RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 USP21Q9UK80 565 aa28.12■■■□□ 2.09
MSH6-206ENST00000455383 ADGRF5Q8IZF2 1346 aa28.12■■■□□ 2.09
MSH6-206ENST00000455383 TECPR2O15040 1411 aa28.11■■■□□ 2.09
MSH6-206ENST00000455383 MYOM2P54296 1465 aa28.11■■■□□ 2.09
MSH6-206ENST00000455383 NPHP3Q7Z494 1330 aa28.11■■■□□ 2.09
MSH6-206ENST00000455383 PXDNQ92626 1479 aa28.1■■■□□ 2.09
MSH6-206ENST00000455383 TRPC5Q9UL62 973 aaPredicted RBP28.1■■■□□ 2.09
MSH6-206ENST00000455383 SPATA31E1Q6ZUB1 1445 aa28.09■■■□□ 2.09
MSH6-206ENST00000455383 FOXD1Q16676 465 aa28.09■■■□□ 2.09
MSH6-206ENST00000455383 ATRNO75882 1429 aa28.09■■■□□ 2.09
MSH6-206ENST00000455383 ESCO1Q5FWF5 840 aa28.08■■■□□ 2.09
MSH6-206ENST00000455383 LRPPRCP42704 1394 aaKnown RBP28.06■■■□□ 2.08
MSH6-206ENST00000455383 CCDC144AA2RUR9 1427 aa28.06■■■□□ 2.08
MSH6-206ENST00000455383 ATAD2Q6PL18 1390 aa28.05■■■□□ 2.08
MSH6-206ENST00000455383 IFT172Q9UG01 1749 aa28.04■■■□□ 2.08
MSH6-206ENST00000455383 ABCC11Q96J66 1382 aa28.04■■■□□ 2.08
MSH6-206ENST00000455383 ANKRD30BQ9BXX2 1392 aa28.04■■■□□ 2.08
MSH6-206ENST00000455383 WAPLQ7Z5K2 1190 aa28.03■■■□□ 2.08
MSH6-206ENST00000455383 BCL9LQ86UU0 1499 aa28.02■■■□□ 2.08
MSH6-206ENST00000455383 FOXO3O43524 673 aa28.02■■■□□ 2.08
MSH6-206ENST00000455383 KNDC1Q76NI1 1749 aa28.01■■■□□ 2.07
MSH6-206ENST00000455383 RGL3Q3MIN7 710 aa28■■■□□ 2.07
MSH6-206ENST00000455383 STK26Q9P289 416 aa28■■■□□ 2.07
MSH6-206ENST00000455383 PIK3C2GO75747 1445 aa28■■■□□ 2.07
MSH6-206ENST00000455383 PLEKHH1Q9ULM0 1364 aa27.99■■■□□ 2.07
MSH6-206ENST00000455383 MARF1Q9Y4F3 1742 aaKnown RBP27.99■■■□□ 2.07
MSH6-206ENST00000455383 MPHOSPH9Q99550 1183 aa27.99■■■□□ 2.07
MSH6-206ENST00000455383 XPCQ01831 940 aaPredicted RBP27.98■■■□□ 2.07
MSH6-206ENST00000455383 TMEM132EQ6IEE7 984 aa27.97■■■□□ 2.07
MSH6-206ENST00000455383 SIRT1Q96EB6 747 aa27.95■■■□□ 2.06
MSH6-206ENST00000455383 FMN2Q9NZ56 1722 aa27.95■■■□□ 2.06
MSH6-206ENST00000455383 YTHDC2Q9H6S0 1430 aaKnown RBP27.94■■■□□ 2.06
MSH6-206ENST00000455383 NUTM2FA1L443 756 aa27.94■■■□□ 2.06
MSH6-206ENST00000455383 SPATA31A3Q5VYP0 1347 aa27.92■■■□□ 2.06
MSH6-206ENST00000455383 GJD4Q96KN9 370 aaPredicted RBP27.92■■■□□ 2.06
MSH6-206ENST00000455383 KIF1AQ12756 1690 aa27.91■■■□□ 2.06
MSH6-206ENST00000455383 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.9■■■□□ 2.06
MSH6-206ENST00000455383 SLIT2O94813 1529 aa27.9■■■□□ 2.06
MSH6-206ENST00000455383 C14orf93Q9H972 538 aaKnown RBP27.89■■■□□ 2.06
MSH6-206ENST00000455383 NRXN1Q9ULB1 1477 aa27.89■■■□□ 2.05
MSH6-206ENST00000455383 CCDC125Q86Z20 511 aa27.87■■■□□ 2.05
MSH6-206ENST00000455383 EP400Q96L91 3159 aa27.87■■■□□ 2.05
MSH6-206ENST00000455383 UNC5CLQ8IV45 518 aa27.86■■■□□ 2.05
MSH6-206ENST00000455383 KRT28Q7Z3Y7 464 aa27.85■■■□□ 2.05
MSH6-206ENST00000455383 GLI3P10071 1580 aa27.83■■■□□ 2.05
MSH6-206ENST00000455383 RALGAPBQ86X10 1494 aa27.83■■■□□ 2.04
MSH6-206ENST00000455383 USP32Q8NFA0 1604 aa27.82■■■□□ 2.04
MSH6-206ENST00000455383 SRCAPQ6ZRS2 3230 aa27.82■■■□□ 2.04
MSH6-206ENST00000455383 ACIN1Q9UKV3 1341 aaKnown RBP27.82■■■□□ 2.04
MSH6-206ENST00000455383 PHF8Q9UPP1 1060 aa27.81■■■□□ 2.04
MSH6-206ENST00000455383 CFAP70Q5T0N1 1121 aa27.8■■■□□ 2.04
MSH6-206ENST00000455383 DHX57Q6P158 1386 aaKnown RBP27.8■■■□□ 2.04
MSH6-206ENST00000455383 TNS3Q68CZ2 1445 aa27.8■■■□□ 2.04
MSH6-206ENST00000455383 RGPD8O14715 1765 aaPredicted RBP27.79■■■□□ 2.04
MSH6-206ENST00000455383 ZRANB1Q9UGI0 708 aa27.79■■■□□ 2.04
MSH6-206ENST00000455383 SBNO1A3KN83 1393 aa27.78■■■□□ 2.04
MSH6-206ENST00000455383 PSME1Q06323 249 aa27.77■■■□□ 2.04
MSH6-206ENST00000455383 PRAM1Q96QH2 718 aa27.75■■■□□ 2.03
MSH6-206ENST00000455383 DLC1Q96QB1 1528 aa27.75■■■□□ 2.03
MSH6-206ENST00000455383 VPS72Q15906 364 aa27.73■■■□□ 2.03
MSH6-206ENST00000455383 BLMP54132 1417 aaPredicted RBP27.73■■■□□ 2.03
MSH6-206ENST00000455383 CABLES1Q8TDN4 633 aa27.72■■■□□ 2.03
MSH6-206ENST00000455383 ANKARQ7Z5J8 1434 aa27.72■■■□□ 2.03
MSH6-206ENST00000455383 ONECUT3O60422 494 aaPredicted RBP27.71■■■□□ 2.03
MSH6-206ENST00000455383 NWD2Q9ULI1 1742 aa27.71■■■□□ 2.03
MSH6-206ENST00000455383 ARHGEF10O15013 1369 aa27.71■■■□□ 2.03
MSH6-206ENST00000455383 ABCA3Q99758 1704 aa27.7■■■□□ 2.03
MSH6-206ENST00000455383 ADGRB2O60241 1585 aa27.7■■■□□ 2.03
MSH6-206ENST00000455383 BRWD3Q6RI45 1802 aa27.7■■■□□ 2.02
MSH6-206ENST00000455383 ADGRB1O14514 1584 aa27.69■■■□□ 2.02
MSH6-206ENST00000455383 PLCH1Q4KWH8 1693 aa27.68■■■□□ 2.02
MSH6-206ENST00000455383 HAP1P54257 671 aaPredicted RBP27.68■■■□□ 2.02
MSH6-206ENST00000455383 SAFB2Q14151 953 aaKnown RBP eCLIP27.68■■■□□ 2.02
MSH6-206ENST00000455383 SEPT12Q8IYM1 358 aa27.68■■■□□ 2.02
MSH6-206ENST00000455383 POGKQ9P215 609 aa27.65■■■□□ 2.02
MSH6-206ENST00000455383 FAM83GA6ND36 823 aa27.64■■■□□ 2.02
MSH6-206ENST00000455383 PMFBP1Q8TBY8 1022 aa27.64■■■□□ 2.02
MSH6-206ENST00000455383 TRPM3Q9HCF6 1732 aaPredicted RBP27.63■■■□□ 2.01
MSH6-206ENST00000455383 LMOD2Q6P5Q4 547 aa27.62■■■□□ 2.01
MSH6-206ENST00000455383 DEFB132Q7Z7B7 95 aa27.61■■■□□ 2.01
MSH6-206ENST00000455383 RAB3GAP2Q9H2M9 1393 aa27.6■■■□□ 2.01
MSH6-206ENST00000455383 PRR36Q9H6K5 1346 aa27.6■■■□□ 2.01
MSH6-206ENST00000455383 PLEKHG5O94827 1062 aa27.59■■■□□ 2.01
MSH6-206ENST00000455383 ALS2Q96Q42 1657 aa27.59■■■□□ 2.01
MSH6-206ENST00000455383 NRAPQ86VF7 1730 aa27.58■■■□□ 2.01
MSH6-206ENST00000455383 KRT27Q7Z3Y8 459 aa27.58■■■□□ 2.01
MSH6-206ENST00000455383 TRAK1Q9UPV9 953 aa27.58■■■□□ 2.01
MSH6-206ENST00000455383 CCDC9Q9Y3X0 531 aaKnown RBP27.58■■■□□ 2.01
MSH6-206ENST00000455383 EIF3AQ14152 1382 aaKnown RBP27.58■■■□□ 2.01
MSH6-206ENST00000455383 TULP4Q9NRJ4 1543 aa27.57■■■□□ 2
MSH6-206ENST00000455383 HIRIP3Q9BW71 556 aaPredicted RBP27.56■■■□□ 2
MSH6-206ENST00000455383 SF3B2Q13435 895 aaKnown RBP27.55■■■□□ 2
MSH6-206ENST00000455383 GPRASP1Q5JY77 1395 aa27.55■■■□□ 2
MSH6-206ENST00000455383 WASLO00401 505 aaPredicted RBP27.54■■■□□ 2
MSH6-206ENST00000455383 MINK1Q8N4C8 1332 aaPredicted RBP27.54■■■□□ 2
MSH6-206ENST00000455383 STAC3Q96MF2 364 aa27.53■■■□□ 2
MSH6-206ENST00000455383 COL14A1Q05707 1796 aaKnown RBP27.53■■■□□ 2
MSH6-206ENST00000455383 BTG4Q9NY30 223 aa27.52■■■□□ 2
MSH6-206ENST00000455383 CRYBG1Q9Y4K1 1723 aa27.51■■□□□ 1.99
MSH6-206ENST00000455383 DCAF11Q8TEB1 546 aa27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms