RNA–Protein interactions for RNA: ENST00000454244.4

LMCD1-205, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-205ENST00000454244 LRRC59Q96AG4 307 aaKnown RBP15.76■□□□□ 0.11
LMCD1-205ENST00000454244 DHX57Q6P158 1386 aaKnown RBP15.75■□□□□ 0.11
LMCD1-205ENST00000454244 NUTM2BA6NNL0 878 aaPredicted RBP15.75■□□□□ 0.11
LMCD1-205ENST00000454244 NUTM2EB1AL46 878 aaPredicted RBP15.75■□□□□ 0.11
LMCD1-205ENST00000454244 MEX3CQ5U5Q3 659 aaKnown RBP15.75■□□□□ 0.11
LMCD1-205ENST00000454244 NUTM2AQ8IVF1 878 aaPredicted RBP15.75■□□□□ 0.11
LMCD1-205ENST00000454244 DCAF11Q8TEB1 546 aa15.75■□□□□ 0.11
LMCD1-205ENST00000454244 LRP6O75581 1613 aa15.75■□□□□ 0.11
LMCD1-205ENST00000454244 SIRT1Q96EB6 747 aa15.74■□□□□ 0.11
LMCD1-205ENST00000454244 NUTM2FA1L443 756 aa15.73■□□□□ 0.11
LMCD1-205ENST00000454244 ESCO1Q5FWF5 840 aa15.73■□□□□ 0.11
LMCD1-205ENST00000454244 CDC42BPGQ6DT37 1551 aa15.73■□□□□ 0.11
LMCD1-205ENST00000454244 NHSL1Q5SYE7 1610 aa15.72■□□□□ 0.11
LMCD1-205ENST00000454244 SOS2Q07890 1332 aaPredicted RBP15.71■□□□□ 0.11
LMCD1-205ENST00000454244 SHPRHQ149N8 1683 aa15.71■□□□□ 0.11
LMCD1-205ENST00000454244 STAC3Q96MF2 364 aa15.71■□□□□ 0.11
LMCD1-205ENST00000454244 PRAM1Q96QH2 718 aa15.71■□□□□ 0.11
LMCD1-205ENST00000454244 PNPLA6Q8IY17 1366 aa15.71■□□□□ 0.11
LMCD1-205ENST00000454244 KNDC1Q76NI1 1749 aa15.71■□□□□ 0.1
LMCD1-205ENST00000454244 SAFB2Q14151 953 aaKnown RBP eCLIP15.7■□□□□ 0.1
LMCD1-205ENST00000454244 LAMC1P11047 1609 aa15.69■□□□□ 0.1
LMCD1-205ENST00000454244 POGKQ9P215 609 aa15.69■□□□□ 0.1
LMCD1-205ENST00000454244 NPHP3Q7Z494 1330 aa15.68■□□□□ 0.1
LMCD1-205ENST00000454244 FOXO3O43524 673 aa15.68■□□□□ 0.1
LMCD1-205ENST00000454244 TRAK1Q9UPV9 953 aa15.68■□□□□ 0.1
LMCD1-205ENST00000454244 ADGRB1O14514 1584 aa15.67■□□□□ 0.1
LMCD1-205ENST00000454244 XPCQ01831 940 aaPredicted RBP15.67■□□□□ 0.1
LMCD1-205ENST00000454244 ZNF772Q68DY9 489 aaPredicted RBP15.66■□□□□ 0.1
LMCD1-205ENST00000454244 DLC1Q96QB1 1528 aa15.66■□□□□ 0.1
LMCD1-205ENST00000454244 ADAMTS2O95450 1211 aa15.64■□□□□ 0.09
LMCD1-205ENST00000454244 C8orf37Q96NL8 207 aa15.64■□□□□ 0.09
LMCD1-205ENST00000454244 AFF2P51816 1311 aa15.64■□□□□ 0.09
LMCD1-205ENST00000454244 HIRIP3Q9BW71 556 aaPredicted RBP15.62■□□□□ 0.09
LMCD1-205ENST00000454244 PHF8Q9UPP1 1060 aa15.62■□□□□ 0.09
LMCD1-205ENST00000454244 PXDNQ92626 1479 aa15.62■□□□□ 0.09
LMCD1-205ENST00000454244 FMN2Q9NZ56 1722 aa15.62■□□□□ 0.09
LMCD1-205ENST00000454244 MINK1Q8N4C8 1332 aaPredicted RBP15.62■□□□□ 0.09
LMCD1-205ENST00000454244 KRT28Q7Z3Y7 464 aa15.6■□□□□ 0.09
LMCD1-205ENST00000454244 NGLY1Q96IV0 654 aa15.6■□□□□ 0.09
LMCD1-205ENST00000454244 RXRBP28702 533 aa15.58■□□□□ 0.08
LMCD1-205ENST00000454244 SIN3AQ96ST3 1273 aa15.58■□□□□ 0.08
LMCD1-205ENST00000454244 ANKARQ7Z5J8 1434 aa15.58■□□□□ 0.08
LMCD1-205ENST00000454244 WASLO00401 505 aaPredicted RBP15.57■□□□□ 0.08
LMCD1-205ENST00000454244 NBPF1Q3BBV0 1214 aa15.57■□□□□ 0.08
LMCD1-205ENST00000454244 PMFBP1Q8TBY8 1022 aa15.57■□□□□ 0.08
LMCD1-205ENST00000454244 SPATA31A3Q5VYP0 1347 aa15.57■□□□□ 0.08
LMCD1-205ENST00000454244 PSME1Q06323 249 aa15.56■□□□□ 0.08
LMCD1-205ENST00000454244 L3MBTL2Q969R5 705 aa15.56■□□□□ 0.08
LMCD1-205ENST00000454244 QTRT2Q9H974 415 aaKnown RBP15.56■□□□□ 0.08
LMCD1-205ENST00000454244 PRR36Q9H6K5 1346 aa15.56■□□□□ 0.08
LMCD1-205ENST00000454244 ADGRB2O60241 1585 aa15.56■□□□□ 0.08
LMCD1-205ENST00000454244 KIF1AQ12756 1690 aa15.56■□□□□ 0.08
LMCD1-205ENST00000454244 EIF3AQ14152 1382 aaKnown RBP15.55■□□□□ 0.08
LMCD1-205ENST00000454244 NEUROD1Q13562 356 aa15.55■□□□□ 0.08
LMCD1-205ENST00000454244 COL22A1Q8NFW1 1626 aaPredicted RBP15.54■□□□□ 0.08
LMCD1-205ENST00000454244 USP21Q9UK80 565 aa15.54■□□□□ 0.08
LMCD1-205ENST00000454244 FNBP4Q8N3X1 1017 aaPredicted RBP15.53■□□□□ 0.08
LMCD1-205ENST00000454244 TNS3Q68CZ2 1445 aa15.52■□□□□ 0.08
LMCD1-205ENST00000454244 SBNO1A3KN83 1393 aa15.52■□□□□ 0.08
LMCD1-205ENST00000454244 PLEKHG5O94827 1062 aa15.52■□□□□ 0.08
LMCD1-205ENST00000454244 RBM6P78332 1123 aaKnown RBP15.52■□□□□ 0.08
LMCD1-205ENST00000454244 LMOD2Q6P5Q4 547 aa15.52■□□□□ 0.08
LMCD1-205ENST00000454244 USP32Q8NFA0 1604 aa15.52■□□□□ 0.08
LMCD1-205ENST00000454244 TULP4Q9NRJ4 1543 aa15.52■□□□□ 0.07
LMCD1-205ENST00000454244 RGPD8O14715 1765 aaPredicted RBP15.51■□□□□ 0.07
LMCD1-205ENST00000454244 HAP1P54257 671 aaPredicted RBP15.5■□□□□ 0.07
LMCD1-205ENST00000454244 CABLES1Q8TDN4 633 aa15.5■□□□□ 0.07
LMCD1-205ENST00000454244 NUDT16Q96DE0 195 aaKnown RBP15.5■□□□□ 0.07
LMCD1-205ENST00000454244 CDK19Q9BWU1 502 aa15.5■□□□□ 0.07
LMCD1-205ENST00000454244 TRPC5Q9UL62 973 aaPredicted RBP15.5■□□□□ 0.07
LMCD1-205ENST00000454244 ARHGEF28Q8N1W1 1705 aaKnown RBP15.5■□□□□ 0.07
LMCD1-205ENST00000454244 CDK12Q9NYV4 1490 aaPredicted RBP15.5■□□□□ 0.07
LMCD1-205ENST00000454244 GPRASP1Q5JY77 1395 aa15.49■□□□□ 0.07
LMCD1-205ENST00000454244 KIAA1210Q9ULL0 1709 aa15.49■□□□□ 0.07
LMCD1-205ENST00000454244 TRIM26Q12899 539 aaPredicted RBP15.49■□□□□ 0.07
LMCD1-205ENST00000454244 NGDNQ8NEJ9 315 aaKnown RBP15.49■□□□□ 0.07
LMCD1-205ENST00000454244 ARHGEF10O15013 1369 aa15.49■□□□□ 0.07
LMCD1-205ENST00000454244 CENPJQ9HC77 1338 aaPredicted RBP15.47■□□□□ 0.07
LMCD1-205ENST00000454244 RGS12O14924 1447 aa15.47■□□□□ 0.07
LMCD1-205ENST00000454244 ATRNO75882 1429 aa15.47■□□□□ 0.07
LMCD1-205ENST00000454244 ATP7BP35670 1465 aa15.46■□□□□ 0.07
LMCD1-205ENST00000454244 BCL9LQ86UU0 1499 aa15.46■□□□□ 0.07
LMCD1-205ENST00000454244 PAK3O75914 559 aaPredicted RBP15.44■□□□□ 0.06
LMCD1-205ENST00000454244 UPF1Q92900 1129 aaKnown RBP eCLIP15.44■□□□□ 0.06
LMCD1-205ENST00000454244 CCDC61Q9Y6R9 512 aa15.44■□□□□ 0.06
LMCD1-205ENST00000454244 SRPK2P78362 688 aaKnown RBP15.43■□□□□ 0.06
LMCD1-205ENST00000454244 UNC5CLQ8IV45 518 aa15.43■□□□□ 0.06
LMCD1-205ENST00000454244 SLIT2O94813 1529 aa15.43■□□□□ 0.06
LMCD1-205ENST00000454244 ROCK2O75116 1388 aaKnown RBP15.42■□□□□ 0.06
LMCD1-205ENST00000454244 NBPF8Q3BBV2 869 aa15.42■□□□□ 0.06
LMCD1-205ENST00000454244 GJD4Q96KN9 370 aaPredicted RBP15.42■□□□□ 0.06
LMCD1-205ENST00000454244 CABP2Q9NPB3 220 aa15.42■□□□□ 0.06
LMCD1-205ENST00000454244 ACEP12821 1306 aa15.42■□□□□ 0.06
LMCD1-205ENST00000454244 PLEKHG3A1L390 1219 aa15.41■□□□□ 0.06
LMCD1-205ENST00000454244 TRPM3Q9HCF6 1732 aaPredicted RBP15.4■□□□□ 0.06
LMCD1-205ENST00000454244 FAM83GA6ND36 823 aa15.4■□□□□ 0.06
LMCD1-205ENST00000454244 MARF1Q9Y4F3 1742 aaKnown RBP15.4■□□□□ 0.06
LMCD1-205ENST00000454244 POLR3AO14802 1390 aaPredicted RBP15.39■□□□□ 0.05
LMCD1-205ENST00000454244 TONSLQ96HA7 1378 aa15.39■□□□□ 0.05
LMCD1-205ENST00000454244 TRPM1Q7Z4N2 1603 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms