RNA–Protein interactions for RNA: ENST00000454001.1

RPSAP54-201, Transcript of ribosomal protein SA pseudogene 54, humanhuman

BASIC

Gene RPSAP54, Length 886 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSAP54-201ENST00000454001 CCDC144AA2RUR9 1427 aa12.22□□□□□ -0.45
RPSAP54-201ENST00000454001 RGL3Q3MIN7 710 aa12.22□□□□□ -0.45
RPSAP54-201ENST00000454001 UPF1Q92900 1129 aaKnown RBP eCLIP12.22□□□□□ -0.45
RPSAP54-201ENST00000454001 STK26Q9P289 416 aa12.21□□□□□ -0.45
RPSAP54-201ENST00000454001 RPGRIP1LQ68CZ1 1315 aa12.2□□□□□ -0.46
RPSAP54-201ENST00000454001 ADGRF5Q8IZF2 1346 aa12.2□□□□□ -0.46
RPSAP54-201ENST00000454001 NUTM2FA1L443 756 aa12.2□□□□□ -0.46
RPSAP54-201ENST00000454001 XPCQ01831 940 aaPredicted RBP12.2□□□□□ -0.46
RPSAP54-201ENST00000454001 CDK12Q9NYV4 1490 aaPredicted RBP12.2□□□□□ -0.46
RPSAP54-201ENST00000454001 KNDC1Q76NI1 1749 aa12.2□□□□□ -0.46
RPSAP54-201ENST00000454001 PRAG1Q86YV5 1406 aa12.2□□□□□ -0.46
RPSAP54-201ENST00000454001 COL22A1Q8NFW1 1626 aaPredicted RBP12.19□□□□□ -0.46
RPSAP54-201ENST00000454001 EP400Q96L91 3159 aa12.19□□□□□ -0.46
RPSAP54-201ENST00000454001 NGLY1Q96IV0 654 aa12.19□□□□□ -0.46
RPSAP54-201ENST00000454001 QTRT2Q9H974 415 aaKnown RBP12.19□□□□□ -0.46
RPSAP54-201ENST00000454001 MARF1Q9Y4F3 1742 aaKnown RBP12.18□□□□□ -0.46
RPSAP54-201ENST00000454001 ESCO1Q5FWF5 840 aa12.18□□□□□ -0.46
RPSAP54-201ENST00000454001 SPATA31E1Q6ZUB1 1445 aa12.18□□□□□ -0.46
RPSAP54-201ENST00000454001 PLEKHH1Q9ULM0 1364 aa12.18□□□□□ -0.46
RPSAP54-201ENST00000454001 FMN2Q9NZ56 1722 aa12.17□□□□□ -0.46
RPSAP54-201ENST00000454001 SOS2Q07890 1332 aaPredicted RBP12.17□□□□□ -0.46
RPSAP54-201ENST00000454001 PXDNQ92626 1479 aa12.17□□□□□ -0.46
RPSAP54-201ENST00000454001 TMEM132EQ6IEE7 984 aa12.17□□□□□ -0.46
RPSAP54-201ENST00000454001 WAPLQ7Z5K2 1190 aa12.17□□□□□ -0.46
RPSAP54-201ENST00000454001 SRCAPQ6ZRS2 3230 aa12.16□□□□□ -0.46
RPSAP54-201ENST00000454001 RGPD8O14715 1765 aaPredicted RBP12.16□□□□□ -0.46
RPSAP54-201ENST00000454001 ZNF316A6NFI3 1004 aaPredicted RBP12.16□□□□□ -0.46
RPSAP54-201ENST00000454001 RBM6P78332 1123 aaKnown RBP12.16□□□□□ -0.46
RPSAP54-201ENST00000454001 PIK3C2GO75747 1445 aa12.15□□□□□ -0.46
RPSAP54-201ENST00000454001 MPHOSPH9Q99550 1183 aa12.15□□□□□ -0.46
RPSAP54-201ENST00000454001 USP21Q9UK80 565 aa12.15□□□□□ -0.46
RPSAP54-201ENST00000454001 MYOM2P54296 1465 aa12.14□□□□□ -0.47
RPSAP54-201ENST00000454001 NPHP3Q7Z494 1330 aa12.14□□□□□ -0.47
RPSAP54-201ENST00000454001 TECPR2O15040 1411 aa12.14□□□□□ -0.47
RPSAP54-201ENST00000454001 KIF1AQ12756 1690 aa12.14□□□□□ -0.47
RPSAP54-201ENST00000454001 FOXO3O43524 673 aa12.14□□□□□ -0.47
RPSAP54-201ENST00000454001 PLEKHG5O94827 1062 aa12.14□□□□□ -0.47
RPSAP54-201ENST00000454001 LRPPRCP42704 1394 aaKnown RBP12.14□□□□□ -0.47
RPSAP54-201ENST00000454001 ANKRD30BQ9BXX2 1392 aa12.14□□□□□ -0.47
RPSAP54-201ENST00000454001 YTHDC2Q9H6S0 1430 aaKnown RBP12.13□□□□□ -0.47
RPSAP54-201ENST00000454001 ATRNO75882 1429 aa12.11□□□□□ -0.47
RPSAP54-201ENST00000454001 SAFB2Q14151 953 aaKnown RBP eCLIP12.11□□□□□ -0.47
RPSAP54-201ENST00000454001 TRPC5Q9UL62 973 aaPredicted RBP12.11□□□□□ -0.47
RPSAP54-201ENST00000454001 ATAD2Q6PL18 1390 aa12.1□□□□□ -0.47
RPSAP54-201ENST00000454001 ABCA3Q99758 1704 aa12.1□□□□□ -0.47
RPSAP54-201ENST00000454001 USP32Q8NFA0 1604 aa12.1□□□□□ -0.47
RPSAP54-201ENST00000454001 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.09□□□□□ -0.47
RPSAP54-201ENST00000454001 ABCC11Q96J66 1382 aa12.09□□□□□ -0.47
RPSAP54-201ENST00000454001 DIEXFQ68CQ4 756 aaKnown RBP12.09□□□□□ -0.47
RPSAP54-201ENST00000454001 BCL9LQ86UU0 1499 aa12.08□□□□□ -0.47
RPSAP54-201ENST00000454001 PLCH1Q4KWH8 1693 aa12.08□□□□□ -0.48
RPSAP54-201ENST00000454001 CFAP70Q5T0N1 1121 aa12.08□□□□□ -0.48
RPSAP54-201ENST00000454001 FNBP4Q8N3X1 1017 aaPredicted RBP12.08□□□□□ -0.48
RPSAP54-201ENST00000454001 GLI3P10071 1580 aa12.07□□□□□ -0.48
RPSAP54-201ENST00000454001 NRXN1Q9ULB1 1477 aa12.07□□□□□ -0.48
RPSAP54-201ENST00000454001 BRWD3Q6RI45 1802 aa12.07□□□□□ -0.48
RPSAP54-201ENST00000454001 HAP1P54257 671 aaPredicted RBP12.06□□□□□ -0.48
RPSAP54-201ENST00000454001 LMOD2Q6P5Q4 547 aa12.06□□□□□ -0.48
RPSAP54-201ENST00000454001 PRAM1Q96QH2 718 aa12.06□□□□□ -0.48
RPSAP54-201ENST00000454001 TNS3Q68CZ2 1445 aa12.05□□□□□ -0.48
RPSAP54-201ENST00000454001 KRT28Q7Z3Y7 464 aa12.05□□□□□ -0.48
RPSAP54-201ENST00000454001 CABLES1Q8TDN4 633 aa12.05□□□□□ -0.48
RPSAP54-201ENST00000454001 C14orf93Q9H972 538 aaKnown RBP12.05□□□□□ -0.48
RPSAP54-201ENST00000454001 RALGAPBQ86X10 1494 aa12.05□□□□□ -0.48
RPSAP54-201ENST00000454001 SPATA31A3Q5VYP0 1347 aa12.05□□□□□ -0.48
RPSAP54-201ENST00000454001 PHF8Q9UPP1 1060 aa12.04□□□□□ -0.48
RPSAP54-201ENST00000454001 SLIT2O94813 1529 aa12.03□□□□□ -0.48
RPSAP54-201ENST00000454001 HIRIP3Q9BW71 556 aaPredicted RBP12.03□□□□□ -0.48
RPSAP54-201ENST00000454001 POGKQ9P215 609 aa12.03□□□□□ -0.48
RPSAP54-201ENST00000454001 TIMELESSQ9UNS1 1208 aa12.03□□□□□ -0.48
RPSAP54-201ENST00000454001 ADGRB1O14514 1584 aa12.03□□□□□ -0.48
RPSAP54-201ENST00000454001 ADGRB2O60241 1585 aa12.03□□□□□ -0.48
RPSAP54-201ENST00000454001 PMFBP1Q8TBY8 1022 aa12.02□□□□□ -0.49
RPSAP54-201ENST00000454001 GJD4Q96KN9 370 aaPredicted RBP12.02□□□□□ -0.49
RPSAP54-201ENST00000454001 TRPM3Q9HCF6 1732 aaPredicted RBP12.02□□□□□ -0.49
RPSAP54-201ENST00000454001 NWD2Q9ULI1 1742 aa12.02□□□□□ -0.49
RPSAP54-201ENST00000454001 DLC1Q96QB1 1528 aa12.01□□□□□ -0.49
RPSAP54-201ENST00000454001 UNC5CLQ8IV45 518 aa12.01□□□□□ -0.49
RPSAP54-201ENST00000454001 SIN3AQ96ST3 1273 aa12.01□□□□□ -0.49
RPSAP54-201ENST00000454001 TRAK1Q9UPV9 953 aa12.01□□□□□ -0.49
RPSAP54-201ENST00000454001 KDM2AQ9Y2K7 1162 aa12.01□□□□□ -0.49
RPSAP54-201ENST00000454001 CCDC9Q9Y3X0 531 aaKnown RBP12.01□□□□□ -0.49
RPSAP54-201ENST00000454001 MINK1Q8N4C8 1332 aaPredicted RBP12.01□□□□□ -0.49
RPSAP54-201ENST00000454001 PSME1Q06323 249 aa12□□□□□ -0.49
RPSAP54-201ENST00000454001 NRAPQ86VF7 1730 aa12□□□□□ -0.49
RPSAP54-201ENST00000454001 ARHGEF28Q8N1W1 1705 aaKnown RBP12□□□□□ -0.49
RPSAP54-201ENST00000454001 ALS2Q96Q42 1657 aa11.99□□□□□ -0.49
RPSAP54-201ENST00000454001 ANKARQ7Z5J8 1434 aa11.98□□□□□ -0.49
RPSAP54-201ENST00000454001 SBNO1A3KN83 1393 aa11.98□□□□□ -0.49
RPSAP54-201ENST00000454001 ARHGEF10O15013 1369 aa11.98□□□□□ -0.49
RPSAP54-201ENST00000454001 ACIN1Q9UKV3 1341 aaKnown RBP11.98□□□□□ -0.49
RPSAP54-201ENST00000454001 A0A0G2JS52 829 aa11.98□□□□□ -0.49
RPSAP54-201ENST00000454001 MYT1Q01538 1121 aa11.98□□□□□ -0.49
RPSAP54-201ENST00000454001 SIRT1Q96EB6 747 aa11.98□□□□□ -0.49
RPSAP54-201ENST00000454001 ITSN1Q15811 1721 aa11.97□□□□□ -0.49
RPSAP54-201ENST00000454001 TULP4Q9NRJ4 1543 aa11.97□□□□□ -0.49
RPSAP54-201ENST00000454001 PRR36Q9H6K5 1346 aa11.97□□□□□ -0.49
RPSAP54-201ENST00000454001 NEUROD1Q13562 356 aa11.97□□□□□ -0.49
RPSAP54-201ENST00000454001 DCAF11Q8TEB1 546 aa11.97□□□□□ -0.49
RPSAP54-201ENST00000454001 CRYBG1Q9Y4K1 1723 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms