RNA–Protein interactions for RNA: ENST00000455079.5

ATG9A-216, Transcript of autophagy related 9A, humanhuman

TSL 4

Gene ATG9A, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-216ENST00000455079 PCGF6Q9BYE7 350 aa25.57■■□□□ 1.68
ATG9A-216ENST00000455079 TRAK1Q9UPV9 953 aa25.57■■□□□ 1.68
ATG9A-216ENST00000455079 KIAA1210Q9ULL0 1709 aa25.55■■□□□ 1.68
ATG9A-216ENST00000455079 DLC1Q96QB1 1528 aa25.55■■□□□ 1.68
ATG9A-216ENST00000455079 C1orf167Q5SNV9 1468 aa25.54■■□□□ 1.68
ATG9A-216ENST00000455079 CDC42BPGQ6DT37 1551 aa25.54■■□□□ 1.68
ATG9A-216ENST00000455079 SAFB2Q14151 953 aaKnown RBP eCLIP25.54■■□□□ 1.68
ATG9A-216ENST00000455079 PRAM1Q96QH2 718 aa25.54■■□□□ 1.68
ATG9A-216ENST00000455079 POGKQ9P215 609 aa25.52■■□□□ 1.68
ATG9A-216ENST00000455079 AHDC1Q5TGY3 1603 aaPredicted RBP25.52■■□□□ 1.68
ATG9A-216ENST00000455079 COL16A1Q07092 1604 aaPredicted RBP25.51■■□□□ 1.67
ATG9A-216ENST00000455079 NBPF1Q3BBV0 1214 aa25.5■■□□□ 1.67
ATG9A-216ENST00000455079 ORAI2Q96SN7 254 aa25.49■■□□□ 1.67
ATG9A-216ENST00000455079 NHSL1Q5SYE7 1610 aa25.48■■□□□ 1.67
ATG9A-216ENST00000455079 NUTM2FA1L443 756 aa25.48■■□□□ 1.67
ATG9A-216ENST00000455079 FMN2Q9NZ56 1722 aa25.48■■□□□ 1.67
ATG9A-216ENST00000455079 MED1Q15648 1581 aaPredicted RBP25.48■■□□□ 1.67
ATG9A-216ENST00000455079 ARHGEF28Q8N1W1 1705 aaKnown RBP25.47■■□□□ 1.67
ATG9A-216ENST00000455079 DDX17Q92841 729 aaKnown RBP25.47■■□□□ 1.67
ATG9A-216ENST00000455079 RGPD8O14715 1765 aaPredicted RBP25.45■■□□□ 1.66
ATG9A-216ENST00000455079 ESCO1Q5FWF5 840 aa25.43■■□□□ 1.66
ATG9A-216ENST00000455079 JCADQ9P266 1359 aa25.43■■□□□ 1.66
ATG9A-216ENST00000455079 MINK1Q8N4C8 1332 aaPredicted RBP25.42■■□□□ 1.66
ATG9A-216ENST00000455079 TRPM1Q7Z4N2 1603 aa25.41■■□□□ 1.66
ATG9A-216ENST00000455079 HIRIP3Q9BW71 556 aaPredicted RBP25.41■■□□□ 1.66
ATG9A-216ENST00000455079 TONSLQ96HA7 1378 aa25.41■■□□□ 1.66
ATG9A-216ENST00000455079 ADGRB2O60241 1585 aa25.39■■□□□ 1.65
ATG9A-216ENST00000455079 NBPF8Q3BBV2 869 aa25.38■■□□□ 1.65
ATG9A-216ENST00000455079 SHPRHQ149N8 1683 aa25.37■■□□□ 1.65
ATG9A-216ENST00000455079 LRRC59Q96AG4 307 aaKnown RBP25.35■■□□□ 1.65
ATG9A-216ENST00000455079 SOS2Q07890 1332 aaPredicted RBP25.34■■□□□ 1.65
ATG9A-216ENST00000455079 USP32Q8NFA0 1604 aa25.34■■□□□ 1.65
ATG9A-216ENST00000455079 WASLO00401 505 aaPredicted RBP25.33■■□□□ 1.65
ATG9A-216ENST00000455079 FOXO3O43524 673 aa25.33■■□□□ 1.65
ATG9A-216ENST00000455079 PHF23Q9BUL5 403 aaPredicted RBP25.32■■□□□ 1.64
ATG9A-216ENST00000455079 KIF1AQ12756 1690 aa25.32■■□□□ 1.64
ATG9A-216ENST00000455079 ROCK2O75116 1388 aaKnown RBP25.31■■□□□ 1.64
ATG9A-216ENST00000455079 NPHP3Q7Z494 1330 aa25.31■■□□□ 1.64
ATG9A-216ENST00000455079 XPCQ01831 940 aaPredicted RBP25.3■■□□□ 1.64
ATG9A-216ENST00000455079 PHF8Q9UPP1 1060 aa25.3■■□□□ 1.64
ATG9A-216ENST00000455079 SPATA31A6Q5VVP1 1343 aa25.3■■□□□ 1.64
ATG9A-216ENST00000455079 ANKARQ7Z5J8 1434 aa25.29■■□□□ 1.64
ATG9A-216ENST00000455079 PRR36Q9H6K5 1346 aa25.28■■□□□ 1.64
ATG9A-216ENST00000455079 CENPJQ9HC77 1338 aaPredicted RBP25.28■■□□□ 1.64
ATG9A-216ENST00000455079 PNPLA6Q8IY17 1366 aa25.28■■□□□ 1.64
ATG9A-216ENST00000455079 TULP4Q9NRJ4 1543 aa25.27■■□□□ 1.64
ATG9A-216ENST00000455079 EIF3AQ14152 1382 aaKnown RBP25.27■■□□□ 1.64
ATG9A-216ENST00000455079 PXDNQ92626 1479 aa25.27■■□□□ 1.64
ATG9A-216ENST00000455079 LRP6O75581 1613 aa25.26■■□□□ 1.63
ATG9A-216ENST00000455079 QRICH2Q9H0J4 1663 aa25.26■■□□□ 1.63
ATG9A-216ENST00000455079 NUTM2BA6NNL0 878 aaPredicted RBP25.26■■□□□ 1.63
ATG9A-216ENST00000455079 NUTM2EB1AL46 878 aaPredicted RBP25.26■■□□□ 1.63
ATG9A-216ENST00000455079 NUTM2AQ8IVF1 878 aaPredicted RBP25.26■■□□□ 1.63
ATG9A-216ENST00000455079 PMFBP1Q8TBY8 1022 aa25.26■■□□□ 1.63
ATG9A-216ENST00000455079 CDK19Q9BWU1 502 aa25.26■■□□□ 1.63
ATG9A-216ENST00000455079 KRT28Q7Z3Y7 464 aa25.24■■□□□ 1.63
ATG9A-216ENST00000455079 GPRASP1Q5JY77 1395 aa25.23■■□□□ 1.63
ATG9A-216ENST00000455079 CLSPNQ9HAW4 1339 aa25.23■■□□□ 1.63
ATG9A-216ENST00000455079 RALGAPBQ86X10 1494 aa25.22■■□□□ 1.63
ATG9A-216ENST00000455079 NUDT16Q96DE0 195 aaKnown RBP25.22■■□□□ 1.63
ATG9A-216ENST00000455079 RGS17Q9UGC6 210 aaPredicted RBP25.22■■□□□ 1.63
ATG9A-216ENST00000455079 MEX3CQ5U5Q3 659 aaKnown RBP25.21■■□□□ 1.63
ATG9A-216ENST00000455079 CARD11Q9BXL7 1154 aa25.21■■□□□ 1.63
ATG9A-216ENST00000455079 ITSN1Q15811 1721 aa25.2■■□□□ 1.63
ATG9A-216ENST00000455079 CCER1Q8TC90 406 aaPredicted RBP25.2■■□□□ 1.62
ATG9A-216ENST00000455079 PSME1Q06323 249 aa25.19■■□□□ 1.62
ATG9A-216ENST00000455079 ATP7BP35670 1465 aa25.19■■□□□ 1.62
ATG9A-216ENST00000455079 COL22A1Q8NFW1 1626 aaPredicted RBP25.17■■□□□ 1.62
ATG9A-216ENST00000455079 SPATA31A3Q5VYP0 1347 aa25.16■■□□□ 1.62
ATG9A-216ENST00000455079 SRPK2P78362 688 aaKnown RBP25.16■■□□□ 1.62
ATG9A-216ENST00000455079 NGDNQ8NEJ9 315 aaKnown RBP25.15■■□□□ 1.62
ATG9A-216ENST00000455079 CABP2Q9NPB3 220 aa25.15■■□□□ 1.62
ATG9A-216ENST00000455079 TOPAZ1Q8N9V7 1692 aa25.14■■□□□ 1.62
ATG9A-216ENST00000455079 CCDC61Q9Y6R9 512 aa25.13■■□□□ 1.61
ATG9A-216ENST00000455079 TIMELESSQ9UNS1 1208 aa25.12■■□□□ 1.61
ATG9A-216ENST00000455079 SBNO1A3KN83 1393 aa25.12■■□□□ 1.61
ATG9A-216ENST00000455079 TRPM3Q9HCF6 1732 aaPredicted RBP25.12■■□□□ 1.61
ATG9A-216ENST00000455079 TNS3Q68CZ2 1445 aa25.12■■□□□ 1.61
ATG9A-216ENST00000455079 ADAMTS2O95450 1211 aa25.11■■□□□ 1.61
ATG9A-216ENST00000455079 POTEAQ6S8J7 498 aa25.11■■□□□ 1.61
ATG9A-216ENST00000455079 EVC2Q86UK5 1308 aa25.11■■□□□ 1.61
ATG9A-216ENST00000455079 LMOD2Q6P5Q4 547 aa25.1■■□□□ 1.61
ATG9A-216ENST00000455079 C8orf37Q96NL8 207 aa25.09■■□□□ 1.61
ATG9A-216ENST00000455079 PLEKHG3A1L390 1219 aa25.08■■□□□ 1.61
ATG9A-216ENST00000455079 ACEP12821 1306 aa25.07■■□□□ 1.6
ATG9A-216ENST00000455079 PPIP5K1Q6PFW1 1433 aa25.06■■□□□ 1.6
ATG9A-216ENST00000455079 PLEKHG5O94827 1062 aa25.06■■□□□ 1.6
ATG9A-216ENST00000455079 AFF2P51816 1311 aa25.06■■□□□ 1.6
ATG9A-216ENST00000455079 MARF1Q9Y4F3 1742 aaKnown RBP25.06■■□□□ 1.6
ATG9A-216ENST00000455079 ALS2Q96Q42 1657 aa25.05■■□□□ 1.6
ATG9A-216ENST00000455079 POLR3AO14802 1390 aaPredicted RBP25.05■■□□□ 1.6
ATG9A-216ENST00000455079 PAK3O75914 559 aaPredicted RBP25.04■■□□□ 1.6
ATG9A-216ENST00000455079 ZNF772Q68DY9 489 aaPredicted RBP25.04■■□□□ 1.6
ATG9A-216ENST00000455079 ARHGEF10O15013 1369 aa25.04■■□□□ 1.6
ATG9A-216ENST00000455079 CABLES1Q8TDN4 633 aa25.03■■□□□ 1.6
ATG9A-216ENST00000455079 NGLY1Q96IV0 654 aa25.03■■□□□ 1.6
ATG9A-216ENST00000455079 SBNO2Q9Y2G9 1366 aa25.03■■□□□ 1.6
ATG9A-216ENST00000455079 CABP1Q9NZU7 370 aa25.02■■□□□ 1.6
ATG9A-216ENST00000455079 ST20-MTHFSA0A0A6YYL1 179 aa25■■□□□ 1.59
ATG9A-216ENST00000455079 ABCA3Q99758 1704 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms