RNA–Protein interactions for RNA: ENST00000455279.6

CCHCR1-209, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 676 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-209ENST00000455279 KDM2AQ9Y2K7 1162 aa29.9■■■□□ 2.38
CCHCR1-209ENST00000455279 SHPRHQ149N8 1683 aa29.9■■■□□ 2.38
CCHCR1-209ENST00000455279 DHX57Q6P158 1386 aaKnown RBP29.9■■■□□ 2.38
CCHCR1-209ENST00000455279 POTEAQ6S8J7 498 aa29.88■■■□□ 2.37
CCHCR1-209ENST00000455279 CDC42BPGQ6DT37 1551 aa29.87■■■□□ 2.37
CCHCR1-209ENST00000455279 NUTM2FA1L443 756 aa29.86■■■□□ 2.37
CCHCR1-209ENST00000455279 DCAF11Q8TEB1 546 aa29.85■■■□□ 2.37
CCHCR1-209ENST00000455279 ADGRB1O14514 1584 aa29.84■■■□□ 2.37
CCHCR1-209ENST00000455279 LAMC1P11047 1609 aa29.84■■■□□ 2.37
CCHCR1-209ENST00000455279 NUTM2BA6NNL0 878 aaPredicted RBP29.8■■■□□ 2.36
CCHCR1-209ENST00000455279 NUTM2EB1AL46 878 aaPredicted RBP29.8■■■□□ 2.36
CCHCR1-209ENST00000455279 SAFB2Q14151 953 aaKnown RBP eCLIP29.8■■■□□ 2.36
CCHCR1-209ENST00000455279 NUTM2AQ8IVF1 878 aaPredicted RBP29.8■■■□□ 2.36
CCHCR1-209ENST00000455279 SPATA31A6Q5VVP1 1343 aa29.79■■■□□ 2.36
CCHCR1-209ENST00000455279 PNPLA6Q8IY17 1366 aa29.78■■■□□ 2.36
CCHCR1-209ENST00000455279 FMN2Q9NZ56 1722 aa29.78■■■□□ 2.36
CCHCR1-209ENST00000455279 ESCO1Q5FWF5 840 aa29.76■■■□□ 2.35
CCHCR1-209ENST00000455279 PRAM1Q96QH2 718 aa29.76■■■□□ 2.35
CCHCR1-209ENST00000455279 SOS2Q07890 1332 aaPredicted RBP29.75■■■□□ 2.35
CCHCR1-209ENST00000455279 XPCQ01831 940 aaPredicted RBP29.74■■■□□ 2.35
CCHCR1-209ENST00000455279 LRRC59Q96AG4 307 aaKnown RBP29.74■■■□□ 2.35
CCHCR1-209ENST00000455279 RGPD8O14715 1765 aaPredicted RBP29.73■■■□□ 2.35
CCHCR1-209ENST00000455279 SIRT1Q96EB6 747 aa29.73■■■□□ 2.35
CCHCR1-209ENST00000455279 TRAK1Q9UPV9 953 aa29.73■■■□□ 2.35
CCHCR1-209ENST00000455279 DLC1Q96QB1 1528 aa29.71■■■□□ 2.35
CCHCR1-209ENST00000455279 MEX3CQ5U5Q3 659 aaKnown RBP29.71■■■□□ 2.35
CCHCR1-209ENST00000455279 PXDNQ92626 1479 aa29.69■■■□□ 2.34
CCHCR1-209ENST00000455279 FOXO3O43524 673 aa29.69■■■□□ 2.34
CCHCR1-209ENST00000455279 SIN3AQ96ST3 1273 aa29.66■■■□□ 2.34
CCHCR1-209ENST00000455279 HIRIP3Q9BW71 556 aaPredicted RBP29.65■■■□□ 2.34
CCHCR1-209ENST00000455279 USP32Q8NFA0 1604 aa29.64■■■□□ 2.34
CCHCR1-209ENST00000455279 POGKQ9P215 609 aa29.64■■■□□ 2.34
CCHCR1-209ENST00000455279 MINK1Q8N4C8 1332 aaPredicted RBP29.62■■■□□ 2.33
CCHCR1-209ENST00000455279 ARHGEF28Q8N1W1 1705 aaKnown RBP29.62■■■□□ 2.33
CCHCR1-209ENST00000455279 NPHP3Q7Z494 1330 aa29.61■■■□□ 2.33
CCHCR1-209ENST00000455279 ADGRB2O60241 1585 aa29.6■■■□□ 2.33
CCHCR1-209ENST00000455279 ADAMTS2O95450 1211 aa29.6■■■□□ 2.33
CCHCR1-209ENST00000455279 NBPF1Q3BBV0 1214 aa29.59■■■□□ 2.33
CCHCR1-209ENST00000455279 AFF2P51816 1311 aa29.59■■■□□ 2.33
CCHCR1-209ENST00000455279 COL22A1Q8NFW1 1626 aaPredicted RBP29.58■■■□□ 2.33
CCHCR1-209ENST00000455279 C8orf37Q96NL8 207 aa29.58■■■□□ 2.33
CCHCR1-209ENST00000455279 KIF1AQ12756 1690 aa29.57■■■□□ 2.32
CCHCR1-209ENST00000455279 PRR36Q9H6K5 1346 aa29.57■■■□□ 2.32
CCHCR1-209ENST00000455279 STAC3Q96MF2 364 aa29.57■■■□□ 2.32
CCHCR1-209ENST00000455279 L3MBTL2Q969R5 705 aa29.54■■■□□ 2.32
CCHCR1-209ENST00000455279 PHF8Q9UPP1 1060 aa29.54■■■□□ 2.32
CCHCR1-209ENST00000455279 ZNF772Q68DY9 489 aaPredicted RBP29.53■■■□□ 2.32
CCHCR1-209ENST00000455279 KIAA1210Q9ULL0 1709 aa29.52■■■□□ 2.32
CCHCR1-209ENST00000455279 PMFBP1Q8TBY8 1022 aa29.52■■■□□ 2.32
CCHCR1-209ENST00000455279 NEUROD1Q13562 356 aa29.51■■■□□ 2.31
CCHCR1-209ENST00000455279 KRT28Q7Z3Y7 464 aa29.51■■■□□ 2.31
CCHCR1-209ENST00000455279 SPATA31A3Q5VYP0 1347 aa29.48■■■□□ 2.31
CCHCR1-209ENST00000455279 ANKARQ7Z5J8 1434 aa29.48■■■□□ 2.31
CCHCR1-209ENST00000455279 WASLO00401 505 aaPredicted RBP29.47■■■□□ 2.31
CCHCR1-209ENST00000455279 TULP4Q9NRJ4 1543 aa29.46■■■□□ 2.31
CCHCR1-209ENST00000455279 PLEKHG5O94827 1062 aa29.45■■■□□ 2.31
CCHCR1-209ENST00000455279 NGLY1Q96IV0 654 aa29.45■■■□□ 2.31
CCHCR1-209ENST00000455279 TNS3Q68CZ2 1445 aa29.42■■■□□ 2.3
CCHCR1-209ENST00000455279 MARF1Q9Y4F3 1742 aaKnown RBP29.42■■■□□ 2.3
CCHCR1-209ENST00000455279 RXRBP28702 533 aa29.41■■■□□ 2.3
CCHCR1-209ENST00000455279 CABLES1Q8TDN4 633 aa29.41■■■□□ 2.3
CCHCR1-209ENST00000455279 QTRT2Q9H974 415 aaKnown RBP29.41■■■□□ 2.3
CCHCR1-209ENST00000455279 TRPM3Q9HCF6 1732 aaPredicted RBP29.41■■■□□ 2.3
CCHCR1-209ENST00000455279 ATP7BP35670 1465 aa29.41■■■□□ 2.3
CCHCR1-209ENST00000455279 TRPM1Q7Z4N2 1603 aa29.38■■■□□ 2.29
CCHCR1-209ENST00000455279 PSME1Q06323 249 aa29.37■■■□□ 2.29
CCHCR1-209ENST00000455279 TRIM26Q12899 539 aaPredicted RBP29.37■■■□□ 2.29
CCHCR1-209ENST00000455279 CDK19Q9BWU1 502 aa29.37■■■□□ 2.29
CCHCR1-209ENST00000455279 USP21Q9UK80 565 aa29.37■■■□□ 2.29
CCHCR1-209ENST00000455279 ABCA3Q99758 1704 aa29.37■■■□□ 2.29
CCHCR1-209ENST00000455279 RGS12O14924 1447 aa29.37■■■□□ 2.29
CCHCR1-209ENST00000455279 NBPF8Q3BBV2 869 aa29.36■■■□□ 2.29
CCHCR1-209ENST00000455279 FNBP4Q8N3X1 1017 aaPredicted RBP29.36■■■□□ 2.29
CCHCR1-209ENST00000455279 SBNO1A3KN83 1393 aa29.36■■■□□ 2.29
CCHCR1-209ENST00000455279 LMOD2Q6P5Q4 547 aa29.35■■■□□ 2.29
CCHCR1-209ENST00000455279 NUDT16Q96DE0 195 aaKnown RBP29.35■■■□□ 2.29
CCHCR1-209ENST00000455279 BCL9LQ86UU0 1499 aa29.35■■■□□ 2.29
CCHCR1-209ENST00000455279 ALS2Q96Q42 1657 aa29.32■■■□□ 2.28
CCHCR1-209ENST00000455279 EIF3AQ14152 1382 aaKnown RBP29.32■■■□□ 2.28
CCHCR1-209ENST00000455279 TOPAZ1Q8N9V7 1692 aa29.31■■■□□ 2.28
CCHCR1-209ENST00000455279 ATRNO75882 1429 aa29.31■■■□□ 2.28
CCHCR1-209ENST00000455279 QRICH2Q9H0J4 1663 aa29.31■■■□□ 2.28
CCHCR1-209ENST00000455279 RBM6P78332 1123 aaKnown RBP29.3■■■□□ 2.28
CCHCR1-209ENST00000455279 CDK12Q9NYV4 1490 aaPredicted RBP29.29■■■□□ 2.28
CCHCR1-209ENST00000455279 ITSN1Q15811 1721 aa29.29■■■□□ 2.28
CCHCR1-209ENST00000455279 CENPJQ9HC77 1338 aaPredicted RBP29.29■■■□□ 2.28
CCHCR1-209ENST00000455279 NGDNQ8NEJ9 315 aaKnown RBP29.28■■■□□ 2.28
CCHCR1-209ENST00000455279 SLIT2O94813 1529 aa29.27■■■□□ 2.28
CCHCR1-209ENST00000455279 CABP2Q9NPB3 220 aa29.25■■■□□ 2.27
CCHCR1-209ENST00000455279 TRPC5Q9UL62 973 aaPredicted RBP29.25■■■□□ 2.27
CCHCR1-209ENST00000455279 ARHGEF10O15013 1369 aa29.25■■■□□ 2.27
CCHCR1-209ENST00000455279 GPRASP1Q5JY77 1395 aa29.25■■■□□ 2.27
CCHCR1-209ENST00000455279 CRYBG1Q9Y4K1 1723 aa29.24■■■□□ 2.27
CCHCR1-209ENST00000455279 ROCK2O75116 1388 aaKnown RBP29.24■■■□□ 2.27
CCHCR1-209ENST00000455279 UPF1Q92900 1129 aaKnown RBP eCLIP29.22■■■□□ 2.27
CCHCR1-209ENST00000455279 PLCH1Q4KWH8 1693 aa29.21■■■□□ 2.27
CCHCR1-209ENST00000455279 ACEP12821 1306 aa29.21■■■□□ 2.27
CCHCR1-209ENST00000455279 HAP1P54257 671 aaPredicted RBP29.21■■■□□ 2.27
CCHCR1-209ENST00000455279 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.2■■■□□ 2.27
CCHCR1-209ENST00000455279 PAK3O75914 559 aaPredicted RBP29.2■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 193.6 ms