RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 YTHDC2Q9H6S0 1430 aaKnown RBP18.04■□□□□ 0.48
CLK3-203ENST00000454830 TERF2IPQ9NYB0 399 aa18.04■□□□□ 0.48
CLK3-203ENST00000454830 KIF13AQ9H1H9 1805 aa18.04■□□□□ 0.48
CLK3-203ENST00000454830 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.04■□□□□ 0.48
CLK3-203ENST00000454830 CFAP53Q96M91 514 aa18.04■□□□□ 0.48
CLK3-203ENST00000454830 QRICH2Q9H0J4 1663 aa18.04■□□□□ 0.48
CLK3-203ENST00000454830 AGLP35573 1532 aa18.03■□□□□ 0.48
CLK3-203ENST00000454830 MTHFSP49914 203 aa18.03■□□□□ 0.48
CLK3-203ENST00000454830 HDGFL2Q7Z4V5 671 aaPredicted RBP18.02■□□□□ 0.48
CLK3-203ENST00000454830 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.02■□□□□ 0.48
CLK3-203ENST00000454830 ERICH6BQ5W0A0 696 aa18.02■□□□□ 0.48
CLK3-203ENST00000454830 TNRQ92752 1358 aa18.02■□□□□ 0.47
CLK3-203ENST00000454830 CABP1Q9NZU7 370 aa18.02■□□□□ 0.47
CLK3-203ENST00000454830 TMEM131LA2VDJ0 1609 aa18.01■□□□□ 0.47
CLK3-203ENST00000454830 PPM1GO15355 546 aaPredicted RBP18.01■□□□□ 0.47
CLK3-203ENST00000454830 NUTM2FA1L443 756 aa18.01■□□□□ 0.47
CLK3-203ENST00000454830 NPC1L1Q9UHC9 1359 aa18.01■□□□□ 0.47
CLK3-203ENST00000454830 ZFYVE9O95405 1425 aa18■□□□□ 0.47
CLK3-203ENST00000454830 ARHGEF40Q8TER5 1519 aa18■□□□□ 0.47
CLK3-203ENST00000454830 MYOM1P52179 1685 aa18■□□□□ 0.47
CLK3-203ENST00000454830 PLIN1O60240 522 aa18■□□□□ 0.47
CLK3-203ENST00000454830 RRP7AQ9Y3A4 280 aaKnown RBP18■□□□□ 0.47
CLK3-203ENST00000454830 A2ML1A8K2U0 1454 aa17.99■□□□□ 0.47
CLK3-203ENST00000454830 U2SURPO15042 1029 aaKnown RBP17.99■□□□□ 0.47
CLK3-203ENST00000454830 GOLGA2Q08379 1002 aa17.99■□□□□ 0.47
CLK3-203ENST00000454830 RRP1P56182 461 aaKnown RBP17.98■□□□□ 0.47
CLK3-203ENST00000454830 U2AF1L5P0DN76 240 aaPredicted RBP17.98■□□□□ 0.47
CLK3-203ENST00000454830 U2AF1Q01081 240 aaKnown RBP eCLIP17.98■□□□□ 0.47
CLK3-203ENST00000454830 SLC26A8Q96RN1 970 aa17.97■□□□□ 0.47
CLK3-203ENST00000454830 ANKRD36BQ8N2N9 1353 aa17.97■□□□□ 0.47
CLK3-203ENST00000454830 ATAD2Q6PL18 1390 aa17.96■□□□□ 0.47
CLK3-203ENST00000454830 BLMP54132 1417 aaPredicted RBP17.96■□□□□ 0.47
CLK3-203ENST00000454830 EID1Q9Y6B2 187 aa17.95■□□□□ 0.46
CLK3-203ENST00000454830 A0A1W2PP64 1363 aa17.95■□□□□ 0.46
CLK3-203ENST00000454830 PLEKHH1Q9ULM0 1364 aa17.95■□□□□ 0.46
CLK3-203ENST00000454830 TULP4Q9NRJ4 1543 aa17.95■□□□□ 0.46
CLK3-203ENST00000454830 ALKQ9UM73 1620 aa17.95■□□□□ 0.46
CLK3-203ENST00000454830 REREQ9P2R6 1566 aa17.94■□□□□ 0.46
CLK3-203ENST00000454830 MYO3AQ8NEV4 1616 aa17.94■□□□□ 0.46
CLK3-203ENST00000454830 EXOC6Q8TAG9 804 aa17.93■□□□□ 0.46
CLK3-203ENST00000454830 PUS7Q96PZ0 661 aaKnown RBP17.93■□□□□ 0.46
CLK3-203ENST00000454830 ARHGEF28Q8N1W1 1705 aaKnown RBP17.92■□□□□ 0.46
CLK3-203ENST00000454830 METP08581 1390 aa17.92■□□□□ 0.46
CLK3-203ENST00000454830 SPATA31D1Q6ZQQ2 1576 aa17.91■□□□□ 0.46
CLK3-203ENST00000454830 PTPRMP28827 1452 aa17.9■□□□□ 0.46
CLK3-203ENST00000454830 NCKAP5LQ9HCH0 1330 aa17.9■□□□□ 0.46
CLK3-203ENST00000454830 FYB1O15117 783 aa17.89■□□□□ 0.46
CLK3-203ENST00000454830 FBLN1P23142 703 aa17.89■□□□□ 0.46
CLK3-203ENST00000454830 LTKP29376 864 aa17.89■□□□□ 0.45
CLK3-203ENST00000454830 WASLO00401 505 aaPredicted RBP17.88■□□□□ 0.45
CLK3-203ENST00000454830 TCP11L2Q8N4U5 519 aa17.88■□□□□ 0.45
CLK3-203ENST00000454830 POLR3AO14802 1390 aaPredicted RBP17.88■□□□□ 0.45
CLK3-203ENST00000454830 TMEM2Q9UHN6 1383 aa17.88■□□□□ 0.45
CLK3-203ENST00000454830 RUNDC1Q96C34 613 aa17.87■□□□□ 0.45
CLK3-203ENST00000454830 CANXP27824 592 aaKnown RBP17.87■□□□□ 0.45
CLK3-203ENST00000454830 NUDT16Q96DE0 195 aaKnown RBP17.87■□□□□ 0.45
CLK3-203ENST00000454830 DUSP27Q5VZP5 1158 aa17.86■□□□□ 0.45
CLK3-203ENST00000454830 RNF123Q5XPI4 1314 aa17.86■□□□□ 0.45
CLK3-203ENST00000454830 NINLQ9Y2I6 1382 aa17.85■□□□□ 0.45
CLK3-203ENST00000454830 SOX12O15370 315 aa17.85■□□□□ 0.45
CLK3-203ENST00000454830 ABCC11Q96J66 1382 aa17.85■□□□□ 0.45
CLK3-203ENST00000454830 SPINK5Q9NQ38 1064 aaPredicted RBP17.85■□□□□ 0.45
CLK3-203ENST00000454830 RBM19Q9Y4C8 960 aaKnown RBP17.85■□□□□ 0.45
CLK3-203ENST00000454830 INSRP06213 1382 aa17.85■□□□□ 0.45
CLK3-203ENST00000454830 MAPK8IP3Q9UPT6 1336 aa17.85■□□□□ 0.45
CLK3-203ENST00000454830 SLFN5Q08AF3 891 aa17.84■□□□□ 0.45
CLK3-203ENST00000454830 NSD2O96028 1365 aa17.84■□□□□ 0.45
CLK3-203ENST00000454830 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.84■□□□□ 0.45
CLK3-203ENST00000454830 CRBNQ96SW2 442 aa17.84■□□□□ 0.45
CLK3-203ENST00000454830 DMRT2Q9Y5R5 561 aa17.83■□□□□ 0.45
CLK3-203ENST00000454830 E9PSI1 815 aa17.83■□□□□ 0.44
CLK3-203ENST00000454830 THEMISQ8N1K5 641 aaPredicted RBP17.83■□□□□ 0.44
CLK3-203ENST00000454830 NEFMP07197 916 aa17.82■□□□□ 0.44
CLK3-203ENST00000454830 CCDC61Q9Y6R9 512 aa17.82■□□□□ 0.44
CLK3-203ENST00000454830 NME9Q86XW9 330 aa17.82■□□□□ 0.44
CLK3-203ENST00000454830 WWC1Q8IX03 1113 aa17.82■□□□□ 0.44
CLK3-203ENST00000454830 DIAPH1O60610 1272 aaKnown RBP17.81■□□□□ 0.44
CLK3-203ENST00000454830 ZRANB1Q9UGI0 708 aa17.81■□□□□ 0.44
CLK3-203ENST00000454830 C20orf194Q5TEA3 1177 aa17.8■□□□□ 0.44
CLK3-203ENST00000454830 PPIP5K1Q6PFW1 1433 aa17.8■□□□□ 0.44
CLK3-203ENST00000454830 AMOTL2Q9Y2J4 779 aa17.8■□□□□ 0.44
CLK3-203ENST00000454830 FRAT1Q92837 279 aaPredicted RBP17.79■□□□□ 0.44
CLK3-203ENST00000454830 COG3Q96JB2 828 aa17.79■□□□□ 0.44
CLK3-203ENST00000454830 BCAR3O75815 825 aa17.78■□□□□ 0.44
CLK3-203ENST00000454830 ZNF521Q96K83 1311 aa17.78■□□□□ 0.44
CLK3-203ENST00000454830 PMFBP1Q8TBY8 1022 aa17.77■□□□□ 0.44
CLK3-203ENST00000454830 ROBO2Q9HCK4 1378 aa17.77■□□□□ 0.43
CLK3-203ENST00000454830 HMOX1P09601 288 aa17.76■□□□□ 0.43
CLK3-203ENST00000454830 NGEFQ8N5V2 710 aa17.76■□□□□ 0.43
CLK3-203ENST00000454830 BCL2L13Q9BXK5 485 aa17.76■□□□□ 0.43
CLK3-203ENST00000454830 EMILIN1Q9Y6C2 1016 aa17.76■□□□□ 0.43
CLK3-203ENST00000454830 RRS1Q15050 365 aaKnown RBP17.76■□□□□ 0.43
CLK3-203ENST00000454830 NGDNQ8NEJ9 315 aaKnown RBP17.74■□□□□ 0.43
CLK3-203ENST00000454830 LAS1LQ9Y4W2 734 aaKnown RBP17.74■□□□□ 0.43
CLK3-203ENST00000454830 RBM33Q96EV2 1170 aaKnown RBP17.73■□□□□ 0.43
CLK3-203ENST00000454830 C14orf37Q86TY3 774 aa17.73■□□□□ 0.43
CLK3-203ENST00000454830 NLRP1Q9C000 1473 aa17.72■□□□□ 0.43
CLK3-203ENST00000454830 PLEKHG5O94827 1062 aa17.72■□□□□ 0.43
CLK3-203ENST00000454830 POLKQ9UBT6 870 aa17.72■□□□□ 0.43
CLK3-203ENST00000454830 CD163L1Q9NR16 1453 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms