RNA–Protein interactions for RNA: ENST00000455240.1

PTPA-225, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-225ENST00000455240 MPHOSPH9Q99550 1183 aa24.16■■□□□ 1.46
PTPA-225ENST00000455240 RGL3Q3MIN7 710 aa24.14■■□□□ 1.45
PTPA-225ENST00000455240 KNDC1Q76NI1 1749 aa24.14■■□□□ 1.45
PTPA-225ENST00000455240 COL22A1Q8NFW1 1626 aaPredicted RBP24.13■■□□□ 1.45
PTPA-225ENST00000455240 ADAMTS2O95450 1211 aa24.13■■□□□ 1.45
PTPA-225ENST00000455240 LRPPRCP42704 1394 aaKnown RBP24.13■■□□□ 1.45
PTPA-225ENST00000455240 RGS12O14924 1447 aa24.12■■□□□ 1.45
PTPA-225ENST00000455240 PIK3C2GO75747 1445 aa24.12■■□□□ 1.45
PTPA-225ENST00000455240 QTRT2Q9H974 415 aaKnown RBP24.11■■□□□ 1.45
PTPA-225ENST00000455240 NPHP3Q7Z494 1330 aa24.1■■□□□ 1.45
PTPA-225ENST00000455240 RBM6P78332 1123 aaKnown RBP24.1■■□□□ 1.45
PTPA-225ENST00000455240 NGLY1Q96IV0 654 aa24.1■■□□□ 1.45
PTPA-225ENST00000455240 STK26Q9P289 416 aa24.1■■□□□ 1.45
PTPA-225ENST00000455240 PXDNQ92626 1479 aa24.09■■□□□ 1.45
PTPA-225ENST00000455240 ABCC11Q96J66 1382 aa24.09■■□□□ 1.45
PTPA-225ENST00000455240 ESCO1Q5FWF5 840 aa24.09■■□□□ 1.45
PTPA-225ENST00000455240 MYOM2P54296 1465 aa24.07■■□□□ 1.44
PTPA-225ENST00000455240 WAPLQ7Z5K2 1190 aa24.07■■□□□ 1.44
PTPA-225ENST00000455240 ACIN1Q9UKV3 1341 aaKnown RBP24.07■■□□□ 1.44
PTPA-225ENST00000455240 PLEKHH1Q9ULM0 1364 aa24.05■■□□□ 1.44
PTPA-225ENST00000455240 FMN2Q9NZ56 1722 aa24.05■■□□□ 1.44
PTPA-225ENST00000455240 YTHDC2Q9H6S0 1430 aaKnown RBP24.05■■□□□ 1.44
PTPA-225ENST00000455240 TMEM132EQ6IEE7 984 aa24.05■■□□□ 1.44
PTPA-225ENST00000455240 USP21Q9UK80 565 aa24.03■■□□□ 1.44
PTPA-225ENST00000455240 NRXN1Q9ULB1 1477 aa24.02■■□□□ 1.44
PTPA-225ENST00000455240 MARF1Q9Y4F3 1742 aaKnown RBP24.02■■□□□ 1.44
PTPA-225ENST00000455240 FOXO3O43524 673 aa24.02■■□□□ 1.44
PTPA-225ENST00000455240 FNBP4Q8N3X1 1017 aaPredicted RBP24.02■■□□□ 1.44
PTPA-225ENST00000455240 KIF1AQ12756 1690 aa24.02■■□□□ 1.44
PTPA-225ENST00000455240 NUTM2FA1L443 756 aa24■■□□□ 1.43
PTPA-225ENST00000455240 XPCQ01831 940 aaPredicted RBP24■■□□□ 1.43
PTPA-225ENST00000455240 TRPC5Q9UL62 973 aaPredicted RBP24■■□□□ 1.43
PTPA-225ENST00000455240 ATRNO75882 1429 aa24■■□□□ 1.43
PTPA-225ENST00000455240 C14orf93Q9H972 538 aaKnown RBP23.98■■□□□ 1.43
PTPA-225ENST00000455240 SIRT1Q96EB6 747 aa23.97■■□□□ 1.43
PTPA-225ENST00000455240 DHX57Q6P158 1386 aaKnown RBP23.94■■□□□ 1.42
PTPA-225ENST00000455240 ATAD2Q6PL18 1390 aa23.94■■□□□ 1.42
PTPA-225ENST00000455240 BCL9LQ86UU0 1499 aa23.94■■□□□ 1.42
PTPA-225ENST00000455240 RAB3GAP2Q9H2M9 1393 aa23.93■■□□□ 1.42
PTPA-225ENST00000455240 CFAP70Q5T0N1 1121 aa23.93■■□□□ 1.42
PTPA-225ENST00000455240 SPATA31A3Q5VYP0 1347 aa23.92■■□□□ 1.42
PTPA-225ENST00000455240 RGPD8O14715 1765 aaPredicted RBP23.92■■□□□ 1.42
PTPA-225ENST00000455240 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.92■■□□□ 1.42
PTPA-225ENST00000455240 DLC1Q96QB1 1528 aa23.9■■□□□ 1.42
PTPA-225ENST00000455240 USP32Q8NFA0 1604 aa23.88■■□□□ 1.41
PTPA-225ENST00000455240 TNS3Q68CZ2 1445 aa23.87■■□□□ 1.41
PTPA-225ENST00000455240 KRT28Q7Z3Y7 464 aa23.87■■□□□ 1.41
PTPA-225ENST00000455240 PRAM1Q96QH2 718 aa23.87■■□□□ 1.41
PTPA-225ENST00000455240 PHF8Q9UPP1 1060 aa23.87■■□□□ 1.41
PTPA-225ENST00000455240 ADGRB1O14514 1584 aa23.86■■□□□ 1.41
PTPA-225ENST00000455240 ADGRB2O60241 1585 aa23.86■■□□□ 1.41
PTPA-225ENST00000455240 SLIT2O94813 1529 aa23.85■■□□□ 1.41
PTPA-225ENST00000455240 SAFB2Q14151 953 aaKnown RBP eCLIP23.85■■□□□ 1.41
PTPA-225ENST00000455240 GJD4Q96KN9 370 aaPredicted RBP23.84■■□□□ 1.41
PTPA-225ENST00000455240 ANKARQ7Z5J8 1434 aa23.84■■□□□ 1.41
PTPA-225ENST00000455240 PSME1Q06323 249 aa23.83■■□□□ 1.41
PTPA-225ENST00000455240 ABCA3Q99758 1704 aa23.82■■□□□ 1.4
PTPA-225ENST00000455240 SBNO1A3KN83 1393 aa23.82■■□□□ 1.4
PTPA-225ENST00000455240 EP400Q96L91 3159 aa23.82■■□□□ 1.4
PTPA-225ENST00000455240 UNC5CLQ8IV45 518 aa23.82■■□□□ 1.4
PTPA-225ENST00000455240 POGKQ9P215 609 aa23.82■■□□□ 1.4
PTPA-225ENST00000455240 GLI3P10071 1580 aa23.81■■□□□ 1.4
PTPA-225ENST00000455240 RALGAPBQ86X10 1494 aa23.81■■□□□ 1.4
PTPA-225ENST00000455240 ARHGEF10O15013 1369 aa23.79■■□□□ 1.4
PTPA-225ENST00000455240 HAP1P54257 671 aaPredicted RBP23.79■■□□□ 1.4
PTPA-225ENST00000455240 PLCH1Q4KWH8 1693 aa23.79■■□□□ 1.4
PTPA-225ENST00000455240 NWD2Q9ULI1 1742 aa23.78■■□□□ 1.4
PTPA-225ENST00000455240 TRAK1Q9UPV9 953 aa23.76■■□□□ 1.39
PTPA-225ENST00000455240 EIF3AQ14152 1382 aaKnown RBP23.76■■□□□ 1.39
PTPA-225ENST00000455240 CABLES1Q8TDN4 633 aa23.75■■□□□ 1.39
PTPA-225ENST00000455240 TRPM3Q9HCF6 1732 aaPredicted RBP23.75■■□□□ 1.39
PTPA-225ENST00000455240 TULP4Q9NRJ4 1543 aa23.74■■□□□ 1.39
PTPA-225ENST00000455240 LMOD2Q6P5Q4 547 aa23.74■■□□□ 1.39
PTPA-225ENST00000455240 PMFBP1Q8TBY8 1022 aa23.74■■□□□ 1.39
PTPA-225ENST00000455240 DCAF11Q8TEB1 546 aa23.74■■□□□ 1.39
PTPA-225ENST00000455240 KDM2AQ9Y2K7 1162 aa23.74■■□□□ 1.39
PTPA-225ENST00000455240 CCDC125Q86Z20 511 aa23.73■■□□□ 1.39
PTPA-225ENST00000455240 HIRIP3Q9BW71 556 aaPredicted RBP23.73■■□□□ 1.39
PTPA-225ENST00000455240 PLEKHG5O94827 1062 aa23.72■■□□□ 1.39
PTPA-225ENST00000455240 STAC3Q96MF2 364 aa23.72■■□□□ 1.39
PTPA-225ENST00000455240 MINK1Q8N4C8 1332 aaPredicted RBP23.72■■□□□ 1.39
PTPA-225ENST00000455240 BRWD3Q6RI45 1802 aa23.72■■□□□ 1.39
PTPA-225ENST00000455240 ALS2Q96Q42 1657 aa23.71■■□□□ 1.39
PTPA-225ENST00000455240 VPS72Q15906 364 aa23.71■■□□□ 1.39
PTPA-225ENST00000455240 PRR36Q9H6K5 1346 aa23.7■■□□□ 1.38
PTPA-225ENST00000455240 HRCP23327 699 aa23.7■■□□□ 1.38
PTPA-225ENST00000455240 ARHGEF28Q8N1W1 1705 aaKnown RBP23.7■■□□□ 1.38
PTPA-225ENST00000455240 GPRASP1Q5JY77 1395 aa23.69■■□□□ 1.38
PTPA-225ENST00000455240 WASLO00401 505 aaPredicted RBP23.67■■□□□ 1.38
PTPA-225ENST00000455240 NRAPQ86VF7 1730 aa23.67■■□□□ 1.38
PTPA-225ENST00000455240 BLMP54132 1417 aaPredicted RBP23.67■■□□□ 1.38
PTPA-225ENST00000455240 SEPT12Q8IYM1 358 aa23.66■■□□□ 1.38
PTPA-225ENST00000455240 ZRANB1Q9UGI0 708 aa23.66■■□□□ 1.38
PTPA-225ENST00000455240 ITSN1Q15811 1721 aa23.66■■□□□ 1.38
PTPA-225ENST00000455240 CCDC9Q9Y3X0 531 aaKnown RBP23.65■■□□□ 1.38
PTPA-225ENST00000455240 SRCAPQ6ZRS2 3230 aa23.65■■□□□ 1.38
PTPA-225ENST00000455240 FAM83GA6ND36 823 aa23.64■■□□□ 1.37
PTPA-225ENST00000455240 COL14A1Q05707 1796 aaKnown RBP23.64■■□□□ 1.37
PTPA-225ENST00000455240 CRYBG1Q9Y4K1 1723 aa23.64■■□□□ 1.37
PTPA-225ENST00000455240 ATP7BP35670 1465 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms