RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 PPARGC1BQ86YN6 1023 aaKnown RBP35.31■■■■□ 3.24
PTPRA-208ENST00000455631 ZRANB1Q9UGI0 708 aa35.31■■■■□ 3.24
PTPRA-208ENST00000455631 MARF1Q9Y4F3 1742 aaKnown RBP35.29■■■■□ 3.24
PTPRA-208ENST00000455631 CDC42BPGQ6DT37 1551 aa35.28■■■■□ 3.24
PTPRA-208ENST00000455631 NPHP3Q7Z494 1330 aa35.28■■■■□ 3.24
PTPRA-208ENST00000455631 PPLO60437 1756 aa35.27■■■■□ 3.24
PTPRA-208ENST00000455631 ESCO1Q5FWF5 840 aa35.26■■■■□ 3.24
PTPRA-208ENST00000455631 PXDNQ92626 1479 aa35.25■■■■□ 3.23
PTPRA-208ENST00000455631 BCL9LQ86UU0 1499 aa35.24■■■■□ 3.23
PTPRA-208ENST00000455631 EP400Q96L91 3159 aa35.23■■■■□ 3.23
PTPRA-208ENST00000455631 RPGRIP1LQ68CZ1 1315 aa35.23■■■■□ 3.23
PTPRA-208ENST00000455631 NAIPQ13075 1403 aa35.23■■■■□ 3.23
PTPRA-208ENST00000455631 XPCQ01831 940 aaPredicted RBP35.21■■■■□ 3.23
PTPRA-208ENST00000455631 CCDC125Q86Z20 511 aa35.19■■■■□ 3.22
PTPRA-208ENST00000455631 FOXO3O43524 673 aa35.17■■■■□ 3.22
PTPRA-208ENST00000455631 GJD4Q96KN9 370 aaPredicted RBP35.17■■■■□ 3.22
PTPRA-208ENST00000455631 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.16■■■■□ 3.22
PTPRA-208ENST00000455631 LRPPRCP42704 1394 aaKnown RBP35.13■■■■□ 3.21
PTPRA-208ENST00000455631 NUTM2FA1L443 756 aa35.11■■■■□ 3.21
PTPRA-208ENST00000455631 SLC4A1APQ9BWU0 796 aaKnown RBP35.09■■■■□ 3.21
PTPRA-208ENST00000455631 GLI3P10071 1580 aa35.08■■■■□ 3.21
PTPRA-208ENST00000455631 RRBP1Q9P2E9 1410 aaKnown RBP35.08■■■■□ 3.21
PTPRA-208ENST00000455631 STK26Q9P289 416 aa35.07■■■■□ 3.2
PTPRA-208ENST00000455631 RALGAPBQ86X10 1494 aa35.07■■■■□ 3.2
PTPRA-208ENST00000455631 UNC5CLQ8IV45 518 aa35.05■■■■□ 3.2
PTPRA-208ENST00000455631 SLIT2O94813 1529 aa35.05■■■■□ 3.2
PTPRA-208ENST00000455631 TECPR2O15040 1411 aa35.05■■■■□ 3.2
PTPRA-208ENST00000455631 BLMP54132 1417 aaPredicted RBP35.05■■■■□ 3.2
PTPRA-208ENST00000455631 WAPLQ7Z5K2 1190 aa35.04■■■■□ 3.2
PTPRA-208ENST00000455631 KIF1AQ12756 1690 aa35.04■■■■□ 3.2
PTPRA-208ENST00000455631 FMN2Q9NZ56 1722 aa35.03■■■■□ 3.2
PTPRA-208ENST00000455631 ADGRF5Q8IZF2 1346 aa35.03■■■■□ 3.2
PTPRA-208ENST00000455631 USP32Q8NFA0 1604 aa35.03■■■■□ 3.2
PTPRA-208ENST00000455631 KNDC1Q76NI1 1749 aa35.02■■■■□ 3.2
PTPRA-208ENST00000455631 BRWD3Q6RI45 1802 aa35.02■■■■□ 3.2
PTPRA-208ENST00000455631 SPATA31A3Q5VYP0 1347 aa35■■■■□ 3.19
PTPRA-208ENST00000455631 CCDC144AA2RUR9 1427 aa34.99■■■■□ 3.19
PTPRA-208ENST00000455631 PLEKHH1Q9ULM0 1364 aa34.99■■■■□ 3.19
PTPRA-208ENST00000455631 IFT172Q9UG01 1749 aa34.97■■■■□ 3.19
PTPRA-208ENST00000455631 HAP1P54257 671 aaPredicted RBP34.94■■■■□ 3.18
PTPRA-208ENST00000455631 RGL3Q3MIN7 710 aa34.94■■■■□ 3.18
PTPRA-208ENST00000455631 DEFB132Q7Z7B7 95 aa34.94■■■■□ 3.18
PTPRA-208ENST00000455631 ABCC11Q96J66 1382 aa34.94■■■■□ 3.18
PTPRA-208ENST00000455631 SF3B2Q13435 895 aaKnown RBP34.93■■■■□ 3.18
PTPRA-208ENST00000455631 TMEM132EQ6IEE7 984 aa34.93■■■■□ 3.18
PTPRA-208ENST00000455631 KRT28Q7Z3Y7 464 aa34.92■■■■□ 3.18
PTPRA-208ENST00000455631 PLCH1Q4KWH8 1693 aa34.92■■■■□ 3.18
PTPRA-208ENST00000455631 ANKRD30BQ9BXX2 1392 aa34.91■■■■□ 3.18
PTPRA-208ENST00000455631 SEPT12Q8IYM1 358 aa34.9■■■■□ 3.18
PTPRA-208ENST00000455631 TNS3Q68CZ2 1445 aa34.89■■■■□ 3.18
PTPRA-208ENST00000455631 SPATA31E1Q6ZUB1 1445 aa34.89■■■■□ 3.18
PTPRA-208ENST00000455631 RGPD8O14715 1765 aaPredicted RBP34.89■■■■□ 3.18
PTPRA-208ENST00000455631 PLEKHG5O94827 1062 aa34.88■■■■□ 3.17
PTPRA-208ENST00000455631 PIK3C2GO75747 1445 aa34.88■■■■□ 3.17
PTPRA-208ENST00000455631 NWD2Q9ULI1 1742 aa34.87■■■■□ 3.17
PTPRA-208ENST00000455631 YTHDC2Q9H6S0 1430 aaKnown RBP34.87■■■■□ 3.17
PTPRA-208ENST00000455631 CCDC9Q9Y3X0 531 aaKnown RBP34.86■■■■□ 3.17
PTPRA-208ENST00000455631 ABCA3Q99758 1704 aa34.86■■■■□ 3.17
PTPRA-208ENST00000455631 VPS72Q15906 364 aa34.85■■■■□ 3.17
PTPRA-208ENST00000455631 CABLES1Q8TDN4 633 aa34.85■■■■□ 3.17
PTPRA-208ENST00000455631 LRP5O75197 1615 aa34.84■■■■□ 3.17
PTPRA-208ENST00000455631 PSME1Q06323 249 aa34.82■■■■□ 3.16
PTPRA-208ENST00000455631 PHF8Q9UPP1 1060 aa34.82■■■■□ 3.16
PTPRA-208ENST00000455631 KRT27Q7Z3Y8 459 aa34.8■■■■□ 3.16
PTPRA-208ENST00000455631 LMOD2Q6P5Q4 547 aa34.79■■■■□ 3.16
PTPRA-208ENST00000455631 NRXN1Q9ULB1 1477 aa34.77■■■■□ 3.16
PTPRA-208ENST00000455631 SBNO1A3KN83 1393 aa34.76■■■■□ 3.16
PTPRA-208ENST00000455631 A0A0G2JS52 829 aa34.76■■■■□ 3.16
PTPRA-208ENST00000455631 MYT1Q01538 1121 aa34.76■■■■□ 3.16
PTPRA-208ENST00000455631 ARHGEF10O15013 1369 aa34.75■■■■□ 3.15
PTPRA-208ENST00000455631 ONECUT3O60422 494 aaPredicted RBP34.75■■■■□ 3.15
PTPRA-208ENST00000455631 SIRT1Q96EB6 747 aa34.73■■■■□ 3.15
PTPRA-208ENST00000455631 NRAPQ86VF7 1730 aa34.71■■■■□ 3.15
PTPRA-208ENST00000455631 PSDA5PKW4 1024 aaPredicted RBP34.69■■■■□ 3.14
PTPRA-208ENST00000455631 BAG6P46379 1132 aa34.69■■■■□ 3.14
PTPRA-208ENST00000455631 SAFB2Q14151 953 aaKnown RBP eCLIP34.69■■■■□ 3.14
PTPRA-208ENST00000455631 MPHOSPH9Q99550 1183 aa34.69■■■■□ 3.14
PTPRA-208ENST00000455631 FAM83GA6ND36 823 aa34.68■■■■□ 3.14
PTPRA-208ENST00000455631 DHX57Q6P158 1386 aaKnown RBP34.67■■■■□ 3.14
PTPRA-208ENST00000455631 C14orf93Q9H972 538 aaKnown RBP34.67■■■■□ 3.14
PTPRA-208ENST00000455631 PRAM1Q96QH2 718 aa34.66■■■■□ 3.14
PTPRA-208ENST00000455631 FAM98CQ17RN3 349 aaKnown RBP34.65■■■■□ 3.14
PTPRA-208ENST00000455631 PMFBP1Q8TBY8 1022 aa34.64■■■■□ 3.14
PTPRA-208ENST00000455631 CFAP70Q5T0N1 1121 aa34.63■■■■□ 3.13
PTPRA-208ENST00000455631 TRPM3Q9HCF6 1732 aaPredicted RBP34.62■■■■□ 3.13
PTPRA-208ENST00000455631 ANKARQ7Z5J8 1434 aa34.62■■■■□ 3.13
PTPRA-208ENST00000455631 RGPD1P0DJD0 1748 aa34.61■■■■□ 3.13
PTPRA-208ENST00000455631 BTG4Q9NY30 223 aa34.61■■■■□ 3.13
PTPRA-208ENST00000455631 COL14A1Q05707 1796 aaKnown RBP34.6■■■■□ 3.13
PTPRA-208ENST00000455631 HRCP23327 699 aa34.6■■■■□ 3.13
PTPRA-208ENST00000455631 ADGRB2O60241 1585 aa34.58■■■■□ 3.13
PTPRA-208ENST00000455631 POGKQ9P215 609 aa34.58■■■■□ 3.13
PTPRA-208ENST00000455631 ALS2Q96Q42 1657 aa34.57■■■■□ 3.13
PTPRA-208ENST00000455631 DLC1Q96QB1 1528 aa34.57■■■■□ 3.12
PTPRA-208ENST00000455631 EN1Q05925 392 aaPredicted RBP34.55■■■■□ 3.12
PTPRA-208ENST00000455631 FAM182BQ5T319 152 aa34.53■■■■□ 3.12
PTPRA-208ENST00000455631 GPRASP1Q5JY77 1395 aa34.52■■■■□ 3.12
PTPRA-208ENST00000455631 TNS1Q9HBL0 1735 aaKnown RBP34.5■■■■□ 3.11
PTPRA-208ENST00000455631 THSD7AQ9UPZ6 1657 aa34.5■■■■□ 3.11
PTPRA-208ENST00000455631 HIRIP3Q9BW71 556 aaPredicted RBP34.49■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms