RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 FBXO41Q8TF61 875 aa20.71■□□□□ 0.91
NCKIPSD-207ENST00000453349 GPRASP1Q5JY77 1395 aa20.71■□□□□ 0.91
NCKIPSD-207ENST00000453349 ADGRL3Q9HAR2 1447 aa20.7■□□□□ 0.9
NCKIPSD-207ENST00000453349 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.69■□□□□ 0.9
NCKIPSD-207ENST00000453349 SLAIN2Q9P270 581 aa20.68■□□□□ 0.9
NCKIPSD-207ENST00000453349 EIF3AQ14152 1382 aaKnown RBP20.68■□□□□ 0.9
NCKIPSD-207ENST00000453349 PIP4K2BP78356 416 aa20.67■□□□□ 0.9
NCKIPSD-207ENST00000453349 SCAF1Q9H7N4 1312 aaKnown RBP20.67■□□□□ 0.9
NCKIPSD-207ENST00000453349 CENPJQ9HC77 1338 aaPredicted RBP20.67■□□□□ 0.9
NCKIPSD-207ENST00000453349 DCCP43146 1447 aa20.67■□□□□ 0.9
NCKIPSD-207ENST00000453349 ARHGEF28Q8N1W1 1705 aaKnown RBP20.67■□□□□ 0.9
NCKIPSD-207ENST00000453349 MINK1Q8N4C8 1332 aaPredicted RBP20.66■□□□□ 0.9
NCKIPSD-207ENST00000453349 NALCNQ8IZF0 1738 aa20.66■□□□□ 0.9
NCKIPSD-207ENST00000453349 HIRIP3Q9BW71 556 aaPredicted RBP20.64■□□□□ 0.89
NCKIPSD-207ENST00000453349 WASLO00401 505 aaPredicted RBP20.6■□□□□ 0.89
NCKIPSD-207ENST00000453349 CDC42BPGQ6DT37 1551 aa20.59■□□□□ 0.89
NCKIPSD-207ENST00000453349 NUTM2FA1L443 756 aa20.58■□□□□ 0.89
NCKIPSD-207ENST00000453349 MST1RQ04912 1400 aa20.58■□□□□ 0.88
NCKIPSD-207ENST00000453349 SLC24A1O60721 1099 aa20.57■□□□□ 0.88
NCKIPSD-207ENST00000453349 CDK19Q9BWU1 502 aa20.57■□□□□ 0.88
NCKIPSD-207ENST00000453349 ST20-MTHFSA0A0A6YYL1 179 aa20.56■□□□□ 0.88
NCKIPSD-207ENST00000453349 QRICH2Q9H0J4 1663 aa20.56■□□□□ 0.88
NCKIPSD-207ENST00000453349 USP47Q96K76 1375 aa20.56■□□□□ 0.88
NCKIPSD-207ENST00000453349 C1orf167Q5SNV9 1468 aa20.56■□□□□ 0.88
NCKIPSD-207ENST00000453349 EVC2Q86UK5 1308 aa20.55■□□□□ 0.88
NCKIPSD-207ENST00000453349 ADGRB2O60241 1585 aa20.55■□□□□ 0.88
NCKIPSD-207ENST00000453349 ESCO1Q5FWF5 840 aa20.55■□□□□ 0.88
NCKIPSD-207ENST00000453349 SRPK2P78362 688 aaKnown RBP20.54■□□□□ 0.88
NCKIPSD-207ENST00000453349 ZEB1P37275 1124 aaPredicted RBP20.53■□□□□ 0.88
NCKIPSD-207ENST00000453349 EIF4G2P78344 907 aaKnown RBP eCLIP20.53■□□□□ 0.88
NCKIPSD-207ENST00000453349 BRINP3Q76B58 766 aa20.53■□□□□ 0.88
NCKIPSD-207ENST00000453349 ORAI2Q96SN7 254 aa20.53■□□□□ 0.88
NCKIPSD-207ENST00000453349 FMN2Q9NZ56 1722 aa20.53■□□□□ 0.88
NCKIPSD-207ENST00000453349 ILDR1Q86SU0 546 aaPredicted RBP20.52■□□□□ 0.88
NCKIPSD-207ENST00000453349 ROBO1Q9Y6N7 1651 aa20.51■□□□□ 0.87
NCKIPSD-207ENST00000453349 SBNO2Q9Y2G9 1366 aa20.5■□□□□ 0.87
NCKIPSD-207ENST00000453349 NUDT16Q96DE0 195 aaKnown RBP20.5■□□□□ 0.87
NCKIPSD-207ENST00000453349 ANKARQ7Z5J8 1434 aa20.5■□□□□ 0.87
NCKIPSD-207ENST00000453349 CABP2Q9NPB3 220 aa20.49■□□□□ 0.87
NCKIPSD-207ENST00000453349 TULP4Q9NRJ4 1543 aa20.48■□□□□ 0.87
NCKIPSD-207ENST00000453349 PHF8Q9UPP1 1060 aa20.48■□□□□ 0.87
NCKIPSD-207ENST00000453349 HSPA5P11021 654 aaKnown RBP20.47■□□□□ 0.87
NCKIPSD-207ENST00000453349 TMF1P82094 1093 aa20.47■□□□□ 0.87
NCKIPSD-207ENST00000453349 TESK2Q96S53 571 aa20.47■□□□□ 0.87
NCKIPSD-207ENST00000453349 CCDC61Q9Y6R9 512 aa20.47■□□□□ 0.87
NCKIPSD-207ENST00000453349 HSPA1LP34931 641 aa20.46■□□□□ 0.87
NCKIPSD-207ENST00000453349 PRR36Q9H6K5 1346 aa20.46■□□□□ 0.87
NCKIPSD-207ENST00000453349 PMFBP1Q8TBY8 1022 aa20.45■□□□□ 0.86
NCKIPSD-207ENST00000453349 RGPD8O14715 1765 aaPredicted RBP20.44■□□□□ 0.86
NCKIPSD-207ENST00000453349 FOXO3O43524 673 aa20.44■□□□□ 0.86
NCKIPSD-207ENST00000453349 USP32Q8NFA0 1604 aa20.43■□□□□ 0.86
NCKIPSD-207ENST00000453349 CDCA8Q53HL2 280 aa20.43■□□□□ 0.86
NCKIPSD-207ENST00000453349 PUS7Q96PZ0 661 aaKnown RBP20.43■□□□□ 0.86
NCKIPSD-207ENST00000453349 NPHP3Q7Z494 1330 aa20.43■□□□□ 0.86
NCKIPSD-207ENST00000453349 PSME1Q06323 249 aa20.42■□□□□ 0.86
NCKIPSD-207ENST00000453349 NGDNQ8NEJ9 315 aaKnown RBP20.42■□□□□ 0.86
NCKIPSD-207ENST00000453349 DDX17Q92841 729 aaKnown RBP20.42■□□□□ 0.86
NCKIPSD-207ENST00000453349 ATAD2Q6PL18 1390 aa20.41■□□□□ 0.86
NCKIPSD-207ENST00000453349 ATP7BP35670 1465 aa20.41■□□□□ 0.86
NCKIPSD-207ENST00000453349 KIF1AQ12756 1690 aa20.41■□□□□ 0.86
NCKIPSD-207ENST00000453349 PHLPP1O60346 1717 aa20.41■□□□□ 0.86
NCKIPSD-207ENST00000453349 PLEKHG3A1L390 1219 aa20.4■□□□□ 0.86
NCKIPSD-207ENST00000453349 CABP1Q9NZU7 370 aa20.4■□□□□ 0.86
NCKIPSD-207ENST00000453349 ITSN1Q15811 1721 aa20.39■□□□□ 0.86
NCKIPSD-207ENST00000453349 AHDC1Q5TGY3 1603 aaPredicted RBP20.39■□□□□ 0.86
NCKIPSD-207ENST00000453349 KRT28Q7Z3Y7 464 aa20.39■□□□□ 0.85
NCKIPSD-207ENST00000453349 LRRC59Q96AG4 307 aaKnown RBP20.39■□□□□ 0.85
NCKIPSD-207ENST00000453349 PPIP5K1Q6PFW1 1433 aa20.38■□□□□ 0.85
NCKIPSD-207ENST00000453349 ACEP12821 1306 aa20.37■□□□□ 0.85
NCKIPSD-207ENST00000453349 TMC1Q8TDI8 760 aa20.37■□□□□ 0.85
NCKIPSD-207ENST00000453349 NHSL1Q5SYE7 1610 aa20.37■□□□□ 0.85
NCKIPSD-207ENST00000453349 SOS2Q07890 1332 aaPredicted RBP20.36■□□□□ 0.85
NCKIPSD-207ENST00000453349 XPCQ01831 940 aaPredicted RBP20.36■□□□□ 0.85
NCKIPSD-207ENST00000453349 DISP3Q9P2K9 1392 aa20.35■□□□□ 0.85
NCKIPSD-207ENST00000453349 ZNF692Q9BU19 519 aaPredicted RBP20.34■□□□□ 0.85
NCKIPSD-207ENST00000453349 TOPAZ1Q8N9V7 1692 aa20.34■□□□□ 0.85
NCKIPSD-207ENST00000453349 POLR3AO14802 1390 aaPredicted RBP20.33■□□□□ 0.84
NCKIPSD-207ENST00000453349 POLR3GLQ9BT43 218 aa20.32■□□□□ 0.84
NCKIPSD-207ENST00000453349 SLC12A5Q9H2X9 1139 aa20.32■□□□□ 0.84
NCKIPSD-207ENST00000453349 COL16A1Q07092 1604 aaPredicted RBP20.31■□□□□ 0.84
NCKIPSD-207ENST00000453349 PAK3O75914 559 aaPredicted RBP20.31■□□□□ 0.84
NCKIPSD-207ENST00000453349 PXDNQ92626 1479 aa20.3■□□□□ 0.84
NCKIPSD-207ENST00000453349 HDGFL2Q7Z4V5 671 aaPredicted RBP20.3■□□□□ 0.84
NCKIPSD-207ENST00000453349 TERF2IPQ9NYB0 399 aa20.3■□□□□ 0.84
NCKIPSD-207ENST00000453349 JCADQ9P266 1359 aa20.3■□□□□ 0.84
NCKIPSD-207ENST00000453349 NINLQ9Y2I6 1382 aa20.3■□□□□ 0.84
NCKIPSD-207ENST00000453349 SBNO1A3KN83 1393 aa20.29■□□□□ 0.84
NCKIPSD-207ENST00000453349 LMOD2Q6P5Q4 547 aa20.28■□□□□ 0.84
NCKIPSD-207ENST00000453349 SPATA31A3Q5VYP0 1347 aa20.27■□□□□ 0.84
NCKIPSD-207ENST00000453349 BRD4O60885 1362 aaPredicted RBP20.25■□□□□ 0.83
NCKIPSD-207ENST00000453349 KTN1Q86UP2 1357 aaKnown RBP20.25■□□□□ 0.83
NCKIPSD-207ENST00000453349 C11orf95C9JLR9 678 aaPredicted RBP20.25■□□□□ 0.83
NCKIPSD-207ENST00000453349 CPSF1Q10570 1443 aaKnown RBP20.24■□□□□ 0.83
NCKIPSD-207ENST00000453349 TNS3Q68CZ2 1445 aa20.24■□□□□ 0.83
NCKIPSD-207ENST00000453349 SPATA31A6Q5VVP1 1343 aa20.24■□□□□ 0.83
NCKIPSD-207ENST00000453349 USP6P35125 1406 aa20.23■□□□□ 0.83
NCKIPSD-207ENST00000453349 ARHGEF10O15013 1369 aa20.22■□□□□ 0.83
NCKIPSD-207ENST00000453349 PNPLA6Q8IY17 1366 aa20.22■□□□□ 0.83
NCKIPSD-207ENST00000453349 ABTB2Q8N961 1025 aa20.22■□□□□ 0.83
NCKIPSD-207ENST00000453349 NUTM2BA6NNL0 878 aaPredicted RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms