RNA–Protein interactions for RNA: ENST00000454453.5

NEK6-211, Transcript of NIMA related kinase 6, humanhuman

TSL 3

Gene NEK6, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-211ENST00000454453 ATAD2Q6PL18 1390 aa38.74■■■■□ 3.79
NEK6-211ENST00000454453 TRPC5Q9UL62 973 aaPredicted RBP38.74■■■■□ 3.79
NEK6-211ENST00000454453 MYOM2P54296 1465 aa38.73■■■■□ 3.79
NEK6-211ENST00000454453 RPGRIP1LQ68CZ1 1315 aa38.72■■■■□ 3.79
NEK6-211ENST00000454453 PXDNQ92626 1479 aa38.69■■■■□ 3.78
NEK6-211ENST00000454453 CDC42BPGQ6DT37 1551 aa38.69■■■■□ 3.78
NEK6-211ENST00000454453 EP400Q96L91 3159 aa38.68■■■■□ 3.78
NEK6-211ENST00000454453 BCL9LQ86UU0 1499 aa38.66■■■■□ 3.78
NEK6-211ENST00000454453 ESCO1Q5FWF5 840 aa38.64■■■■□ 3.78
NEK6-211ENST00000454453 NPHP3Q7Z494 1330 aa38.63■■■■□ 3.77
NEK6-211ENST00000454453 MARF1Q9Y4F3 1742 aaKnown RBP38.62■■■■□ 3.77
NEK6-211ENST00000454453 XPCQ01831 940 aaPredicted RBP38.6■■■■□ 3.77
NEK6-211ENST00000454453 SLC4A1APQ9BWU0 796 aaKnown RBP38.6■■■■□ 3.77
NEK6-211ENST00000454453 FOXO3O43524 673 aa38.58■■■■□ 3.77
NEK6-211ENST00000454453 ADGRF5Q8IZF2 1346 aa38.58■■■■□ 3.77
NEK6-211ENST00000454453 FOXD1Q16676 465 aa38.55■■■■□ 3.76
NEK6-211ENST00000454453 TECPR2O15040 1411 aa38.54■■■■□ 3.76
NEK6-211ENST00000454453 WAPLQ7Z5K2 1190 aa38.53■■■■□ 3.76
NEK6-211ENST00000454453 NUTM2FA1L443 756 aa38.51■■■■□ 3.76
NEK6-211ENST00000454453 PLEKHH1Q9ULM0 1364 aa38.5■■■■□ 3.75
NEK6-211ENST00000454453 GJD4Q96KN9 370 aaPredicted RBP38.49■■■■□ 3.75
NEK6-211ENST00000454453 STK26Q9P289 416 aa38.49■■■■□ 3.75
NEK6-211ENST00000454453 LRPPRCP42704 1394 aaKnown RBP38.47■■■■□ 3.75
NEK6-211ENST00000454453 TNKS1BP1Q9C0C2 1729 aaKnown RBP38.47■■■■□ 3.75
NEK6-211ENST00000454453 SPATA31E1Q6ZUB1 1445 aa38.46■■■■□ 3.75
NEK6-211ENST00000454453 IFT172Q9UG01 1749 aa38.46■■■■□ 3.75
NEK6-211ENST00000454453 ZRANB1Q9UGI0 708 aa38.46■■■■□ 3.75
NEK6-211ENST00000454453 GLI3P10071 1580 aa38.45■■■■□ 3.75
NEK6-211ENST00000454453 SLIT2O94813 1529 aa38.44■■■■□ 3.74
NEK6-211ENST00000454453 KNDC1Q76NI1 1749 aa38.44■■■■□ 3.74
NEK6-211ENST00000454453 ABCC11Q96J66 1382 aa38.44■■■■□ 3.74
NEK6-211ENST00000454453 FMN2Q9NZ56 1722 aa38.43■■■■□ 3.74
NEK6-211ENST00000454453 TMEM132EQ6IEE7 984 aa38.43■■■■□ 3.74
NEK6-211ENST00000454453 RGL3Q3MIN7 710 aa38.42■■■■□ 3.74
NEK6-211ENST00000454453 CCDC125Q86Z20 511 aa38.42■■■■□ 3.74
NEK6-211ENST00000454453 RALGAPBQ86X10 1494 aa38.41■■■■□ 3.74
NEK6-211ENST00000454453 SPATA31A3Q5VYP0 1347 aa38.4■■■■□ 3.74
NEK6-211ENST00000454453 CCDC144AA2RUR9 1427 aa38.39■■■■□ 3.74
NEK6-211ENST00000454453 UNC5CLQ8IV45 518 aa38.38■■■■□ 3.73
NEK6-211ENST00000454453 PIK3C2GO75747 1445 aa38.38■■■■□ 3.73
NEK6-211ENST00000454453 ANKRD30BQ9BXX2 1392 aa38.37■■■■□ 3.73
NEK6-211ENST00000454453 KIF1AQ12756 1690 aa38.36■■■■□ 3.73
NEK6-211ENST00000454453 USP32Q8NFA0 1604 aa38.35■■■■□ 3.73
NEK6-211ENST00000454453 YTHDC2Q9H6S0 1430 aaKnown RBP38.32■■■■□ 3.73
NEK6-211ENST00000454453 BRWD3Q6RI45 1802 aa38.31■■■■□ 3.72
NEK6-211ENST00000454453 KRT28Q7Z3Y7 464 aa38.3■■■■□ 3.72
NEK6-211ENST00000454453 RGPD8O14715 1765 aaPredicted RBP38.29■■■■□ 3.72
NEK6-211ENST00000454453 BLMP54132 1417 aaPredicted RBP38.29■■■■□ 3.72
NEK6-211ENST00000454453 MPHOSPH9Q99550 1183 aa38.25■■■■□ 3.71
NEK6-211ENST00000454453 TNS3Q68CZ2 1445 aa38.24■■■■□ 3.71
NEK6-211ENST00000454453 CABLES1Q8TDN4 633 aa38.24■■■■□ 3.71
NEK6-211ENST00000454453 DEFB132Q7Z7B7 95 aa38.22■■■■□ 3.71
NEK6-211ENST00000454453 SIRT1Q96EB6 747 aa38.22■■■■□ 3.71
NEK6-211ENST00000454453 PLCH1Q4KWH8 1693 aa38.21■■■■□ 3.71
NEK6-211ENST00000454453 PHF8Q9UPP1 1060 aa38.21■■■■□ 3.71
NEK6-211ENST00000454453 ABCA3Q99758 1704 aa38.21■■■■□ 3.71
NEK6-211ENST00000454453 SEPT12Q8IYM1 358 aa38.2■■■■□ 3.71
NEK6-211ENST00000454453 VPS72Q15906 364 aa38.18■■■■□ 3.7
NEK6-211ENST00000454453 C14orf93Q9H972 538 aaKnown RBP38.18■■■■□ 3.7
NEK6-211ENST00000454453 NRXN1Q9ULB1 1477 aa38.16■■■■□ 3.7
NEK6-211ENST00000454453 NWD2Q9ULI1 1742 aa38.16■■■■□ 3.7
NEK6-211ENST00000454453 PLEKHG5O94827 1062 aa38.15■■■■□ 3.7
NEK6-211ENST00000454453 SBNO1A3KN83 1393 aa38.15■■■■□ 3.7
NEK6-211ENST00000454453 ONECUT3O60422 494 aaPredicted RBP38.14■■■■□ 3.7
NEK6-211ENST00000454453 PSME1Q06323 249 aa38.13■■■■□ 3.69
NEK6-211ENST00000454453 CFAP70Q5T0N1 1121 aa38.13■■■■□ 3.69
NEK6-211ENST00000454453 HAP1P54257 671 aaPredicted RBP38.12■■■■□ 3.69
NEK6-211ENST00000454453 SAFB2Q14151 953 aaKnown RBP eCLIP38.08■■■■□ 3.69
NEK6-211ENST00000454453 PRAM1Q96QH2 718 aa38.08■■■■□ 3.69
NEK6-211ENST00000454453 DHX57Q6P158 1386 aaKnown RBP38.07■■■■□ 3.69
NEK6-211ENST00000454453 FAM83GA6ND36 823 aa38.07■■■■□ 3.68
NEK6-211ENST00000454453 LMOD2Q6P5Q4 547 aa38.06■■■■□ 3.68
NEK6-211ENST00000454453 KRT27Q7Z3Y8 459 aa38.06■■■■□ 3.68
NEK6-211ENST00000454453 ARHGEF10O15013 1369 aa38.06■■■■□ 3.68
NEK6-211ENST00000454453 CCDC9Q9Y3X0 531 aaKnown RBP38.05■■■■□ 3.68
NEK6-211ENST00000454453 NRAPQ86VF7 1730 aa38.04■■■■□ 3.68
NEK6-211ENST00000454453 SF3B2Q13435 895 aaKnown RBP38.03■■■■□ 3.68
NEK6-211ENST00000454453 PMFBP1Q8TBY8 1022 aa38.03■■■■□ 3.68
NEK6-211ENST00000454453 TRPM3Q9HCF6 1732 aaPredicted RBP38.02■■■■□ 3.68
NEK6-211ENST00000454453 DLC1Q96QB1 1528 aa38.01■■■■□ 3.67
NEK6-211ENST00000454453 ANKARQ7Z5J8 1434 aa38■■■■□ 3.67
NEK6-211ENST00000454453 ADGRB2O60241 1585 aa38■■■■□ 3.67
NEK6-211ENST00000454453 LRP5O75197 1615 aa37.99■■■■□ 3.67
NEK6-211ENST00000454453 ALS2Q96Q42 1657 aa37.95■■■■□ 3.67
NEK6-211ENST00000454453 ADGRB1O14514 1584 aa37.95■■■■□ 3.67
NEK6-211ENST00000454453 FAM98CQ17RN3 349 aaKnown RBP37.93■■■■□ 3.66
NEK6-211ENST00000454453 BTG4Q9NY30 223 aa37.92■■■■□ 3.66
NEK6-211ENST00000454453 POGKQ9P215 609 aa37.92■■■■□ 3.66
NEK6-211ENST00000454453 PRR36Q9H6K5 1346 aa37.91■■■■□ 3.66
NEK6-211ENST00000454453 HIRIP3Q9BW71 556 aaPredicted RBP37.9■■■■□ 3.66
NEK6-211ENST00000454453 COL14A1Q05707 1796 aaKnown RBP37.9■■■■□ 3.66
NEK6-211ENST00000454453 CRYBG1Q9Y4K1 1723 aa37.88■■■■□ 3.65
NEK6-211ENST00000454453 A0A0G2JS52 829 aa37.88■■■■□ 3.65
NEK6-211ENST00000454453 PSDA5PKW4 1024 aaPredicted RBP37.88■■■■□ 3.65
NEK6-211ENST00000454453 MYT1Q01538 1121 aa37.88■■■■□ 3.65
NEK6-211ENST00000454453 BAG6P46379 1132 aa37.86■■■■□ 3.65
NEK6-211ENST00000454453 TRAK1Q9UPV9 953 aa37.85■■■■□ 3.65
NEK6-211ENST00000454453 ACIN1Q9UKV3 1341 aaKnown RBP37.85■■■■□ 3.65
NEK6-211ENST00000454453 FAM182BQ5T319 152 aa37.84■■■■□ 3.65
NEK6-211ENST00000454453 TULP4Q9NRJ4 1543 aa37.83■■■■□ 3.65
Retrieved 100 of 20,778 RNA–protein pairs in 240 ms