RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 NOL8Q76FK4 1167 aaKnown RBP17.27■□□□□ 0.36
UBE2D3-210ENST00000453744 FAM135AQ9P2D6 1515 aa17.27■□□□□ 0.36
UBE2D3-210ENST00000453744 MCTP1Q6DN14 999 aa17.27■□□□□ 0.36
UBE2D3-210ENST00000453744 MAGI2Q86UL8 1455 aa17.26■□□□□ 0.35
UBE2D3-210ENST00000453744 TMEM57Q8N5G2 664 aa17.26■□□□□ 0.35
UBE2D3-210ENST00000453744 ARHGAP5Q13017 1502 aa17.26■□□□□ 0.35
UBE2D3-210ENST00000453744 CCDC141Q6ZP82 1450 aa17.26■□□□□ 0.35
UBE2D3-210ENST00000453744 SSH1Q8WYL5 1049 aa17.26■□□□□ 0.35
UBE2D3-210ENST00000453744 R3HCC1Q9Y3T6 440 aaKnown RBP17.26■□□□□ 0.35
UBE2D3-210ENST00000453744 KIAA1211Q6ZU35 1233 aa17.25■□□□□ 0.35
UBE2D3-210ENST00000453744 ADGRL2O95490 1459 aa17.25■□□□□ 0.35
UBE2D3-210ENST00000453744 ANTXR1Q9H6X2 564 aa17.25■□□□□ 0.35
UBE2D3-210ENST00000453744 SKOR2Q2VWA4 1001 aaPredicted RBP17.25■□□□□ 0.35
UBE2D3-210ENST00000453744 CAVIN1Q6NZI2 390 aaKnown RBP17.24■□□□□ 0.35
UBE2D3-210ENST00000453744 TRIM27P14373 513 aa17.24■□□□□ 0.35
UBE2D3-210ENST00000453744 WDR63Q8IWG1 891 aa17.24■□□□□ 0.35
UBE2D3-210ENST00000453744 RRP9O43818 475 aaKnown RBP17.23■□□□□ 0.35
UBE2D3-210ENST00000453744 ATF7IPQ6VMQ6 1270 aa17.23■□□□□ 0.35
UBE2D3-210ENST00000453744 CABP2Q9NPB3 220 aa17.23■□□□□ 0.35
UBE2D3-210ENST00000453744 GRIN2AQ12879 1464 aa17.23■□□□□ 0.35
UBE2D3-210ENST00000453744 AAMPQ13685 434 aa17.23■□□□□ 0.35
UBE2D3-210ENST00000453744 RBM42Q9BTD8 480 aaKnown RBP17.23■□□□□ 0.35
UBE2D3-210ENST00000453744 KIAA0556O60303 1618 aa17.23■□□□□ 0.35
UBE2D3-210ENST00000453744 TRMT2AQ8IZ69 625 aaKnown RBP17.22■□□□□ 0.35
UBE2D3-210ENST00000453744 NINLQ9Y2I6 1382 aa17.22■□□□□ 0.35
UBE2D3-210ENST00000453744 SSFA2P28290 1259 aa17.22■□□□□ 0.35
UBE2D3-210ENST00000453744 ADGRF5Q8IZF2 1346 aa17.22■□□□□ 0.35
UBE2D3-210ENST00000453744 NSD3Q9BZ95 1437 aa17.22■□□□□ 0.35
UBE2D3-210ENST00000453744 MPNDQ8N594 471 aa17.21■□□□□ 0.35
UBE2D3-210ENST00000453744 RNF214Q8ND24 703 aa17.21■□□□□ 0.34
UBE2D3-210ENST00000453744 ASXL1Q8IXJ9 1541 aa17.2■□□□□ 0.34
UBE2D3-210ENST00000453744 STAG3Q9UJ98 1225 aa17.2■□□□□ 0.34
UBE2D3-210ENST00000453744 ATP10BO94823 1461 aa17.2■□□□□ 0.34
UBE2D3-210ENST00000453744 GPRASP1Q5JY77 1395 aa17.2■□□□□ 0.34
UBE2D3-210ENST00000453744 POLR1AO95602 1720 aaPredicted RBP17.19■□□□□ 0.34
UBE2D3-210ENST00000453744 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.19■□□□□ 0.34
UBE2D3-210ENST00000453744 NPM1P06748 294 aaKnown RBP eCLIP17.19■□□□□ 0.34
UBE2D3-210ENST00000453744 CHD1LQ86WJ1 897 aa17.19■□□□□ 0.34
UBE2D3-210ENST00000453744 SYNJ2O15056 1496 aa17.18■□□□□ 0.34
UBE2D3-210ENST00000453744 CASC1Q6TDU7 716 aa17.18■□□□□ 0.34
UBE2D3-210ENST00000453744 ADAMTS12P58397 1594 aa17.18■□□□□ 0.34
UBE2D3-210ENST00000453744 PTMSP20962 102 aa17.18■□□□□ 0.34
UBE2D3-210ENST00000453744 KIF21AQ7Z4S6 1674 aa17.17■□□□□ 0.34
UBE2D3-210ENST00000453744 ITSN2Q9NZM3 1697 aa17.17■□□□□ 0.34
UBE2D3-210ENST00000453744 MRC2Q9UBG0 1479 aa17.17■□□□□ 0.34
UBE2D3-210ENST00000453744 HMOX1P09601 288 aa17.17■□□□□ 0.34
UBE2D3-210ENST00000453744 K7ELQ4 463 aaPredicted RBP17.17■□□□□ 0.34
UBE2D3-210ENST00000453744 PIK3C2GO75747 1445 aa17.16■□□□□ 0.34
UBE2D3-210ENST00000453744 SCAF11Q99590 1463 aaKnown RBP17.16■□□□□ 0.34
UBE2D3-210ENST00000453744 GAS2L3Q86XJ1 694 aa17.16■□□□□ 0.34
UBE2D3-210ENST00000453744 PRPF40AO75400 957 aaKnown RBP17.16■□□□□ 0.34
UBE2D3-210ENST00000453744 THUMPD2Q9BTF0 503 aaKnown RBP17.16■□□□□ 0.34
UBE2D3-210ENST00000453744 INSRP06213 1382 aa17.15■□□□□ 0.34
UBE2D3-210ENST00000453744 IFT140Q96RY7 1462 aa17.15■□□□□ 0.34
UBE2D3-210ENST00000453744 TMPOP42166 694 aaKnown RBP17.15■□□□□ 0.34
UBE2D3-210ENST00000453744 MINK1Q8N4C8 1332 aaPredicted RBP17.15■□□□□ 0.34
UBE2D3-210ENST00000453744 FSD2A1L4K1 749 aa17.14■□□□□ 0.33
UBE2D3-210ENST00000453744 CCDC173Q0VFZ6 552 aa17.14■□□□□ 0.33
UBE2D3-210ENST00000453744 KIF16BQ96L93 1317 aa17.14■□□□□ 0.33
UBE2D3-210ENST00000453744 CHMP4BQ9H444 224 aaKnown RBP17.14■□□□□ 0.33
UBE2D3-210ENST00000453744 SOX12O15370 315 aa17.13■□□□□ 0.33
UBE2D3-210ENST00000453744 WDR7Q9Y4E6 1490 aa17.13■□□□□ 0.33
UBE2D3-210ENST00000453744 TPM2P07951 284 aa17.13■□□□□ 0.33
UBE2D3-210ENST00000453744 DIAPH1O60610 1272 aaKnown RBP17.13■□□□□ 0.33
UBE2D3-210ENST00000453744 XPCQ01831 940 aaPredicted RBP17.12■□□□□ 0.33
UBE2D3-210ENST00000453744 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.12■□□□□ 0.33
UBE2D3-210ENST00000453744 PLA2R1Q13018 1463 aa17.12■□□□□ 0.33
UBE2D3-210ENST00000453744 ZSCAN30Q86W11 494 aa17.12■□□□□ 0.33
UBE2D3-210ENST00000453744 EVC2Q86UK5 1308 aa17.11■□□□□ 0.33
UBE2D3-210ENST00000453744 KDM5DQ9BY66 1539 aa17.11■□□□□ 0.33
UBE2D3-210ENST00000453744 ISY1Q9ULR0 285 aaKnown RBP17.11■□□□□ 0.33
UBE2D3-210ENST00000453744 ADGBQ8N7X0 1667 aa17.11■□□□□ 0.33
UBE2D3-210ENST00000453744 CIZ1Q9ULV3 898 aaPredicted RBP17.1■□□□□ 0.33
UBE2D3-210ENST00000453744 ERBB4Q15303 1308 aa17.1■□□□□ 0.33
UBE2D3-210ENST00000453744 ST18O60284 1047 aa17.1■□□□□ 0.33
UBE2D3-210ENST00000453744 CDC45O75419 566 aa17.1■□□□□ 0.33
UBE2D3-210ENST00000453744 GAS2L2Q8NHY3 880 aa17.1■□□□□ 0.33
UBE2D3-210ENST00000453744 STAC3Q96MF2 364 aa17.1■□□□□ 0.33
UBE2D3-210ENST00000453744 TBC1D9Q6ZT07 1266 aa17.1■□□□□ 0.33
UBE2D3-210ENST00000453744 SYCP2Q9BX26 1530 aa17.1■□□□□ 0.33
UBE2D3-210ENST00000453744 FBLN1P23142 703 aa17.09■□□□□ 0.33
UBE2D3-210ENST00000453744 SLC4A10Q6U841 1118 aa17.09■□□□□ 0.33
UBE2D3-210ENST00000453744 PRKAR2BP31323 418 aa17.09■□□□□ 0.33
UBE2D3-210ENST00000453744 SHANK2Q9UPX8 1470 aa17.08■□□□□ 0.33
UBE2D3-210ENST00000453744 CEP170Q5SW79 1584 aa17.08■□□□□ 0.32
UBE2D3-210ENST00000453744 RBM27Q9P2N5 1060 aaKnown RBP17.08■□□□□ 0.32
UBE2D3-210ENST00000453744 BAG4O95429 457 aaKnown RBP17.08■□□□□ 0.32
UBE2D3-210ENST00000453744 SCAPERQ9BY12 1400 aa17.08■□□□□ 0.32
UBE2D3-210ENST00000453744 HDAC1Q13547 482 aaPredicted RBP17.07■□□□□ 0.32
UBE2D3-210ENST00000453744 HDGFL2Q7Z4V5 671 aaPredicted RBP17.07■□□□□ 0.32
UBE2D3-210ENST00000453744 NUCB2P80303 420 aa17.07■□□□□ 0.32
UBE2D3-210ENST00000453744 TERF2IPQ9NYB0 399 aa17.07■□□□□ 0.32
UBE2D3-210ENST00000453744 NUP160Q12769 1436 aa17.07■□□□□ 0.32
UBE2D3-210ENST00000453744 TARBP1Q13395 1621 aaKnown RBP17.06■□□□□ 0.32
UBE2D3-210ENST00000453744 POLR3AO14802 1390 aaPredicted RBP17.06■□□□□ 0.32
UBE2D3-210ENST00000453744 PBRM1Q86U86 1689 aa17.06■□□□□ 0.32
UBE2D3-210ENST00000453744 CD2BP2O95400 341 aaKnown RBP17.05■□□□□ 0.32
UBE2D3-210ENST00000453744 RAB3GAP1Q15042 981 aa17.05■□□□□ 0.32
UBE2D3-210ENST00000453744 SMC5Q8IY18 1101 aa17.05■□□□□ 0.32
UBE2D3-210ENST00000453744 NUCB1Q02818 461 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms