RNA–Protein interactions for RNA: ENST00000451980.3

LINC01548-201, Transcript of long intergenic non-protein coding RNA 1548, humanhuman

TSL 5 BASIC

Gene LINC01548, Length 696 nt, Biotype lincRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548-201ENST00000451980 HCSTQ9UBK5 93 aa12.34□□□□□ -0.43
LINC01548-201ENST00000451980 YEATS2Q9ULM3 1422 aa12.34□□□□□ -0.43
LINC01548-201ENST00000451980 SIGLEC1Q9BZZ2 1709 aa12.34□□□□□ -0.43
LINC01548-201ENST00000451980 MAGI2Q86UL8 1455 aa12.34□□□□□ -0.43
LINC01548-201ENST00000451980 MROH1Q8NDA8 1641 aa12.33□□□□□ -0.43
LINC01548-201ENST00000451980 POTEEQ6S8J3 1075 aa12.33□□□□□ -0.44
LINC01548-201ENST00000451980 PCDHGA4Q9Y5G9 962 aa12.33□□□□□ -0.44
LINC01548-201ENST00000451980 STK24Q9Y6E0 443 aa12.33□□□□□ -0.44
LINC01548-201ENST00000451980 ERBINQ96RT1 1412 aa12.33□□□□□ -0.44
LINC01548-201ENST00000451980 DEPDC5O75140 1603 aa12.33□□□□□ -0.44
LINC01548-201ENST00000451980 BCORL1Q5H9F3 1711 aa12.32□□□□□ -0.44
LINC01548-201ENST00000451980 PLA2G2EQ9NZK7 142 aa12.32□□□□□ -0.44
LINC01548-201ENST00000451980 EIF2AK4Q9P2K8 1649 aaKnown RBP12.31□□□□□ -0.44
LINC01548-201ENST00000451980 CCER1Q8TC90 406 aaPredicted RBP12.31□□□□□ -0.44
LINC01548-201ENST00000451980 DHX29Q7Z478 1369 aaKnown RBP12.3□□□□□ -0.44
LINC01548-201ENST00000451980 A2MP01023 1474 aa12.3□□□□□ -0.44
LINC01548-201ENST00000451980 AXIN2Q9Y2T1 843 aa12.3□□□□□ -0.44
LINC01548-201ENST00000451980 VWDEQ8N2E2 1590 aa12.3□□□□□ -0.44
LINC01548-201ENST00000451980 PSDA5PKW4 1024 aaPredicted RBP12.29□□□□□ -0.44
LINC01548-201ENST00000451980 IQGAP3Q86VI3 1631 aa12.29□□□□□ -0.44
LINC01548-201ENST00000451980 RNF17Q9BXT8 1623 aaKnown RBP12.29□□□□□ -0.44
LINC01548-201ENST00000451980 TMC2Q8TDI7 906 aa12.27□□□□□ -0.45
LINC01548-201ENST00000451980 MPHOSPH9Q99550 1183 aa12.27□□□□□ -0.45
LINC01548-201ENST00000451980 PRDM15P57071 1507 aaPredicted RBP12.27□□□□□ -0.45
LINC01548-201ENST00000451980 ARHGEF40Q8TER5 1519 aa12.27□□□□□ -0.45
LINC01548-201ENST00000451980 FAM135AQ9P2D6 1515 aa12.27□□□□□ -0.45
LINC01548-201ENST00000451980 REREQ9P2R6 1566 aa12.26□□□□□ -0.45
LINC01548-201ENST00000451980 ARHGAP33O14559 1287 aa12.26□□□□□ -0.45
LINC01548-201ENST00000451980 ADGRD1Q6QNK2 874 aa12.26□□□□□ -0.45
LINC01548-201ENST00000451980 TRIM52Q96A61 297 aa12.25□□□□□ -0.45
LINC01548-201ENST00000451980 CLSPNQ9HAW4 1339 aa12.25□□□□□ -0.45
LINC01548-201ENST00000451980 NUP155O75694 1391 aa12.25□□□□□ -0.45
LINC01548-201ENST00000451980 STK25O00506 426 aa12.24□□□□□ -0.45
LINC01548-201ENST00000451980 ATP10AO60312 1499 aa12.23□□□□□ -0.45
LINC01548-201ENST00000451980 ANKRD30BQ9BXX2 1392 aa12.23□□□□□ -0.45
LINC01548-201ENST00000451980 CEP152O94986 1710 aa12.23□□□□□ -0.45
LINC01548-201ENST00000451980 TK2O00142 265 aa12.22□□□□□ -0.45
LINC01548-201ENST00000451980 SIN3AQ96ST3 1273 aa12.22□□□□□ -0.45
LINC01548-201ENST00000451980 E9PCH4 1651 aa12.22□□□□□ -0.45
LINC01548-201ENST00000451980 AGLP35573 1532 aa12.21□□□□□ -0.45
LINC01548-201ENST00000451980 ACIN1Q9UKV3 1341 aaKnown RBP12.21□□□□□ -0.45
LINC01548-201ENST00000451980 KIF3BO15066 747 aa12.21□□□□□ -0.45
LINC01548-201ENST00000451980 TET3O43151 1660 aa12.21□□□□□ -0.45
LINC01548-201ENST00000451980 PLA2R1Q13018 1463 aa12.21□□□□□ -0.46
LINC01548-201ENST00000451980 LMTK2Q8IWU2 1503 aa12.2□□□□□ -0.46
LINC01548-201ENST00000451980 PKD2Q13563 968 aa12.19□□□□□ -0.46
LINC01548-201ENST00000451980 ABCC3O15438 1527 aa12.18□□□□□ -0.46
LINC01548-201ENST00000451980 KDM4FA0A1W2PPD8 638 aa12.18□□□□□ -0.46
LINC01548-201ENST00000451980 CFAP65Q6ZU64 1925 aaKnown RBP12.17□□□□□ -0.46
LINC01548-201ENST00000451980 HRO43593 1189 aa12.16□□□□□ -0.46
LINC01548-201ENST00000451980 ZEB1P37275 1124 aaPredicted RBP12.16□□□□□ -0.46
LINC01548-201ENST00000451980 PTCD2Q8WV60 388 aaKnown RBP12.16□□□□□ -0.46
LINC01548-201ENST00000451980 EFCAB6Q5THR3 1501 aa12.16□□□□□ -0.46
LINC01548-201ENST00000451980 CAMSAP1Q5T5Y3 1602 aa12.15□□□□□ -0.46
LINC01548-201ENST00000451980 SPHKAPQ2M3C7 1700 aa12.14□□□□□ -0.47
LINC01548-201ENST00000451980 PTPRTO14522 1441 aa12.14□□□□□ -0.47
LINC01548-201ENST00000451980 RPRD2Q5VT52 1461 aaKnown RBP12.14□□□□□ -0.47
LINC01548-201ENST00000451980 ZC3H13Q5T200 1668 aaKnown RBP12.13□□□□□ -0.47
LINC01548-201ENST00000451980 GGT6Q6P531 493 aa12.12□□□□□ -0.47
LINC01548-201ENST00000451980 NPATQ14207 1427 aa12.11□□□□□ -0.47
LINC01548-201ENST00000451980 CLTCQ00610 1675 aaKnown RBP12.11□□□□□ -0.47
LINC01548-201ENST00000451980 NEUROD1Q13562 356 aa12.11□□□□□ -0.47
LINC01548-201ENST00000451980 DMRTA1Q5VZB9 504 aa12.11□□□□□ -0.47
LINC01548-201ENST00000451980 CLTCL1P53675 1640 aa12.11□□□□□ -0.47
LINC01548-201ENST00000451980 TRPM2O94759 1503 aa12.11□□□□□ -0.47
LINC01548-201ENST00000451980 KANK1Q14678 1352 aa12.1□□□□□ -0.47
LINC01548-201ENST00000451980 ECM2O94769 699 aaPredicted RBP12.1□□□□□ -0.47
LINC01548-201ENST00000451980 PSEN2P49810 448 aa12.09□□□□□ -0.47
LINC01548-201ENST00000451980 PPP4R3BQ5MIZ7 849 aa12.09□□□□□ -0.47
LINC01548-201ENST00000451980 ARHGAP31Q2M1Z3 1444 aa12.09□□□□□ -0.47
LINC01548-201ENST00000451980 SYNMO15061 1565 aa12.09□□□□□ -0.47
LINC01548-201ENST00000451980 UGGT1Q9NYU2 1555 aa12.09□□□□□ -0.47
LINC01548-201ENST00000451980 PREX1Q8TCU6 1659 aa12.07□□□□□ -0.48
LINC01548-201ENST00000451980 PPP1R37O75864 691 aa12.07□□□□□ -0.48
LINC01548-201ENST00000451980 NOS1P29475 1434 aa12.07□□□□□ -0.48
LINC01548-201ENST00000451980 FOXK1P85037 733 aa12.07□□□□□ -0.48
LINC01548-201ENST00000451980 STAC3Q96MF2 364 aa12.07□□□□□ -0.48
LINC01548-201ENST00000451980 PIK3C2BO00750 1634 aa12.07□□□□□ -0.48
LINC01548-201ENST00000451980 KCTD12Q96CX2 325 aaKnown RBP12.06□□□□□ -0.48
LINC01548-201ENST00000451980 WASHC2CQ9Y4E1 1318 aa12.06□□□□□ -0.48
LINC01548-201ENST00000451980 SPATA31E1Q6ZUB1 1445 aa12.05□□□□□ -0.48
LINC01548-201ENST00000451980 TBC1D12O60347 775 aa12.05□□□□□ -0.48
LINC01548-201ENST00000451980 PPP1R15AO75807 674 aaPredicted RBP12.05□□□□□ -0.48
LINC01548-201ENST00000451980 TIMELESSQ9UNS1 1208 aa12.05□□□□□ -0.48
LINC01548-201ENST00000451980 MROH2AA6NES4 1674 aa12.05□□□□□ -0.48
LINC01548-201ENST00000451980 MLECQ14165 292 aa12.04□□□□□ -0.48
LINC01548-201ENST00000451980 L3MBTL2Q969R5 705 aa12.04□□□□□ -0.48
LINC01548-201ENST00000451980 PLPP6Q8IY26 295 aa12.03□□□□□ -0.48
LINC01548-201ENST00000451980 CCDC144AA2RUR9 1427 aa12.03□□□□□ -0.48
LINC01548-201ENST00000451980 FER1L4A9Z1Z3 1794 aa12.02□□□□□ -0.48
LINC01548-201ENST00000451980 ERVK-7P63135 1459 aa12.02□□□□□ -0.48
LINC01548-201ENST00000451980 KIF1BO60333 1816 aa12.02□□□□□ -0.48
LINC01548-201ENST00000451980 MYO5BQ9ULV0 1848 aa12.02□□□□□ -0.48
LINC01548-201ENST00000451980 SPATA31D1Q6ZQQ2 1576 aa12.02□□□□□ -0.49
LINC01548-201ENST00000451980 NEURL4Q96JN8 1562 aa12.02□□□□□ -0.49
LINC01548-201ENST00000451980 RGS20O76081 388 aa12.02□□□□□ -0.49
LINC01548-201ENST00000451980 ADAMTSL3P82987 1691 aa12.02□□□□□ -0.49
LINC01548-201ENST00000451980 TONSLQ96HA7 1378 aa12.02□□□□□ -0.49
LINC01548-201ENST00000451980 CNTLNQ9NXG0 1405 aa12.02□□□□□ -0.49
LINC01548-201ENST00000451980 IFT172Q9UG01 1749 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms