RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 TUSC1Q2TAM9 212 aa7.26□□□□□ -1.25
HMGB1P15-201ENST00000453854 SCUBE3Q8IX30 993 aa7.26□□□□□ -1.25
HMGB1P15-201ENST00000453854 DDX11L8A8MPP1 907 aa7.25□□□□□ -1.25
HMGB1P15-201ENST00000453854 SULF1Q8IWU6 871 aa7.25□□□□□ -1.25
HMGB1P15-201ENST00000453854 SPIRE2Q8WWL2 714 aa7.25□□□□□ -1.25
HMGB1P15-201ENST00000453854 NR1I2O75469 434 aa7.24□□□□□ -1.25
HMGB1P15-201ENST00000453854 ADH1BP00325 375 aa7.24□□□□□ -1.25
HMGB1P15-201ENST00000453854 GJA5P36382 358 aa7.24□□□□□ -1.25
HMGB1P15-201ENST00000453854 LAPTM4AQ15012 233 aa7.24□□□□□ -1.25
HMGB1P15-201ENST00000453854 PPP2R2DQ66LE6 453 aa7.24□□□□□ -1.25
HMGB1P15-201ENST00000453854 TRIM67Q6ZTA4 783 aa7.24□□□□□ -1.25
HMGB1P15-201ENST00000453854 RDH13Q8NBN7 331 aa7.24□□□□□ -1.25
HMGB1P15-201ENST00000453854 C1orf115Q9H7X2 142 aa7.24□□□□□ -1.25
HMGB1P15-201ENST00000453854 NRG2O14511 850 aaPredicted RBP7.23□□□□□ -1.25
HMGB1P15-201ENST00000453854 SPTLC1O15269 473 aa7.23□□□□□ -1.25
HMGB1P15-201ENST00000453854 SLC19A1P41440 591 aa7.23□□□□□ -1.25
HMGB1P15-201ENST00000453854 FUT2Q10981 343 aa7.23□□□□□ -1.25
HMGB1P15-201ENST00000453854 PLA2G2CQ5R387 149 aa7.23□□□□□ -1.25
HMGB1P15-201ENST00000453854 FBXO31Q5XUX0 539 aaPredicted RBP7.23□□□□□ -1.25
HMGB1P15-201ENST00000453854 LIAT1Q6ZQX7 453 aa7.23□□□□□ -1.25
HMGB1P15-201ENST00000453854 BANK1Q8NDB2 785 aa7.23□□□□□ -1.25
HMGB1P15-201ENST00000453854 LIMD1Q9UGP4 676 aa7.23□□□□□ -1.25
HMGB1P15-201ENST00000453854 PDZRN3Q9UPQ7 1066 aa7.23□□□□□ -1.25
HMGB1P15-201ENST00000453854 SPDYE5A6NIY4 337 aa7.22□□□□□ -1.25
HMGB1P15-201ENST00000453854 TRAK2O60296 914 aa7.22□□□□□ -1.25
HMGB1P15-201ENST00000453854 GCGRP47871 477 aa7.22□□□□□ -1.25
HMGB1P15-201ENST00000453854 MORN1Q5T089 497 aa7.22□□□□□ -1.25
HMGB1P15-201ENST00000453854 RIC3Q7Z5B4 369 aa7.22□□□□□ -1.25
HMGB1P15-201ENST00000453854 ANKLE1Q8NAG6 615 aa7.22□□□□□ -1.25
HMGB1P15-201ENST00000453854 CLUAP1Q96AJ1 413 aa7.22□□□□□ -1.25
HMGB1P15-201ENST00000453854 UBTFP17480 764 aaKnown RBP7.21□□□□□ -1.26
HMGB1P15-201ENST00000453854 RFC5P40937 340 aa7.21□□□□□ -1.26
HMGB1P15-201ENST00000453854 RSPH4AQ5TD94 716 aa7.21□□□□□ -1.26
HMGB1P15-201ENST00000453854 RSBN1LQ6PCB5 846 aaPredicted RBP7.21□□□□□ -1.26
HMGB1P15-201ENST00000453854 THAP11Q96EK4 314 aa7.21□□□□□ -1.26
HMGB1P15-201ENST00000453854 SLC6A16Q9GZN6 736 aa7.21□□□□□ -1.26
HMGB1P15-201ENST00000453854 TMEM259Q4ZIN3 620 aa7.2□□□□□ -1.26
HMGB1P15-201ENST00000453854 SPRYD7Q5W111 196 aa7.2□□□□□ -1.26
HMGB1P15-201ENST00000453854 TRAF7Q6Q0C0 670 aa7.2□□□□□ -1.26
HMGB1P15-201ENST00000453854 FNBP4Q8N3X1 1017 aaPredicted RBP7.2□□□□□ -1.26
HMGB1P15-201ENST00000453854 SPSB2Q99619 263 aa7.2□□□□□ -1.26
HMGB1P15-201ENST00000453854 SLC27A5Q9Y2P5 690 aa7.2□□□□□ -1.26
HMGB1P15-201ENST00000453854 MOXD2PA6NHM9 499 aa7.19□□□□□ -1.26
HMGB1P15-201ENST00000453854 APBB1O00213 710 aa7.19□□□□□ -1.26
HMGB1P15-201ENST00000453854 NUTM1Q86Y26 1132 aa7.19□□□□□ -1.26
HMGB1P15-201ENST00000453854 FAM160A2Q8N612 972 aaPredicted RBP7.19□□□□□ -1.26
HMGB1P15-201ENST00000453854 SOCS7O14512 581 aa7.18□□□□□ -1.26
HMGB1P15-201ENST00000453854 ATP6V1AP38606 617 aa7.18□□□□□ -1.26
HMGB1P15-201ENST00000453854 LILRB3O75022 631 aa7.17□□□□□ -1.26
HMGB1P15-201ENST00000453854 USP46P62068 366 aa7.17□□□□□ -1.26
HMGB1P15-201ENST00000453854 ZNF598Q86UK7 904 aaKnown RBP7.17□□□□□ -1.26
HMGB1P15-201ENST00000453854 PRDM9Q9NQV7 894 aa7.17□□□□□ -1.26
HMGB1P15-201ENST00000453854 SNRKQ9NRH2 765 aa7.17□□□□□ -1.26
HMGB1P15-201ENST00000453854 ATP1B4Q9UN42 357 aaPredicted RBP7.17□□□□□ -1.26
HMGB1P15-201ENST00000453854 ARID3CA6NKF2 412 aa7.16□□□□□ -1.26
HMGB1P15-201ENST00000453854 KDM4AO75164 1064 aa7.16□□□□□ -1.26
HMGB1P15-201ENST00000453854 QPCTQ16769 361 aa7.16□□□□□ -1.26
HMGB1P15-201ENST00000453854 RNF19BQ6ZMZ0 732 aa7.16□□□□□ -1.26
HMGB1P15-201ENST00000453854 PROSER2Q86WR7 435 aaPredicted RBP7.16□□□□□ -1.26
HMGB1P15-201ENST00000453854 POM121Q96HA1 1249 aa7.16□□□□□ -1.26
HMGB1P15-201ENST00000453854 PCDHB15Q9Y5E8 787 aa7.16□□□□□ -1.26
HMGB1P15-201ENST00000453854 NDUFV2P19404 249 aa7.15□□□□□ -1.26
HMGB1P15-201ENST00000453854 ZNF697Q5TEC3 545 aa7.15□□□□□ -1.26
HMGB1P15-201ENST00000453854 PRPF38BQ5VTL8 546 aaKnown RBP7.15□□□□□ -1.26
HMGB1P15-201ENST00000453854 BRICD5Q6PL45 260 aa7.15□□□□□ -1.26
HMGB1P15-201ENST00000453854 HLA-CQ95604 372 aa7.15□□□□□ -1.26
HMGB1P15-201ENST00000453854 COG6Q9Y2V7 657 aa7.15□□□□□ -1.26
HMGB1P15-201ENST00000453854 TNFRSF10AO00220 468 aa7.14□□□□□ -1.27
HMGB1P15-201ENST00000453854 HOXA2O43364 376 aa7.14□□□□□ -1.27
HMGB1P15-201ENST00000453854 GDF9O60383 454 aa7.14□□□□□ -1.27
HMGB1P15-201ENST00000453854 RAD21O60216 631 aa7.13□□□□□ -1.27
HMGB1P15-201ENST00000453854 FMNL1O95466 1100 aaPredicted RBP7.13□□□□□ -1.27
HMGB1P15-201ENST00000453854 MTMR14Q8NCE2 650 aa7.13□□□□□ -1.27
HMGB1P15-201ENST00000453854 FCF1Q9Y324 198 aaKnown RBP7.13□□□□□ -1.27
HMGB1P15-201ENST00000453854 PRR20EP86478 221 aa7.12□□□□□ -1.27
HMGB1P15-201ENST00000453854 PRR20CP86479 221 aa7.12□□□□□ -1.27
HMGB1P15-201ENST00000453854 PRR20DP86480 221 aa7.12□□□□□ -1.27
HMGB1P15-201ENST00000453854 PRR20BP86481 221 aa7.12□□□□□ -1.27
HMGB1P15-201ENST00000453854 PRR20AP86496 221 aa7.12□□□□□ -1.27
HMGB1P15-201ENST00000453854 RTL5Q5HYW3 569 aaPredicted RBP7.12□□□□□ -1.27
HMGB1P15-201ENST00000453854 PKD2L1Q9P0L9 805 aa7.12□□□□□ -1.27
HMGB1P15-201ENST00000453854 SALL2Q9Y467 1007 aaPredicted RBP7.12□□□□□ -1.27
HMGB1P15-201ENST00000453854 HRCP23327 699 aa7.11□□□□□ -1.27
HMGB1P15-201ENST00000453854 CSPP1Q1MSJ5 1256 aa7.11□□□□□ -1.27
HMGB1P15-201ENST00000453854 PCDHGC3Q9UN70 934 aa7.11□□□□□ -1.27
HMGB1P15-201ENST00000453854 FDX1P10109 184 aa7.1□□□□□ -1.27
HMGB1P15-201ENST00000453854 CCDC82Q8N4S0 544 aa7.1□□□□□ -1.27
HMGB1P15-201ENST00000453854 CABLES1Q8TDN4 633 aa7.1□□□□□ -1.27
HMGB1P15-201ENST00000453854 ARID3AQ99856 593 aa7.1□□□□□ -1.27
HMGB1P15-201ENST00000453854 ZBTB3Q9H5J0 574 aa7.1□□□□□ -1.27
HMGB1P15-201ENST00000453854 MYT1Q01538 1121 aa7.09□□□□□ -1.27
HMGB1P15-201ENST00000453854 GUCA2AQ02747 115 aa7.09□□□□□ -1.27
HMGB1P15-201ENST00000453854 MSS51Q4VC12 460 aa7.09□□□□□ -1.27
HMGB1P15-201ENST00000453854 ZNF777Q9ULD5 760 aaPredicted RBP7.09□□□□□ -1.27
HMGB1P15-201ENST00000453854 NUTM2BA6NNL0 878 aaPredicted RBP7.08□□□□□ -1.28
HMGB1P15-201ENST00000453854 NUTM2EB1AL46 878 aaPredicted RBP7.08□□□□□ -1.28
HMGB1P15-201ENST00000453854 AP1G2O75843 785 aa7.08□□□□□ -1.28
HMGB1P15-201ENST00000453854 RPIAP49247 311 aa7.08□□□□□ -1.28
HMGB1P15-201ENST00000453854 FOXC1Q12948 553 aa7.08□□□□□ -1.28
HMGB1P15-201ENST00000453854 NUTM2DQ5VT03 806 aaPredicted RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms