RNA–Protein interactions for RNA: ENST00000454608.3

USP41-202, Transcript of ubiquitin specific peptidase 41, humanhuman

APPRIS P5 TSL 5 BASIC

Gene USP41, Length 1,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-202ENST00000454608 PRAG1Q86YV5 1406 aa16.02■□□□□ 0.15
USP41-202ENST00000454608 GJD4Q96KN9 370 aaPredicted RBP16■□□□□ 0.15
USP41-202ENST00000454608 NPHP3Q7Z494 1330 aa15.99■□□□□ 0.15
USP41-202ENST00000454608 CLTCL1P53675 1640 aa15.99■□□□□ 0.15
USP41-202ENST00000454608 BLMP54132 1417 aaPredicted RBP15.99■□□□□ 0.15
USP41-202ENST00000454608 HFM1A2PYH4 1435 aa15.98■□□□□ 0.15
USP41-202ENST00000454608 ROBO2Q9HCK4 1378 aa15.98■□□□□ 0.15
USP41-202ENST00000454608 LRP5O75197 1615 aa15.97■□□□□ 0.15
USP41-202ENST00000454608 VGFO15240 615 aaPredicted RBP15.97■□□□□ 0.15
USP41-202ENST00000454608 CDC42BPGQ6DT37 1551 aa15.96■□□□□ 0.15
USP41-202ENST00000454608 PXDNQ92626 1479 aa15.96■□□□□ 0.14
USP41-202ENST00000454608 BRWD3Q6RI45 1802 aa15.96■□□□□ 0.14
USP41-202ENST00000454608 LRPPRCP42704 1394 aaKnown RBP15.95■□□□□ 0.14
USP41-202ENST00000454608 SF3B2Q13435 895 aaKnown RBP15.94■□□□□ 0.14
USP41-202ENST00000454608 ESCO1Q5FWF5 840 aa15.94■□□□□ 0.14
USP41-202ENST00000454608 GLI3P10071 1580 aa15.94■□□□□ 0.14
USP41-202ENST00000454608 UNC5CLQ8IV45 518 aa15.93■□□□□ 0.14
USP41-202ENST00000454608 RALGAPBQ86X10 1494 aa15.92■□□□□ 0.14
USP41-202ENST00000454608 SLIT2O94813 1529 aa15.92■□□□□ 0.14
USP41-202ENST00000454608 RPGRIP1LQ68CZ1 1315 aa15.92■□□□□ 0.14
USP41-202ENST00000454608 PPLO60437 1756 aa15.91■□□□□ 0.14
USP41-202ENST00000454608 FOXO3O43524 673 aa15.9■□□□□ 0.14
USP41-202ENST00000454608 DEFB132Q7Z7B7 95 aa15.89■□□□□ 0.13
USP41-202ENST00000454608 NWD2Q9ULI1 1742 aa15.88■□□□□ 0.13
USP41-202ENST00000454608 USP32Q8NFA0 1604 aa15.88■□□□□ 0.13
USP41-202ENST00000454608 KIF1AQ12756 1690 aa15.88■□□□□ 0.13
USP41-202ENST00000454608 ITGAEP38570 1179 aa15.87■□□□□ 0.13
USP41-202ENST00000454608 XPCQ01831 940 aaPredicted RBP15.86■□□□□ 0.13
USP41-202ENST00000454608 SPATA31A3Q5VYP0 1347 aa15.86■□□□□ 0.13
USP41-202ENST00000454608 NAIPQ13075 1403 aa15.85■□□□□ 0.13
USP41-202ENST00000454608 SEPT12Q8IYM1 358 aa15.85■□□□□ 0.13
USP41-202ENST00000454608 PLCH1Q4KWH8 1693 aa15.85■□□□□ 0.13
USP41-202ENST00000454608 FMN2Q9NZ56 1722 aa15.85■□□□□ 0.13
USP41-202ENST00000454608 CCDC144AA2RUR9 1427 aa15.85■□□□□ 0.13
USP41-202ENST00000454608 ONECUT3O60422 494 aaPredicted RBP15.84■□□□□ 0.13
USP41-202ENST00000454608 VPS72Q15906 364 aa15.84■□□□□ 0.13
USP41-202ENST00000454608 KNDC1Q76NI1 1749 aa15.83■□□□□ 0.13
USP41-202ENST00000454608 TECPR2O15040 1411 aa15.83■□□□□ 0.12
USP41-202ENST00000454608 BAG6P46379 1132 aa15.82■□□□□ 0.12
USP41-202ENST00000454608 KRT27Q7Z3Y8 459 aa15.82■□□□□ 0.12
USP41-202ENST00000454608 HAP1P54257 671 aaPredicted RBP15.81■□□□□ 0.12
USP41-202ENST00000454608 RGPD1P0DJD0 1748 aa15.8■□□□□ 0.12
USP41-202ENST00000454608 HRCP23327 699 aa15.8■□□□□ 0.12
USP41-202ENST00000454608 KRT28Q7Z3Y7 464 aa15.8■□□□□ 0.12
USP41-202ENST00000454608 ABCA3Q99758 1704 aa15.8■□□□□ 0.12
USP41-202ENST00000454608 NUTM2FA1L443 756 aa15.79■□□□□ 0.12
USP41-202ENST00000454608 PSME1Q06323 249 aa15.79■□□□□ 0.12
USP41-202ENST00000454608 RGPD8O14715 1765 aaPredicted RBP15.79■□□□□ 0.12
USP41-202ENST00000454608 TNS3Q68CZ2 1445 aa15.78■□□□□ 0.12
USP41-202ENST00000454608 ABCC11Q96J66 1382 aa15.78■□□□□ 0.12
USP41-202ENST00000454608 PSDA5PKW4 1024 aaPredicted RBP15.78■□□□□ 0.12
USP41-202ENST00000454608 CCDC9Q9Y3X0 531 aaKnown RBP15.78■□□□□ 0.12
USP41-202ENST00000454608 IFT172Q9UG01 1749 aa15.77■□□□□ 0.12
USP41-202ENST00000454608 WAPLQ7Z5K2 1190 aa15.77■□□□□ 0.12
USP41-202ENST00000454608 STK26Q9P289 416 aa15.76■□□□□ 0.11
USP41-202ENST00000454608 RRBP1Q9P2E9 1410 aaKnown RBP15.76■□□□□ 0.11
USP41-202ENST00000454608 SBNO1A3KN83 1393 aa15.75■□□□□ 0.11
USP41-202ENST00000454608 ARHGEF10O15013 1369 aa15.75■□□□□ 0.11
USP41-202ENST00000454608 NRAPQ86VF7 1730 aa15.75■□□□□ 0.11
USP41-202ENST00000454608 ADGRF5Q8IZF2 1346 aa15.73■□□□□ 0.11
USP41-202ENST00000454608 A0A0G2JS52 829 aa15.73■□□□□ 0.11
USP41-202ENST00000454608 MYT1Q01538 1121 aa15.73■□□□□ 0.11
USP41-202ENST00000454608 CABLES1Q8TDN4 633 aa15.73■□□□□ 0.11
USP41-202ENST00000454608 SIRT1Q96EB6 747 aa15.73■□□□□ 0.11
USP41-202ENST00000454608 PHF8Q9UPP1 1060 aa15.73■□□□□ 0.11
USP41-202ENST00000454608 ANKRD30BQ9BXX2 1392 aa15.73■□□□□ 0.11
USP41-202ENST00000454608 PLEKHH1Q9ULM0 1364 aa15.73■□□□□ 0.11
USP41-202ENST00000454608 NRXN1Q9ULB1 1477 aa15.72■□□□□ 0.11
USP41-202ENST00000454608 DISP2A7MBM2 1401 aa15.72■□□□□ 0.11
USP41-202ENST00000454608 SLC4A1APQ9BWU0 796 aaKnown RBP15.72■□□□□ 0.11
USP41-202ENST00000454608 COL14A1Q05707 1796 aaKnown RBP15.71■□□□□ 0.11
USP41-202ENST00000454608 TNS1Q9HBL0 1735 aaKnown RBP15.71■□□□□ 0.1
USP41-202ENST00000454608 YTHDC2Q9H6S0 1430 aaKnown RBP15.7■□□□□ 0.1
USP41-202ENST00000454608 FAM83GA6ND36 823 aa15.7■□□□□ 0.1
USP41-202ENST00000454608 EN1Q05925 392 aaPredicted RBP15.7■□□□□ 0.1
USP41-202ENST00000454608 R3HDM1Q15032 1099 aaKnown RBP15.69■□□□□ 0.1
USP41-202ENST00000454608 FAM98CQ17RN3 349 aaKnown RBP15.69■□□□□ 0.1
USP41-202ENST00000454608 TMEM132EQ6IEE7 984 aa15.69■□□□□ 0.1
USP41-202ENST00000454608 LMOD2Q6P5Q4 547 aa15.69■□□□□ 0.1
USP41-202ENST00000454608 PIK3C2GO75747 1445 aa15.68■□□□□ 0.1
USP41-202ENST00000454608 ADGRB2O60241 1585 aa15.68■□□□□ 0.1
USP41-202ENST00000454608 BTG4Q9NY30 223 aa15.67■□□□□ 0.1
USP41-202ENST00000454608 SPATA31E1Q6ZUB1 1445 aa15.67■□□□□ 0.1
USP41-202ENST00000454608 THSD7AQ9UPZ6 1657 aa15.67■□□□□ 0.1
USP41-202ENST00000454608 TRPM3Q9HCF6 1732 aaPredicted RBP15.66■□□□□ 0.1
USP41-202ENST00000454608 PLEKHG5O94827 1062 aa15.66■□□□□ 0.1
USP41-202ENST00000454608 ALS2Q96Q42 1657 aa15.65■□□□□ 0.1
USP41-202ENST00000454608 RGL3Q3MIN7 710 aa15.65■□□□□ 0.1
USP41-202ENST00000454608 ANKARQ7Z5J8 1434 aa15.65■□□□□ 0.1
USP41-202ENST00000454608 SPATA31A5Q5VU36 1347 aa15.65■□□□□ 0.1
USP41-202ENST00000454608 SPATA31A7Q8IWB4 1347 aa15.65■□□□□ 0.1
USP41-202ENST00000454608 PARD3Q8TEW0 1356 aa15.64■□□□□ 0.09
USP41-202ENST00000454608 DHX57Q6P158 1386 aaKnown RBP15.63■□□□□ 0.09
USP41-202ENST00000454608 YY1P25490 414 aa15.63■□□□□ 0.09
USP41-202ENST00000454608 EZH2Q15910 746 aaKnown RBP15.62■□□□□ 0.09
USP41-202ENST00000454608 CRYBG1Q9Y4K1 1723 aa15.62■□□□□ 0.09
USP41-202ENST00000454608 FAM182BQ5T319 152 aa15.61■□□□□ 0.09
USP41-202ENST00000454608 FAM196AQ6ZSG2 479 aa15.61■□□□□ 0.09
USP41-202ENST00000454608 CAMKK2Q96RR4 588 aa15.61■□□□□ 0.09
USP41-202ENST00000454608 C14orf93Q9H972 538 aaKnown RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms