RNA–Protein interactions for RNA: ENST00000453580.1

TNFRSF4-202, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 3

Gene TNFRSF4, Length 393 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-202ENST00000453580 DHX57Q6P158 1386 aaKnown RBP25.02■■□□□ 1.6
TNFRSF4-202ENST00000453580 YTHDC2Q9H6S0 1430 aaKnown RBP25.01■■□□□ 1.59
TNFRSF4-202ENST00000453580 ZNF772Q68DY9 489 aaPredicted RBP24.99■■□□□ 1.59
TNFRSF4-202ENST00000453580 TMEM132EQ6IEE7 984 aa24.99■■□□□ 1.59
TNFRSF4-202ENST00000453580 LRP6O75581 1613 aa24.94■■□□□ 1.58
TNFRSF4-202ENST00000453580 NPHP3Q7Z494 1330 aa24.94■■□□□ 1.58
TNFRSF4-202ENST00000453580 WAPLQ7Z5K2 1190 aa24.94■■□□□ 1.58
TNFRSF4-202ENST00000453580 ORAI2Q96SN7 254 aa24.94■■□□□ 1.58
TNFRSF4-202ENST00000453580 SOS2Q07890 1332 aaPredicted RBP24.93■■□□□ 1.58
TNFRSF4-202ENST00000453580 NUTM2BA6NNL0 878 aaPredicted RBP24.93■■□□□ 1.58
TNFRSF4-202ENST00000453580 NUTM2EB1AL46 878 aaPredicted RBP24.93■■□□□ 1.58
TNFRSF4-202ENST00000453580 ESCO1Q5FWF5 840 aa24.93■■□□□ 1.58
TNFRSF4-202ENST00000453580 CFAP70Q5T0N1 1121 aa24.93■■□□□ 1.58
TNFRSF4-202ENST00000453580 POTEAQ6S8J7 498 aa24.93■■□□□ 1.58
TNFRSF4-202ENST00000453580 NUTM2AQ8IVF1 878 aaPredicted RBP24.93■■□□□ 1.58
TNFRSF4-202ENST00000453580 PNPLA6Q8IY17 1366 aa24.92■■□□□ 1.58
TNFRSF4-202ENST00000453580 DCAF11Q8TEB1 546 aa24.91■■□□□ 1.58
TNFRSF4-202ENST00000453580 DDX17Q92841 729 aaKnown RBP24.89■■□□□ 1.58
TNFRSF4-202ENST00000453580 DLC1Q96QB1 1528 aa24.89■■□□□ 1.57
TNFRSF4-202ENST00000453580 FMN2Q9NZ56 1722 aa24.89■■□□□ 1.57
TNFRSF4-202ENST00000453580 POGKQ9P215 609 aa24.87■■□□□ 1.57
TNFRSF4-202ENST00000453580 KDM2AQ9Y2K7 1162 aa24.87■■□□□ 1.57
TNFRSF4-202ENST00000453580 KIF1AQ12756 1690 aa24.87■■□□□ 1.57
TNFRSF4-202ENST00000453580 PLEKHH1Q9ULM0 1364 aa24.86■■□□□ 1.57
TNFRSF4-202ENST00000453580 PRAM1Q96QH2 718 aa24.83■■□□□ 1.57
TNFRSF4-202ENST00000453580 EIF3AQ14152 1382 aaKnown RBP24.81■■□□□ 1.56
TNFRSF4-202ENST00000453580 ADGRB1O14514 1584 aa24.81■■□□□ 1.56
TNFRSF4-202ENST00000453580 FOXO3O43524 673 aa24.81■■□□□ 1.56
TNFRSF4-202ENST00000453580 COL22A1Q8NFW1 1626 aaPredicted RBP24.81■■□□□ 1.56
TNFRSF4-202ENST00000453580 AFF2P51816 1311 aa24.81■■□□□ 1.56
TNFRSF4-202ENST00000453580 NUTM2FA1L443 756 aa24.8■■□□□ 1.56
TNFRSF4-202ENST00000453580 RXRBP28702 533 aa24.8■■□□□ 1.56
TNFRSF4-202ENST00000453580 PXDNQ92626 1479 aa24.79■■□□□ 1.56
TNFRSF4-202ENST00000453580 C8orf37Q96NL8 207 aa24.79■■□□□ 1.56
TNFRSF4-202ENST00000453580 PSME1Q06323 249 aa24.78■■□□□ 1.56
TNFRSF4-202ENST00000453580 NGLY1Q96IV0 654 aa24.78■■□□□ 1.56
TNFRSF4-202ENST00000453580 ADGRB2O60241 1585 aa24.77■■□□□ 1.56
TNFRSF4-202ENST00000453580 TRAK1Q9UPV9 953 aa24.77■■□□□ 1.56
TNFRSF4-202ENST00000453580 ANKARQ7Z5J8 1434 aa24.77■■□□□ 1.56
TNFRSF4-202ENST00000453580 SAFB2Q14151 953 aaKnown RBP eCLIP24.76■■□□□ 1.55
TNFRSF4-202ENST00000453580 CDK12Q9NYV4 1490 aaPredicted RBP24.76■■□□□ 1.55
TNFRSF4-202ENST00000453580 ADAMTS2O95450 1211 aa24.75■■□□□ 1.55
TNFRSF4-202ENST00000453580 PHF8Q9UPP1 1060 aa24.75■■□□□ 1.55
TNFRSF4-202ENST00000453580 KIAA1210Q9ULL0 1709 aa24.75■■□□□ 1.55
TNFRSF4-202ENST00000453580 RGPD8O14715 1765 aaPredicted RBP24.74■■□□□ 1.55
TNFRSF4-202ENST00000453580 KRT28Q7Z3Y7 464 aa24.72■■□□□ 1.55
TNFRSF4-202ENST00000453580 QTRT2Q9H974 415 aaKnown RBP24.71■■□□□ 1.55
TNFRSF4-202ENST00000453580 SPATA31A3Q5VYP0 1347 aa24.7■■□□□ 1.54
TNFRSF4-202ENST00000453580 RBM6P78332 1123 aaKnown RBP24.7■■□□□ 1.54
TNFRSF4-202ENST00000453580 XPCQ01831 940 aaPredicted RBP24.7■■□□□ 1.54
TNFRSF4-202ENST00000453580 MARF1Q9Y4F3 1742 aaKnown RBP24.69■■□□□ 1.54
TNFRSF4-202ENST00000453580 USP21Q9UK80 565 aa24.68■■□□□ 1.54
TNFRSF4-202ENST00000453580 ARHGEF28Q8N1W1 1705 aaKnown RBP24.67■■□□□ 1.54
TNFRSF4-202ENST00000453580 FNBP4Q8N3X1 1017 aaPredicted RBP24.67■■□□□ 1.54
TNFRSF4-202ENST00000453580 SBNO1A3KN83 1393 aa24.67■■□□□ 1.54
TNFRSF4-202ENST00000453580 MINK1Q8N4C8 1332 aaPredicted RBP24.66■■□□□ 1.54
TNFRSF4-202ENST00000453580 WASLO00401 505 aaPredicted RBP24.66■■□□□ 1.54
TNFRSF4-202ENST00000453580 TRPC5Q9UL62 973 aaPredicted RBP24.66■■□□□ 1.54
TNFRSF4-202ENST00000453580 ARHGEF10O15013 1369 aa24.66■■□□□ 1.54
TNFRSF4-202ENST00000453580 TULP4Q9NRJ4 1543 aa24.66■■□□□ 1.54
TNFRSF4-202ENST00000453580 TNS3Q68CZ2 1445 aa24.65■■□□□ 1.54
TNFRSF4-202ENST00000453580 HAP1P54257 671 aaPredicted RBP24.64■■□□□ 1.54
TNFRSF4-202ENST00000453580 HIRIP3Q9BW71 556 aaPredicted RBP24.64■■□□□ 1.54
TNFRSF4-202ENST00000453580 GPRASP1Q5JY77 1395 aa24.64■■□□□ 1.53
TNFRSF4-202ENST00000453580 USP32Q8NFA0 1604 aa24.63■■□□□ 1.53
TNFRSF4-202ENST00000453580 ITSN1Q15811 1721 aa24.62■■□□□ 1.53
TNFRSF4-202ENST00000453580 PMFBP1Q8TBY8 1022 aa24.6■■□□□ 1.53
TNFRSF4-202ENST00000453580 LMOD2Q6P5Q4 547 aa24.58■■□□□ 1.53
TNFRSF4-202ENST00000453580 NGDNQ8NEJ9 315 aaKnown RBP24.58■■□□□ 1.53
TNFRSF4-202ENST00000453580 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.56■■□□□ 1.52
TNFRSF4-202ENST00000453580 ATRNO75882 1429 aa24.55■■□□□ 1.52
TNFRSF4-202ENST00000453580 NUDT16Q96DE0 195 aaKnown RBP24.54■■□□□ 1.52
TNFRSF4-202ENST00000453580 PRR36Q9H6K5 1346 aa24.54■■□□□ 1.52
TNFRSF4-202ENST00000453580 RGS12O14924 1447 aa24.53■■□□□ 1.52
TNFRSF4-202ENST00000453580 L3MBTL2Q969R5 705 aa24.53■■□□□ 1.52
TNFRSF4-202ENST00000453580 BCL9LQ86UU0 1499 aa24.52■■□□□ 1.52
TNFRSF4-202ENST00000453580 UNC5CLQ8IV45 518 aa24.52■■□□□ 1.52
TNFRSF4-202ENST00000453580 UPF1Q92900 1129 aaKnown RBP eCLIP24.52■■□□□ 1.52
TNFRSF4-202ENST00000453580 CDK19Q9BWU1 502 aa24.52■■□□□ 1.52
TNFRSF4-202ENST00000453580 TRPM3Q9HCF6 1732 aaPredicted RBP24.52■■□□□ 1.52
TNFRSF4-202ENST00000453580 NBPF1Q3BBV0 1214 aa24.51■■□□□ 1.51
TNFRSF4-202ENST00000453580 CENPJQ9HC77 1338 aaPredicted RBP24.51■■□□□ 1.51
TNFRSF4-202ENST00000453580 ATP7BP35670 1465 aa24.51■■□□□ 1.51
TNFRSF4-202ENST00000453580 SLIT2O94813 1529 aa24.51■■□□□ 1.51
TNFRSF4-202ENST00000453580 CCDC61Q9Y6R9 512 aa24.5■■□□□ 1.51
TNFRSF4-202ENST00000453580 NEUROD1Q13562 356 aa24.49■■□□□ 1.51
TNFRSF4-202ENST00000453580 GJD4Q96KN9 370 aaPredicted RBP24.49■■□□□ 1.51
TNFRSF4-202ENST00000453580 ALS2Q96Q42 1657 aa24.49■■□□□ 1.51
TNFRSF4-202ENST00000453580 ABCA3Q99758 1704 aa24.49■■□□□ 1.51
TNFRSF4-202ENST00000453580 NWD2Q9ULI1 1742 aa24.49■■□□□ 1.51
TNFRSF4-202ENST00000453580 ATAD2Q6PL18 1390 aa24.47■■□□□ 1.51
TNFRSF4-202ENST00000453580 SIN3AQ96ST3 1273 aa24.47■■□□□ 1.51
TNFRSF4-202ENST00000453580 PAK3O75914 559 aaPredicted RBP24.46■■□□□ 1.51
TNFRSF4-202ENST00000453580 CABLES1Q8TDN4 633 aa24.46■■□□□ 1.51
TNFRSF4-202ENST00000453580 TRPM1Q7Z4N2 1603 aa24.45■■□□□ 1.5
TNFRSF4-202ENST00000453580 TOPAZ1Q8N9V7 1692 aa24.44■■□□□ 1.5
TNFRSF4-202ENST00000453580 PLEKHG3A1L390 1219 aa24.44■■□□□ 1.5
TNFRSF4-202ENST00000453580 SRPK2P78362 688 aaKnown RBP24.44■■□□□ 1.5
TNFRSF4-202ENST00000453580 TRIM26Q12899 539 aaPredicted RBP24.44■■□□□ 1.5
TNFRSF4-202ENST00000453580 QRICH2Q9H0J4 1663 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms