RNA–Protein interactions for RNA: ENST00000453863.5

RNF220-206, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-206ENST00000453863 C1orf167Q5SNV9 1468 aa13.08□□□□□ -0.32
RNF220-206ENST00000453863 EIF3AQ14152 1382 aaKnown RBP13.07□□□□□ -0.32
RNF220-206ENST00000453863 DISP3Q9P2K9 1392 aa13.07□□□□□ -0.32
RNF220-206ENST00000453863 POGKQ9P215 609 aa13.07□□□□□ -0.32
RNF220-206ENST00000453863 KIF1AQ12756 1690 aa13.07□□□□□ -0.32
RNF220-206ENST00000453863 ARHGEF28Q8N1W1 1705 aaKnown RBP13.07□□□□□ -0.32
RNF220-206ENST00000453863 JCADQ9P266 1359 aa13.07□□□□□ -0.32
RNF220-206ENST00000453863 BRINP3Q76B58 766 aa13.06□□□□□ -0.32
RNF220-206ENST00000453863 PHF23Q9BUL5 403 aaPredicted RBP13.06□□□□□ -0.32
RNF220-206ENST00000453863 TONSLQ96HA7 1378 aa13.06□□□□□ -0.32
RNF220-206ENST00000453863 SHPRHQ149N8 1683 aa13.05□□□□□ -0.32
RNF220-206ENST00000453863 NEUROD1Q13562 356 aa13.05□□□□□ -0.32
RNF220-206ENST00000453863 WAPLQ7Z5K2 1190 aa13.04□□□□□ -0.32
RNF220-206ENST00000453863 PRAM1Q96QH2 718 aa13.04□□□□□ -0.32
RNF220-206ENST00000453863 PLEKHH1Q9ULM0 1364 aa13.04□□□□□ -0.32
RNF220-206ENST00000453863 TRPM1Q7Z4N2 1603 aa13.03□□□□□ -0.32
RNF220-206ENST00000453863 L3MBTL2Q969R5 705 aa13.02□□□□□ -0.33
RNF220-206ENST00000453863 TRAK1Q9UPV9 953 aa13.02□□□□□ -0.33
RNF220-206ENST00000453863 ANKARQ7Z5J8 1434 aa13.02□□□□□ -0.33
RNF220-206ENST00000453863 SAFB2Q14151 953 aaKnown RBP eCLIP13.01□□□□□ -0.33
RNF220-206ENST00000453863 SIN3AQ96ST3 1273 aa13.01□□□□□ -0.33
RNF220-206ENST00000453863 SPATA31A6Q5VVP1 1343 aa13.01□□□□□ -0.33
RNF220-206ENST00000453863 NPHP3Q7Z494 1330 aa13.01□□□□□ -0.33
RNF220-206ENST00000453863 ITSN1Q15811 1721 aa13.01□□□□□ -0.33
RNF220-206ENST00000453863 TULP4Q9NRJ4 1543 aa13□□□□□ -0.33
RNF220-206ENST00000453863 ROCK2O75116 1388 aaKnown RBP12.99□□□□□ -0.33
RNF220-206ENST00000453863 CLSPNQ9HAW4 1339 aa12.99□□□□□ -0.33
RNF220-206ENST00000453863 ESCO1Q5FWF5 840 aa12.99□□□□□ -0.33
RNF220-206ENST00000453863 LRRC59Q96AG4 307 aaKnown RBP12.99□□□□□ -0.33
RNF220-206ENST00000453863 PCGF6Q9BYE7 350 aa12.98□□□□□ -0.33
RNF220-206ENST00000453863 QRICH2Q9H0J4 1663 aa12.98□□□□□ -0.33
RNF220-206ENST00000453863 MINK1Q8N4C8 1332 aaPredicted RBP12.97□□□□□ -0.33
RNF220-206ENST00000453863 ORAI2Q96SN7 254 aa12.97□□□□□ -0.33
RNF220-206ENST00000453863 NUTM2FA1L443 756 aa12.96□□□□□ -0.33
RNF220-206ENST00000453863 RALGAPBQ86X10 1494 aa12.96□□□□□ -0.34
RNF220-206ENST00000453863 CENPJQ9HC77 1338 aaPredicted RBP12.95□□□□□ -0.34
RNF220-206ENST00000453863 RGPD8O14715 1765 aaPredicted RBP12.95□□□□□ -0.34
RNF220-206ENST00000453863 MEX3CQ5U5Q3 659 aaKnown RBP12.95□□□□□ -0.34
RNF220-206ENST00000453863 PXDNQ92626 1479 aa12.95□□□□□ -0.34
RNF220-206ENST00000453863 USP32Q8NFA0 1604 aa12.95□□□□□ -0.34
RNF220-206ENST00000453863 PNPLA6Q8IY17 1366 aa12.94□□□□□ -0.34
RNF220-206ENST00000453863 SOS2Q07890 1332 aaPredicted RBP12.94□□□□□ -0.34
RNF220-206ENST00000453863 HIRIP3Q9BW71 556 aaPredicted RBP12.94□□□□□ -0.34
RNF220-206ENST00000453863 PHF8Q9UPP1 1060 aa12.94□□□□□ -0.34
RNF220-206ENST00000453863 COL22A1Q8NFW1 1626 aaPredicted RBP12.94□□□□□ -0.34
RNF220-206ENST00000453863 GPRASP1Q5JY77 1395 aa12.94□□□□□ -0.34
RNF220-206ENST00000453863 WASLO00401 505 aaPredicted RBP12.93□□□□□ -0.34
RNF220-206ENST00000453863 NBPF1Q3BBV0 1214 aa12.93□□□□□ -0.34
RNF220-206ENST00000453863 TOPAZ1Q8N9V7 1692 aa12.93□□□□□ -0.34
RNF220-206ENST00000453863 ATP7BP35670 1465 aa12.92□□□□□ -0.34
RNF220-206ENST00000453863 FOXO3O43524 673 aa12.92□□□□□ -0.34
RNF220-206ENST00000453863 PSME1Q06323 249 aa12.92□□□□□ -0.34
RNF220-206ENST00000453863 LRP6O75581 1613 aa12.91□□□□□ -0.34
RNF220-206ENST00000453863 TNS3Q68CZ2 1445 aa12.91□□□□□ -0.34
RNF220-206ENST00000453863 DDX17Q92841 729 aaKnown RBP12.91□□□□□ -0.34
RNF220-206ENST00000453863 TIMELESSQ9UNS1 1208 aa12.9□□□□□ -0.34
RNF220-206ENST00000453863 ARHGEF10O15013 1369 aa12.9□□□□□ -0.34
RNF220-206ENST00000453863 NUTM2BA6NNL0 878 aaPredicted RBP12.89□□□□□ -0.35
RNF220-206ENST00000453863 NUTM2EB1AL46 878 aaPredicted RBP12.89□□□□□ -0.35
RNF220-206ENST00000453863 NUTM2AQ8IVF1 878 aaPredicted RBP12.89□□□□□ -0.35
RNF220-206ENST00000453863 CARD11Q9BXL7 1154 aa12.89□□□□□ -0.35
RNF220-206ENST00000453863 SBNO1A3KN83 1393 aa12.89□□□□□ -0.35
RNF220-206ENST00000453863 SRPK2P78362 688 aaKnown RBP12.88□□□□□ -0.35
RNF220-206ENST00000453863 NGDNQ8NEJ9 315 aaKnown RBP12.88□□□□□ -0.35
RNF220-206ENST00000453863 CCER1Q8TC90 406 aaPredicted RBP12.88□□□□□ -0.35
RNF220-206ENST00000453863 SBNO2Q9Y2G9 1366 aa12.88□□□□□ -0.35
RNF220-206ENST00000453863 EVC2Q86UK5 1308 aa12.88□□□□□ -0.35
RNF220-206ENST00000453863 XPCQ01831 940 aaPredicted RBP12.87□□□□□ -0.35
RNF220-206ENST00000453863 KRT28Q7Z3Y7 464 aa12.87□□□□□ -0.35
RNF220-206ENST00000453863 CDK19Q9BWU1 502 aa12.87□□□□□ -0.35
RNF220-206ENST00000453863 MARF1Q9Y4F3 1742 aaKnown RBP12.87□□□□□ -0.35
RNF220-206ENST00000453863 SPATA31A3Q5VYP0 1347 aa12.87□□□□□ -0.35
RNF220-206ENST00000453863 PRR36Q9H6K5 1346 aa12.87□□□□□ -0.35
RNF220-206ENST00000453863 TRPM3Q9HCF6 1732 aaPredicted RBP12.86□□□□□ -0.35
RNF220-206ENST00000453863 HAP1P54257 671 aaPredicted RBP12.86□□□□□ -0.35
RNF220-206ENST00000453863 NBPF8Q3BBV2 869 aa12.86□□□□□ -0.35
RNF220-206ENST00000453863 ZNF772Q68DY9 489 aaPredicted RBP12.86□□□□□ -0.35
RNF220-206ENST00000453863 PMFBP1Q8TBY8 1022 aa12.86□□□□□ -0.35
RNF220-206ENST00000453863 NUDT16Q96DE0 195 aaKnown RBP12.86□□□□□ -0.35
RNF220-206ENST00000453863 CCDC61Q9Y6R9 512 aa12.85□□□□□ -0.35
RNF220-206ENST00000453863 ABCA3Q99758 1704 aa12.85□□□□□ -0.35
RNF220-206ENST00000453863 ATAD2Q6PL18 1390 aa12.84□□□□□ -0.35
RNF220-206ENST00000453863 ALS2Q96Q42 1657 aa12.84□□□□□ -0.35
RNF220-206ENST00000453863 LMOD2Q6P5Q4 547 aa12.84□□□□□ -0.35
RNF220-206ENST00000453863 PPIP5K1Q6PFW1 1433 aa12.84□□□□□ -0.35
RNF220-206ENST00000453863 POLR3AO14802 1390 aaPredicted RBP12.83□□□□□ -0.36
RNF220-206ENST00000453863 SLC24A1O60721 1099 aa12.83□□□□□ -0.36
RNF220-206ENST00000453863 C8orf37Q96NL8 207 aa12.83□□□□□ -0.36
RNF220-206ENST00000453863 BRD4O60885 1362 aaPredicted RBP12.82□□□□□ -0.36
RNF220-206ENST00000453863 ADAMTS2O95450 1211 aa12.82□□□□□ -0.36
RNF220-206ENST00000453863 AFF2P51816 1311 aa12.82□□□□□ -0.36
RNF220-206ENST00000453863 NGLY1Q96IV0 654 aa12.81□□□□□ -0.36
RNF220-206ENST00000453863 PLEKHG3A1L390 1219 aa12.8□□□□□ -0.36
RNF220-206ENST00000453863 PAK3O75914 559 aaPredicted RBP12.8□□□□□ -0.36
RNF220-206ENST00000453863 ILDR2Q71H61 639 aa12.8□□□□□ -0.36
RNF220-206ENST00000453863 CABP2Q9NPB3 220 aa12.8□□□□□ -0.36
RNF220-206ENST00000453863 ACEP12821 1306 aa12.8□□□□□ -0.36
RNF220-206ENST00000453863 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.79□□□□□ -0.36
RNF220-206ENST00000453863 USP47Q96K76 1375 aa12.79□□□□□ -0.36
RNF220-206ENST00000453863 RGS17Q9UGC6 210 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms