RNA–Protein interactions for RNA: ENST00000454909.6

SATB1-209, Transcript of SATB homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SATB1, Length 3,755 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-209ENST00000454909 PARD3Q8TEW0 1356 aa8.41□□□□□ -1.06
SATB1-209ENST00000454909 PRKRIP1Q9H875 184 aaPredicted RBP8.41□□□□□ -1.06
SATB1-209ENST00000454909 RALBP1Q15311 655 aa8.4□□□□□ -1.06
SATB1-209ENST00000454909 TBX22Q9Y458 520 aa8.4□□□□□ -1.06
SATB1-209ENST00000454909 ATP7BP35670 1465 aa8.4□□□□□ -1.06
SATB1-209ENST00000454909 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.4□□□□□ -1.07
SATB1-209ENST00000454909 METP08581 1390 aa8.4□□□□□ -1.07
SATB1-209ENST00000454909 TRAK1Q9UPV9 953 aa8.4□□□□□ -1.07
SATB1-209ENST00000454909 TMEM132EQ6IEE7 984 aa8.39□□□□□ -1.07
SATB1-209ENST00000454909 FMN2Q9NZ56 1722 aa8.39□□□□□ -1.07
SATB1-209ENST00000454909 NSD2O96028 1365 aa8.38□□□□□ -1.07
SATB1-209ENST00000454909 PER1O15534 1290 aaPredicted RBP8.38□□□□□ -1.07
SATB1-209ENST00000454909 NUTM2DQ5VT03 806 aaPredicted RBP8.38□□□□□ -1.07
SATB1-209ENST00000454909 INSRP06213 1382 aa8.38□□□□□ -1.07
SATB1-209ENST00000454909 CDC42BPGQ6DT37 1551 aa8.38□□□□□ -1.07
SATB1-209ENST00000454909 TXNDC2Q86VQ3 553 aa8.38□□□□□ -1.07
SATB1-209ENST00000454909 BRD4O60885 1362 aaPredicted RBP8.38□□□□□ -1.07
SATB1-209ENST00000454909 LTKP29376 864 aa8.38□□□□□ -1.07
SATB1-209ENST00000454909 NRKQ7Z2Y5 1582 aa8.37□□□□□ -1.07
SATB1-209ENST00000454909 ANKRD36BQ8N2N9 1353 aa8.37□□□□□ -1.07
SATB1-209ENST00000454909 PTPRUQ92729 1446 aa8.37□□□□□ -1.07
SATB1-209ENST00000454909 MYBBP1AQ9BQG0 1328 aaKnown RBP8.37□□□□□ -1.07
SATB1-209ENST00000454909 NPHP4O75161 1426 aaPredicted RBP8.37□□□□□ -1.07
SATB1-209ENST00000454909 NALCNQ8IZF0 1738 aa8.37□□□□□ -1.07
SATB1-209ENST00000454909 USP54Q70EL1 1684 aa8.36□□□□□ -1.07
SATB1-209ENST00000454909 NKTRP30414 1462 aaKnown RBP8.36□□□□□ -1.07
SATB1-209ENST00000454909 PRAM1Q96QH2 718 aa8.36□□□□□ -1.07
SATB1-209ENST00000454909 ANKLE2Q86XL3 938 aa8.35□□□□□ -1.07
SATB1-209ENST00000454909 PANK3Q9H999 370 aa8.35□□□□□ -1.07
SATB1-209ENST00000454909 POGKQ9P215 609 aa8.35□□□□□ -1.07
SATB1-209ENST00000454909 POLR3GLQ9BT43 218 aa8.35□□□□□ -1.07
SATB1-209ENST00000454909 CD163L1Q9NR16 1453 aa8.35□□□□□ -1.07
SATB1-209ENST00000454909 ANKARQ7Z5J8 1434 aa8.34□□□□□ -1.07
SATB1-209ENST00000454909 ROBO2Q9HCK4 1378 aa8.34□□□□□ -1.07
SATB1-209ENST00000454909 LRRC7Q96NW7 1537 aa8.34□□□□□ -1.08
SATB1-209ENST00000454909 KNSTRNQ9Y448 316 aa8.34□□□□□ -1.08
SATB1-209ENST00000454909 PLEKHH1Q9ULM0 1364 aa8.33□□□□□ -1.08
SATB1-209ENST00000454909 AMER1Q5JTC6 1135 aaPredicted RBP8.33□□□□□ -1.08
SATB1-209ENST00000454909 STK26Q9P289 416 aa8.33□□□□□ -1.08
SATB1-209ENST00000454909 NSD3Q9BZ95 1437 aa8.33□□□□□ -1.08
SATB1-209ENST00000454909 NLRP13Q86W25 1043 aa8.32□□□□□ -1.08
SATB1-209ENST00000454909 CPSF1Q10570 1443 aaKnown RBP8.32□□□□□ -1.08
SATB1-209ENST00000454909 STRCQ7RTU9 1775 aa8.32□□□□□ -1.08
SATB1-209ENST00000454909 LMTK3Q96Q04 1460 aa8.32□□□□□ -1.08
SATB1-209ENST00000454909 CGNL1Q0VF96 1302 aa8.32□□□□□ -1.08
SATB1-209ENST00000454909 KIF1AQ12756 1690 aa8.31□□□□□ -1.08
SATB1-209ENST00000454909 NCOA3Q9Y6Q9 1424 aa8.31□□□□□ -1.08
SATB1-209ENST00000454909 WASLO00401 505 aaPredicted RBP8.31□□□□□ -1.08
SATB1-209ENST00000454909 A0A1W2PP64 1363 aa8.31□□□□□ -1.08
SATB1-209ENST00000454909 TERF2IPQ9NYB0 399 aa8.31□□□□□ -1.08
SATB1-209ENST00000454909 EDC4Q6P2E9 1401 aaKnown RBP8.31□□□□□ -1.08
SATB1-209ENST00000454909 MINK1Q8N4C8 1332 aaPredicted RBP8.31□□□□□ -1.08
SATB1-209ENST00000454909 BCANQ96GW7 911 aa8.31□□□□□ -1.08
SATB1-209ENST00000454909 SHPRHQ149N8 1683 aa8.3□□□□□ -1.08
SATB1-209ENST00000454909 RGPD8O14715 1765 aaPredicted RBP8.3□□□□□ -1.08
SATB1-209ENST00000454909 CDK19Q9BWU1 502 aa8.3□□□□□ -1.08
SATB1-209ENST00000454909 PPIP5K1Q6PFW1 1433 aa8.3□□□□□ -1.08
SATB1-209ENST00000454909 ADGRL3Q9HAR2 1447 aa8.3□□□□□ -1.08
SATB1-209ENST00000454909 SRPK2P78362 688 aaKnown RBP8.3□□□□□ -1.08
SATB1-209ENST00000454909 STRCP1A6NGW2 1772 aa8.29□□□□□ -1.08
SATB1-209ENST00000454909 MRS2Q9HD23 443 aa8.29□□□□□ -1.08
SATB1-209ENST00000454909 AMOTL2Q9Y2J4 779 aa8.29□□□□□ -1.08
SATB1-209ENST00000454909 BLMP54132 1417 aaPredicted RBP8.29□□□□□ -1.08
SATB1-209ENST00000454909 HDGFL2Q7Z4V5 671 aaPredicted RBP8.28□□□□□ -1.08
SATB1-209ENST00000454909 CARD14Q9BXL6 1004 aa8.28□□□□□ -1.08
SATB1-209ENST00000454909 DCCP43146 1447 aa8.28□□□□□ -1.08
SATB1-209ENST00000454909 WAPLQ7Z5K2 1190 aa8.28□□□□□ -1.08
SATB1-209ENST00000454909 CABP2Q9NPB3 220 aa8.28□□□□□ -1.08
SATB1-209ENST00000454909 SLC26A8Q96RN1 970 aa8.28□□□□□ -1.08
SATB1-209ENST00000454909 POLR3AO14802 1390 aaPredicted RBP8.27□□□□□ -1.08
SATB1-209ENST00000454909 PLPPR3Q6T4P5 718 aa8.27□□□□□ -1.09
SATB1-209ENST00000454909 SLC12A5Q9H2X9 1139 aa8.27□□□□□ -1.09
SATB1-209ENST00000454909 SMG6Q86US8 1419 aaKnown RBP8.27□□□□□ -1.09
SATB1-209ENST00000454909 XIRP1Q702N8 1843 aaKnown RBP8.27□□□□□ -1.09
SATB1-209ENST00000454909 KCNA6P17658 529 aa8.27□□□□□ -1.09
SATB1-209ENST00000454909 KDM4FA0A1W2PPD8 638 aa8.26□□□□□ -1.09
SATB1-209ENST00000454909 TMC1Q8TDI8 760 aa8.26□□□□□ -1.09
SATB1-209ENST00000454909 PLEKHG3A1L390 1219 aa8.26□□□□□ -1.09
SATB1-209ENST00000454909 PPP2R1AP30153 589 aa8.26□□□□□ -1.09
SATB1-209ENST00000454909 SAFB2Q14151 953 aaKnown RBP eCLIP8.26□□□□□ -1.09
SATB1-209ENST00000454909 CCDC61Q9Y6R9 512 aa8.26□□□□□ -1.09
SATB1-209ENST00000454909 MARF1Q9Y4F3 1742 aaKnown RBP8.26□□□□□ -1.09
SATB1-209ENST00000454909 PNISRQ8TF01 805 aaKnown RBP8.26□□□□□ -1.09
SATB1-209ENST00000454909 ZNF692Q9BU19 519 aaPredicted RBP8.26□□□□□ -1.09
SATB1-209ENST00000454909 NUDT16Q96DE0 195 aaKnown RBP8.25□□□□□ -1.09
SATB1-209ENST00000454909 CC2D1BQ5T0F9 858 aaKnown RBP8.25□□□□□ -1.09
SATB1-209ENST00000454909 SSH2Q76I76 1423 aa8.25□□□□□ -1.09
SATB1-209ENST00000454909 ERICH6Q7L0X2 663 aa8.25□□□□□ -1.09
SATB1-209ENST00000454909 USP6P35125 1406 aa8.25□□□□□ -1.09
SATB1-209ENST00000454909 PIK3C2AO00443 1686 aa8.24□□□□□ -1.09
SATB1-209ENST00000454909 MAP2P11137 1827 aaKnown RBP8.24□□□□□ -1.09
SATB1-209ENST00000454909 ZBED9Q6R2W3 1325 aa8.24□□□□□ -1.09
SATB1-209ENST00000454909 PRR36Q9H6K5 1346 aa8.24□□□□□ -1.09
SATB1-209ENST00000454909 COL3A1P02461 1466 aaPredicted RBP8.24□□□□□ -1.09
SATB1-209ENST00000454909 CCDC184Q52MB2 194 aa8.24□□□□□ -1.09
SATB1-209ENST00000454909 TRPM3Q9HCF6 1732 aaPredicted RBP8.24□□□□□ -1.09
SATB1-209ENST00000454909 AATKQ6ZMQ8 1374 aa8.24□□□□□ -1.09
SATB1-209ENST00000454909 PHRF1Q9P1Y6 1649 aaKnown RBP8.24□□□□□ -1.09
SATB1-209ENST00000454909 TTC21AQ8NDW8 1320 aa8.23□□□□□ -1.09
SATB1-209ENST00000454909 NCKAP5LQ9HCH0 1330 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms