62
TREX1-203ENST00000456089 PHF8Q9UPP1 1060 aa18.95■□□□□ 0.62
TREX1-203ENST00000456089 BCL9LQ86UU0 1499 aa18.95■□□□□ 0.62
TREX1-203ENST00000456089 TRPC5Q9UL62 973 aaPredicted RBP18.94■□□□□ 0.62
TREX1-203ENST00000456089 ARHGEF28Q8N1W1 1705 aaKnown RBP18.94■□□□□ 0.62
TREX1-203ENST00000456089 ADGRB2O60241 1585 aa18.93■□□□□ 0.62
TREX1-203ENST00000456089 PMFBP1Q8TBY8 1022 aa18.93■□□□□ 0.62
TREX1-203ENST00000456089 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.93■□□□□ 0.62
TREX1-203ENST00000456089 MINK1Q8N4C8 1332 aaPredicted RBP18.93■□□□□ 0.62
TREX1-203ENST00000456089 CABLES1Q8TDN4 633 aa18.92■□□□□ 0.62
TREX1-203ENST00000456089 PLCH1Q4KWH8 1693 aa18.92■□□□□ 0.62
TREX1-203ENST00000456089 TNS3Q68CZ2 1445 aa18.91■□□□□ 0.62
TREX1-203ENST00000456089 LMOD2Q6P5Q4 547 aa18.91■□□□□ 0.62
TREX1-203ENST00000456089 TRPM3Q9HCF6 1732 aaPredicted RBP18.91■□□□□ 0.62
TREX1-203ENST00000456089 HRCP23327 699 aa18.9■□□□□ 0.62
TREX1-203ENST00000456089 BRWD3Q6RI45 1802 aa18.89■□□□□ 0.61
TREX1-203ENST00000456089 PSME1Q06323 249 aa18.88■□□□□ 0.61
TREX1-203ENST00000456089 GLI3P10071 1580 aa18.88■□□□□ 0.61
TREX1-203ENST00000456089 SLIT2O94813 1529 aa18.87■□□□□ 0.61
TREX1-203ENST00000456089 HAP1P54257 671 aaPredicted RBP18.87■□□□□ 0.61
TREX1-203ENST00000456089 PRR36Q9H6K5 1346 aa18.87■□□□□ 0.61
TREX1-203ENST00000456089 ALS2Q96Q42 1657 aa18.86■□□□□ 0.61
TREX1-203ENST00000456089 ANKARQ7Z5J8 1434 aa18.86■□□□□ 0.61
TREX1-203ENST00000456089 TULP4Q9NRJ4 1543 aa18.85■□□□□ 0.61
TREX1-203ENST00000456089 EP400Q96L91 3159 aa18.85■□□□□ 0.61
TREX1-203ENST00000456089 RALGAPBQ86X10 1494 aa18.84■□□□□ 0.61
TREX1-203ENST00000456089 SBNO1A3KN83 1393 aa18.84■□□□□ 0.61
TREX1-203ENST00000456089 ATAD2Q6PL18 1390 aa18.84■□□□□ 0.61
TREX1-203ENST00000456089 ITSN1Q15811 1721 aa18.84■□□□□ 0.61
TREX1-203ENST00000456089 NWD2Q9ULI1 1742 aa18.84■□□□□ 0.61
TREX1-203ENST00000456089 UNC5CLQ8IV45 518 aa18.84■□□□□ 0.61
TREX1-203ENST00000456089 GJD4Q96KN9 370 aaPredicted RBP18.84■□□□□ 0.61
TREX1-203ENST00000456089 WASLO00401 505 aaPredicted RBP18.82■□□□□ 0.6
TREX1-203ENST00000456089 CRYBG1Q9Y4K1 1723 aa18.82■□□□□ 0.6
TREX1-203ENST00000456089 KIAA1210Q9ULL0 1709 aa18.81■□□□□ 0.6
TREX1-203ENST00000456089 ARHGEF10O15013 1369 aa18.81■□□□□ 0.6
TREX1-203ENST00000456089 NRAPQ86VF7 1730 aa18.8■□□□□ 0.6
TREX1-203ENST00000456089 ATP7BP35670 1465 aa18.78■□□□□ 0.6
TREX1-203ENST00000456089 EIF3AQ14152 1382 aaKnown RBP18.78■□□□□ 0.6
TREX1-203ENST00000456089 GPRASP1Q5JY77 1395 aa18.78■□□□□ 0.6
TREX1-203ENST00000456089 TOPAZ1Q8N9V7 1692 aa18.77■□□□□ 0.6
TREX1-203ENST00000456089 FAM83GA6ND36 823 aa18.77■□□□□ 0.6
TREX1-203ENST00000456089 NBPF1Q3BBV0 1214 aa18.77■□□□□ 0.6
TREX1-203ENST00000456089 NGDNQ8NEJ9 315 aaKnown RBP18.77■□□□□ 0.6
TREX1-203ENST00000456089 STAC3Q96MF2 364 aa18.77■□□□□ 0.6
TREX1-203ENST00000456089 CCDC9Q9Y3X0 531 aaKnown RBP18.77■□□□□ 0.6
TREX1-203ENST00000456089 PAK3O75914 559 aaPredicted RBP18.76■□□□□ 0.59
TREX1-203ENST00000456089 COL14A1Q05707 1796 aaKnown RBP18.76■□□□□ 0.59
TREX1-203ENST00000456089 NUDT16Q96DE0 195 aaKnown RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms