RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 ADGRF5Q8IZF2 1346 aa35.42■■■■□ 3.26
LYSMD2-202ENST00000454181 USP21Q9UK80 565 aa35.41■■■■□ 3.26
LYSMD2-202ENST00000454181 LAMC1P11047 1609 aa35.41■■■■□ 3.26
LYSMD2-202ENST00000454181 NPHP3Q7Z494 1330 aa35.4■■■■□ 3.26
LYSMD2-202ENST00000454181 MPHOSPH9Q99550 1183 aa35.39■■■■□ 3.26
LYSMD2-202ENST00000454181 ANKRD30BQ9BXX2 1392 aa35.38■■■■□ 3.26
LYSMD2-202ENST00000454181 RGS12O14924 1447 aa35.38■■■■□ 3.25
LYSMD2-202ENST00000454181 TRPC5Q9UL62 973 aaPredicted RBP35.36■■■■□ 3.25
LYSMD2-202ENST00000454181 WAPLQ7Z5K2 1190 aa35.34■■■■□ 3.25
LYSMD2-202ENST00000454181 FOXO3O43524 673 aa35.33■■■■□ 3.25
LYSMD2-202ENST00000454181 LRPPRCP42704 1394 aaKnown RBP35.33■■■■□ 3.25
LYSMD2-202ENST00000454181 NUTM2FA1L443 756 aa35.32■■■■□ 3.24
LYSMD2-202ENST00000454181 CDC42BPGQ6DT37 1551 aa35.32■■■■□ 3.24
LYSMD2-202ENST00000454181 TMEM132EQ6IEE7 984 aa35.31■■■■□ 3.24
LYSMD2-202ENST00000454181 FNBP4Q8N3X1 1017 aaPredicted RBP35.31■■■■□ 3.24
LYSMD2-202ENST00000454181 SPATA31E1Q6ZUB1 1445 aa35.31■■■■□ 3.24
LYSMD2-202ENST00000454181 XPCQ01831 940 aaPredicted RBP35.3■■■■□ 3.24
LYSMD2-202ENST00000454181 ABCC11Q96J66 1382 aa35.28■■■■□ 3.24
LYSMD2-202ENST00000454181 TECPR2O15040 1411 aa35.27■■■■□ 3.24
LYSMD2-202ENST00000454181 ACIN1Q9UKV3 1341 aaKnown RBP35.26■■■■□ 3.23
LYSMD2-202ENST00000454181 ATAD2Q6PL18 1390 aa35.24■■■■□ 3.23
LYSMD2-202ENST00000454181 COL22A1Q8NFW1 1626 aaPredicted RBP35.23■■■■□ 3.23
LYSMD2-202ENST00000454181 PXDNQ92626 1479 aa35.22■■■■□ 3.23
LYSMD2-202ENST00000454181 MYOM2P54296 1465 aa35.21■■■■□ 3.23
LYSMD2-202ENST00000454181 PLEKHH1Q9ULM0 1364 aa35.2■■■■□ 3.23
LYSMD2-202ENST00000454181 PIK3C2GO75747 1445 aa35.2■■■■□ 3.23
LYSMD2-202ENST00000454181 YTHDC2Q9H6S0 1430 aaKnown RBP35.19■■■■□ 3.22
LYSMD2-202ENST00000454181 ATRNO75882 1429 aa35.18■■■■□ 3.22
LYSMD2-202ENST00000454181 IFT172Q9UG01 1749 aa35.16■■■■□ 3.22
LYSMD2-202ENST00000454181 SIRT1Q96EB6 747 aa35.16■■■■□ 3.22
LYSMD2-202ENST00000454181 C14orf93Q9H972 538 aaKnown RBP35.15■■■■□ 3.22
LYSMD2-202ENST00000454181 DHX57Q6P158 1386 aaKnown RBP35.13■■■■□ 3.21
LYSMD2-202ENST00000454181 KNDC1Q76NI1 1749 aa35.12■■■■□ 3.21
LYSMD2-202ENST00000454181 KRT28Q7Z3Y7 464 aa35.12■■■■□ 3.21
LYSMD2-202ENST00000454181 BCL9LQ86UU0 1499 aa35.1■■■■□ 3.21
LYSMD2-202ENST00000454181 SPATA31A3Q5VYP0 1347 aa35.1■■■■□ 3.21
LYSMD2-202ENST00000454181 HAP1P54257 671 aaPredicted RBP35.09■■■■□ 3.21
LYSMD2-202ENST00000454181 CFAP70Q5T0N1 1121 aa35.09■■■■□ 3.21
LYSMD2-202ENST00000454181 GJD4Q96KN9 370 aaPredicted RBP35.09■■■■□ 3.21
LYSMD2-202ENST00000454181 PSME1Q06323 249 aa35.08■■■■□ 3.21
LYSMD2-202ENST00000454181 PHF8Q9UPP1 1060 aa35.07■■■■□ 3.2
LYSMD2-202ENST00000454181 FMN2Q9NZ56 1722 aa35.06■■■■□ 3.2
LYSMD2-202ENST00000454181 KIF1AQ12756 1690 aa35.05■■■■□ 3.2
LYSMD2-202ENST00000454181 SAFB2Q14151 953 aaKnown RBP eCLIP35.04■■■■□ 3.2
LYSMD2-202ENST00000454181 UNC5CLQ8IV45 518 aa35.04■■■■□ 3.2
LYSMD2-202ENST00000454181 POGKQ9P215 609 aa35.04■■■■□ 3.2
LYSMD2-202ENST00000454181 PRAM1Q96QH2 718 aa35.03■■■■□ 3.2
LYSMD2-202ENST00000454181 MARF1Q9Y4F3 1742 aaKnown RBP35.03■■■■□ 3.2
LYSMD2-202ENST00000454181 CCDC125Q86Z20 511 aa35.02■■■■□ 3.2
LYSMD2-202ENST00000454181 LMOD2Q6P5Q4 547 aa35■■■■□ 3.19
LYSMD2-202ENST00000454181 PLEKHG5O94827 1062 aa34.99■■■■□ 3.19
LYSMD2-202ENST00000454181 NRXN1Q9ULB1 1477 aa34.98■■■■□ 3.19
LYSMD2-202ENST00000454181 ZRANB1Q9UGI0 708 aa34.96■■■■□ 3.19
LYSMD2-202ENST00000454181 TNS3Q68CZ2 1445 aa34.96■■■■□ 3.19
LYSMD2-202ENST00000454181 CABLES1Q8TDN4 633 aa34.94■■■■□ 3.18
LYSMD2-202ENST00000454181 SLIT2O94813 1529 aa34.94■■■■□ 3.18
LYSMD2-202ENST00000454181 SBNO1A3KN83 1393 aa34.92■■■■□ 3.18
LYSMD2-202ENST00000454181 RAB3GAP2Q9H2M9 1393 aa34.92■■■■□ 3.18
LYSMD2-202ENST00000454181 RALGAPBQ86X10 1494 aa34.91■■■■□ 3.18
LYSMD2-202ENST00000454181 CCDC9Q9Y3X0 531 aaKnown RBP34.91■■■■□ 3.18
LYSMD2-202ENST00000454181 ARHGEF10O15013 1369 aa34.9■■■■□ 3.18
LYSMD2-202ENST00000454181 PMFBP1Q8TBY8 1022 aa34.9■■■■□ 3.18
LYSMD2-202ENST00000454181 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.89■■■■□ 3.18
LYSMD2-202ENST00000454181 USP32Q8NFA0 1604 aa34.89■■■■□ 3.18
LYSMD2-202ENST00000454181 TRAK1Q9UPV9 953 aa34.88■■■■□ 3.17
LYSMD2-202ENST00000454181 RGPD8O14715 1765 aaPredicted RBP34.87■■■■□ 3.17
LYSMD2-202ENST00000454181 KDM2AQ9Y2K7 1162 aa34.87■■■■□ 3.17
LYSMD2-202ENST00000454181 DLC1Q96QB1 1528 aa34.86■■■■□ 3.17
LYSMD2-202ENST00000454181 ANKARQ7Z5J8 1434 aa34.86■■■■□ 3.17
LYSMD2-202ENST00000454181 VPS72Q15906 364 aa34.85■■■■□ 3.17
LYSMD2-202ENST00000454181 HIRIP3Q9BW71 556 aaPredicted RBP34.84■■■■□ 3.17
LYSMD2-202ENST00000454181 SEPT12Q8IYM1 358 aa34.83■■■■□ 3.17
LYSMD2-202ENST00000454181 DCAF11Q8TEB1 546 aa34.83■■■■□ 3.17
LYSMD2-202ENST00000454181 GLI3P10071 1580 aa34.83■■■■□ 3.17
LYSMD2-202ENST00000454181 EIF3AQ14152 1382 aaKnown RBP34.82■■■■□ 3.16
LYSMD2-202ENST00000454181 MINK1Q8N4C8 1332 aaPredicted RBP34.81■■■■□ 3.16
LYSMD2-202ENST00000454181 SF3B2Q13435 895 aaKnown RBP34.81■■■■□ 3.16
LYSMD2-202ENST00000454181 GPRASP1Q5JY77 1395 aa34.81■■■■□ 3.16
LYSMD2-202ENST00000454181 BLMP54132 1417 aaPredicted RBP34.79■■■■□ 3.16
LYSMD2-202ENST00000454181 STAC3Q96MF2 364 aa34.78■■■■□ 3.16
LYSMD2-202ENST00000454181 EP400Q96L91 3159 aa34.77■■■■□ 3.16
LYSMD2-202ENST00000454181 A0A0G2JS52 829 aa34.76■■■■□ 3.16
LYSMD2-202ENST00000454181 FAM83GA6ND36 823 aa34.76■■■■□ 3.16
LYSMD2-202ENST00000454181 MYT1Q01538 1121 aa34.76■■■■□ 3.16
LYSMD2-202ENST00000454181 ADGRB1O14514 1584 aa34.75■■■■□ 3.15
LYSMD2-202ENST00000454181 ADGRB2O60241 1585 aa34.74■■■■□ 3.15
LYSMD2-202ENST00000454181 WASLO00401 505 aaPredicted RBP34.74■■■■□ 3.15
LYSMD2-202ENST00000454181 NGDNQ8NEJ9 315 aaKnown RBP34.74■■■■□ 3.15
LYSMD2-202ENST00000454181 ONECUT3O60422 494 aaPredicted RBP34.72■■■■□ 3.15
LYSMD2-202ENST00000454181 KRT27Q7Z3Y8 459 aa34.72■■■■□ 3.15
LYSMD2-202ENST00000454181 NWD2Q9ULI1 1742 aa34.71■■■■□ 3.15
LYSMD2-202ENST00000454181 PAK3O75914 559 aaPredicted RBP34.7■■■■□ 3.15
LYSMD2-202ENST00000454181 BTG4Q9NY30 223 aa34.7■■■■□ 3.15
LYSMD2-202ENST00000454181 PLCH1Q4KWH8 1693 aa34.7■■■■□ 3.14
LYSMD2-202ENST00000454181 PRR36Q9H6K5 1346 aa34.69■■■■□ 3.14
LYSMD2-202ENST00000454181 DEFB132Q7Z7B7 95 aa34.68■■■■□ 3.14
LYSMD2-202ENST00000454181 TULP4Q9NRJ4 1543 aa34.66■■■■□ 3.14
LYSMD2-202ENST00000454181 ABCA3Q99758 1704 aa34.66■■■■□ 3.14
LYSMD2-202ENST00000454181 SRCAPQ6ZRS2 3230 aa34.65■■■■□ 3.14
LYSMD2-202ENST00000454181 BRWD3Q6RI45 1802 aa34.65■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms