RNA–Protein interactions for RNA: ENST00000453536.5

RFTN1-207, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 5

Gene RFTN1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-207ENST00000453536 YTHDC2Q9H6S0 1430 aaKnown RBP20.81■□□□□ 0.92
RFTN1-207ENST00000453536 FMN2Q9NZ56 1722 aa20.81■□□□□ 0.92
RFTN1-207ENST00000453536 LAMC1P11047 1609 aa20.8■□□□□ 0.92
RFTN1-207ENST00000453536 NUTM2BA6NNL0 878 aaPredicted RBP20.79■□□□□ 0.92
RFTN1-207ENST00000453536 NUTM2EB1AL46 878 aaPredicted RBP20.79■□□□□ 0.92
RFTN1-207ENST00000453536 NUTM2AQ8IVF1 878 aaPredicted RBP20.79■□□□□ 0.92
RFTN1-207ENST00000453536 ADGRB1O14514 1584 aa20.78■□□□□ 0.92
RFTN1-207ENST00000453536 KDM2AQ9Y2K7 1162 aa20.78■□□□□ 0.92
RFTN1-207ENST00000453536 DHX57Q6P158 1386 aaKnown RBP20.76■□□□□ 0.91
RFTN1-207ENST00000453536 XPCQ01831 940 aaPredicted RBP20.76■□□□□ 0.91
RFTN1-207ENST00000453536 SAFB2Q14151 953 aaKnown RBP eCLIP20.76■□□□□ 0.91
RFTN1-207ENST00000453536 C14orf93Q9H972 538 aaKnown RBP20.76■□□□□ 0.91
RFTN1-207ENST00000453536 PNPLA6Q8IY17 1366 aa20.75■□□□□ 0.91
RFTN1-207ENST00000453536 ABCC11Q96J66 1382 aa20.75■□□□□ 0.91
RFTN1-207ENST00000453536 USP32Q8NFA0 1604 aa20.73■□□□□ 0.91
RFTN1-207ENST00000453536 DCAF11Q8TEB1 546 aa20.72■□□□□ 0.91
RFTN1-207ENST00000453536 SPATA31A6Q5VVP1 1343 aa20.71■□□□□ 0.91
RFTN1-207ENST00000453536 PXDNQ92626 1479 aa20.7■□□□□ 0.9
RFTN1-207ENST00000453536 MEX3CQ5U5Q3 659 aaKnown RBP20.7■□□□□ 0.9
RFTN1-207ENST00000453536 ARHGEF28Q8N1W1 1705 aaKnown RBP20.7■□□□□ 0.9
RFTN1-207ENST00000453536 ESCO1Q5FWF5 840 aa20.69■□□□□ 0.9
RFTN1-207ENST00000453536 PRAM1Q96QH2 718 aa20.68■□□□□ 0.9
RFTN1-207ENST00000453536 SOS2Q07890 1332 aaPredicted RBP20.68■□□□□ 0.9
RFTN1-207ENST00000453536 FOXO3O43524 673 aa20.66■□□□□ 0.9
RFTN1-207ENST00000453536 HRCP23327 699 aa20.66■□□□□ 0.9
RFTN1-207ENST00000453536 TRAK1Q9UPV9 953 aa20.66■□□□□ 0.9
RFTN1-207ENST00000453536 COL22A1Q8NFW1 1626 aaPredicted RBP20.66■□□□□ 0.9
RFTN1-207ENST00000453536 DLC1Q96QB1 1528 aa20.65■□□□□ 0.9
RFTN1-207ENST00000453536 ACIN1Q9UKV3 1341 aaKnown RBP20.65■□□□□ 0.9
RFTN1-207ENST00000453536 LRRC59Q96AG4 307 aaKnown RBP20.65■□□□□ 0.9
RFTN1-207ENST00000453536 HIRIP3Q9BW71 556 aaPredicted RBP20.65■□□□□ 0.9
RFTN1-207ENST00000453536 ADAMTS2O95450 1211 aa20.64■□□□□ 0.89
RFTN1-207ENST00000453536 AFF2P51816 1311 aa20.63■□□□□ 0.89
RFTN1-207ENST00000453536 C8orf37Q96NL8 207 aa20.63■□□□□ 0.89
RFTN1-207ENST00000453536 KIF1AQ12756 1690 aa20.63■□□□□ 0.89
RFTN1-207ENST00000453536 ADGRB2O60241 1585 aa20.63■□□□□ 0.89
RFTN1-207ENST00000453536 MARF1Q9Y4F3 1742 aaKnown RBP20.62■□□□□ 0.89
RFTN1-207ENST00000453536 MINK1Q8N4C8 1332 aaPredicted RBP20.61■□□□□ 0.89
RFTN1-207ENST00000453536 PLEKHG5O94827 1062 aa20.6■□□□□ 0.89
RFTN1-207ENST00000453536 SIN3AQ96ST3 1273 aa20.59■□□□□ 0.89
RFTN1-207ENST00000453536 ABCA3Q99758 1704 aa20.58■□□□□ 0.89
RFTN1-207ENST00000453536 PRR36Q9H6K5 1346 aa20.58■□□□□ 0.89
RFTN1-207ENST00000453536 NBPF1Q3BBV0 1214 aa20.57■□□□□ 0.88
RFTN1-207ENST00000453536 POGKQ9P215 609 aa20.57■□□□□ 0.88
RFTN1-207ENST00000453536 NPHP3Q7Z494 1330 aa20.56■□□□□ 0.88
RFTN1-207ENST00000453536 PMFBP1Q8TBY8 1022 aa20.56■□□□□ 0.88
RFTN1-207ENST00000453536 SIRT1Q96EB6 747 aa20.56■□□□□ 0.88
RFTN1-207ENST00000453536 TRPM3Q9HCF6 1732 aaPredicted RBP20.56■□□□□ 0.88
RFTN1-207ENST00000453536 KIAA1210Q9ULL0 1709 aa20.56■□□□□ 0.88
RFTN1-207ENST00000453536 PHF8Q9UPP1 1060 aa20.53■□□□□ 0.88
RFTN1-207ENST00000453536 ZNF772Q68DY9 489 aaPredicted RBP20.52■□□□□ 0.88
RFTN1-207ENST00000453536 RGS12O14924 1447 aa20.52■□□□□ 0.87
RFTN1-207ENST00000453536 KRT28Q7Z3Y7 464 aa20.51■□□□□ 0.87
RFTN1-207ENST00000453536 CABLES1Q8TDN4 633 aa20.51■□□□□ 0.87
RFTN1-207ENST00000453536 TULP4Q9NRJ4 1543 aa20.51■□□□□ 0.87
RFTN1-207ENST00000453536 NGLY1Q96IV0 654 aa20.5■□□□□ 0.87
RFTN1-207ENST00000453536 SPATA31A3Q5VYP0 1347 aa20.5■□□□□ 0.87
RFTN1-207ENST00000453536 TOPAZ1Q8N9V7 1692 aa20.49■□□□□ 0.87
RFTN1-207ENST00000453536 ALS2Q96Q42 1657 aa20.49■□□□□ 0.87
RFTN1-207ENST00000453536 NEUROD1Q13562 356 aa20.49■□□□□ 0.87
RFTN1-207ENST00000453536 ATP7BP35670 1465 aa20.49■□□□□ 0.87
RFTN1-207ENST00000453536 TRPM1Q7Z4N2 1603 aa20.49■□□□□ 0.87
RFTN1-207ENST00000453536 QRICH2Q9H0J4 1663 aa20.48■□□□□ 0.87
RFTN1-207ENST00000453536 TNS3Q68CZ2 1445 aa20.48■□□□□ 0.87
RFTN1-207ENST00000453536 L3MBTL2Q969R5 705 aa20.48■□□□□ 0.87
RFTN1-207ENST00000453536 PLCH1Q4KWH8 1693 aa20.48■□□□□ 0.87
RFTN1-207ENST00000453536 CRYBG1Q9Y4K1 1723 aa20.47■□□□□ 0.87
RFTN1-207ENST00000453536 QTRT2Q9H974 415 aaKnown RBP20.47■□□□□ 0.87
RFTN1-207ENST00000453536 ANKARQ7Z5J8 1434 aa20.46■□□□□ 0.87
RFTN1-207ENST00000453536 WASLO00401 505 aaPredicted RBP20.46■□□□□ 0.87
RFTN1-207ENST00000453536 RXRBP28702 533 aa20.46■□□□□ 0.87
RFTN1-207ENST00000453536 ITSN1Q15811 1721 aa20.46■□□□□ 0.87
RFTN1-207ENST00000453536 BCL9LQ86UU0 1499 aa20.45■□□□□ 0.86
RFTN1-207ENST00000453536 LMOD2Q6P5Q4 547 aa20.44■□□□□ 0.86
RFTN1-207ENST00000453536 USP21Q9UK80 565 aa20.44■□□□□ 0.86
RFTN1-207ENST00000453536 ATRNO75882 1429 aa20.42■□□□□ 0.86
RFTN1-207ENST00000453536 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.41■□□□□ 0.86
RFTN1-207ENST00000453536 GLI3P10071 1580 aa20.41■□□□□ 0.86
RFTN1-207ENST00000453536 PSME1Q06323 249 aa20.4■□□□□ 0.86
RFTN1-207ENST00000453536 FNBP4Q8N3X1 1017 aaPredicted RBP20.4■□□□□ 0.86
RFTN1-207ENST00000453536 CDK12Q9NYV4 1490 aaPredicted RBP20.39■□□□□ 0.85
RFTN1-207ENST00000453536 CDK19Q9BWU1 502 aa20.39■□□□□ 0.85
RFTN1-207ENST00000453536 BRWD3Q6RI45 1802 aa20.39■□□□□ 0.85
RFTN1-207ENST00000453536 EP400Q96L91 3159 aa20.38■□□□□ 0.85
RFTN1-207ENST00000453536 SLIT2O94813 1529 aa20.38■□□□□ 0.85
RFTN1-207ENST00000453536 SBNO1A3KN83 1393 aa20.38■□□□□ 0.85
RFTN1-207ENST00000453536 RBM6P78332 1123 aaKnown RBP20.38■□□□□ 0.85
RFTN1-207ENST00000453536 NBPF8Q3BBV2 869 aa20.38■□□□□ 0.85
RFTN1-207ENST00000453536 NUDT16Q96DE0 195 aaKnown RBP20.38■□□□□ 0.85
RFTN1-207ENST00000453536 STAC3Q96MF2 364 aa20.38■□□□□ 0.85
RFTN1-207ENST00000453536 NRAPQ86VF7 1730 aa20.38■□□□□ 0.85
RFTN1-207ENST00000453536 UPF1Q92900 1129 aaKnown RBP eCLIP20.37■□□□□ 0.85
RFTN1-207ENST00000453536 PHRF1Q9P1Y6 1649 aaKnown RBP20.37■□□□□ 0.85
RFTN1-207ENST00000453536 NUTM2GQ5VZR2 741 aa20.34■□□□□ 0.85
RFTN1-207ENST00000453536 CABP2Q9NPB3 220 aa20.34■□□□□ 0.85
RFTN1-207ENST00000453536 NWD2Q9ULI1 1742 aa20.33■□□□□ 0.85
RFTN1-207ENST00000453536 RALGAPBQ86X10 1494 aa20.33■□□□□ 0.85
RFTN1-207ENST00000453536 NGDNQ8NEJ9 315 aaKnown RBP20.33■□□□□ 0.85
RFTN1-207ENST00000453536 TRPC5Q9UL62 973 aaPredicted RBP20.33■□□□□ 0.85
RFTN1-207ENST00000453536 CENPJQ9HC77 1338 aaPredicted RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms