RNA–Protein interactions for RNA: ENST00000450501.5

COPS7B-215, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 4

Gene COPS7B, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-215ENST00000450501 ROBO1Q9Y6N7 1651 aa26.92■■□□□ 1.9
COPS7B-215ENST00000450501 POGKQ9P215 609 aa26.91■■□□□ 1.9
COPS7B-215ENST00000450501 TRPM1Q7Z4N2 1603 aa26.9■■□□□ 1.9
COPS7B-215ENST00000450501 NBPF1Q3BBV0 1214 aa26.9■■□□□ 1.9
COPS7B-215ENST00000450501 PRAM1Q96QH2 718 aa26.9■■□□□ 1.9
COPS7B-215ENST00000450501 CDC42BPGQ6DT37 1551 aa26.88■■□□□ 1.89
COPS7B-215ENST00000450501 MST1RQ04912 1400 aa26.88■■□□□ 1.89
COPS7B-215ENST00000450501 ARHGEF28Q8N1W1 1705 aaKnown RBP26.87■■□□□ 1.89
COPS7B-215ENST00000450501 HSPA1LP34931 641 aa26.86■■□□□ 1.89
COPS7B-215ENST00000450501 SAFB2Q14151 953 aaKnown RBP eCLIP26.85■■□□□ 1.89
COPS7B-215ENST00000450501 NBPF8Q3BBV2 869 aa26.85■■□□□ 1.89
COPS7B-215ENST00000450501 TIMELESSQ9UNS1 1208 aa26.83■■□□□ 1.89
COPS7B-215ENST00000450501 ROCK2O75116 1388 aaKnown RBP26.83■■□□□ 1.88
COPS7B-215ENST00000450501 C1orf167Q5SNV9 1468 aa26.81■■□□□ 1.88
COPS7B-215ENST00000450501 BRINP3Q76B58 766 aa26.79■■□□□ 1.88
COPS7B-215ENST00000450501 ADGRB2O60241 1585 aa26.79■■□□□ 1.88
COPS7B-215ENST00000450501 FMN2Q9NZ56 1722 aa26.79■■□□□ 1.88
COPS7B-215ENST00000450501 RALGAPBQ86X10 1494 aa26.76■■□□□ 1.87
COPS7B-215ENST00000450501 GPRASP1Q5JY77 1395 aa26.76■■□□□ 1.87
COPS7B-215ENST00000450501 MINK1Q8N4C8 1332 aaPredicted RBP26.76■■□□□ 1.87
COPS7B-215ENST00000450501 PHLPP1O60346 1717 aa26.76■■□□□ 1.87
COPS7B-215ENST00000450501 AHDC1Q5TGY3 1603 aaPredicted RBP26.74■■□□□ 1.87
COPS7B-215ENST00000450501 HIRIP3Q9BW71 556 aaPredicted RBP26.73■■□□□ 1.87
COPS7B-215ENST00000450501 CENPJQ9HC77 1338 aaPredicted RBP26.72■■□□□ 1.87
COPS7B-215ENST00000450501 NUTM2FA1L443 756 aa26.71■■□□□ 1.87
COPS7B-215ENST00000450501 ORAI2Q96SN7 254 aa26.71■■□□□ 1.87
COPS7B-215ENST00000450501 CARD11Q9BXL7 1154 aa26.71■■□□□ 1.87
COPS7B-215ENST00000450501 EIF3AQ14152 1382 aaKnown RBP26.71■■□□□ 1.87
COPS7B-215ENST00000450501 NHSL1Q5SYE7 1610 aa26.7■■□□□ 1.86
COPS7B-215ENST00000450501 ESCO1Q5FWF5 840 aa26.7■■□□□ 1.86
COPS7B-215ENST00000450501 WASLO00401 505 aaPredicted RBP26.69■■□□□ 1.86
COPS7B-215ENST00000450501 QRICH2Q9H0J4 1663 aa26.69■■□□□ 1.86
COPS7B-215ENST00000450501 RGPD8O14715 1765 aaPredicted RBP26.68■■□□□ 1.86
COPS7B-215ENST00000450501 COL16A1Q07092 1604 aaPredicted RBP26.68■■□□□ 1.86
COPS7B-215ENST00000450501 ANKARQ7Z5J8 1434 aa26.67■■□□□ 1.86
COPS7B-215ENST00000450501 TULP4Q9NRJ4 1543 aa26.65■■□□□ 1.86
COPS7B-215ENST00000450501 KIF1AQ12756 1690 aa26.64■■□□□ 1.86
COPS7B-215ENST00000450501 USP32Q8NFA0 1604 aa26.63■■□□□ 1.85
COPS7B-215ENST00000450501 DDX17Q92841 729 aaKnown RBP26.61■■□□□ 1.85
COPS7B-215ENST00000450501 CDK19Q9BWU1 502 aa26.61■■□□□ 1.85
COPS7B-215ENST00000450501 NPHP3Q7Z494 1330 aa26.61■■□□□ 1.85
COPS7B-215ENST00000450501 PHF8Q9UPP1 1060 aa26.6■■□□□ 1.85
COPS7B-215ENST00000450501 JCADQ9P266 1359 aa26.59■■□□□ 1.85
COPS7B-215ENST00000450501 FOXO3O43524 673 aa26.58■■□□□ 1.85
COPS7B-215ENST00000450501 LRRC59Q96AG4 307 aaKnown RBP26.58■■□□□ 1.85
COPS7B-215ENST00000450501 ITSN1Q15811 1721 aa26.58■■□□□ 1.85
COPS7B-215ENST00000450501 PRR36Q9H6K5 1346 aa26.58■■□□□ 1.85
COPS7B-215ENST00000450501 SOS2Q07890 1332 aaPredicted RBP26.57■■□□□ 1.84
COPS7B-215ENST00000450501 ATP7BP35670 1465 aa26.56■■□□□ 1.84
COPS7B-215ENST00000450501 NUDT16Q96DE0 195 aaKnown RBP26.56■■□□□ 1.84
COPS7B-215ENST00000450501 EVC2Q86UK5 1308 aa26.55■■□□□ 1.84
COPS7B-215ENST00000450501 SBNO2Q9Y2G9 1366 aa26.55■■□□□ 1.84
COPS7B-215ENST00000450501 SHPRHQ149N8 1683 aa26.54■■□□□ 1.84
COPS7B-215ENST00000450501 SRPK2P78362 688 aaKnown RBP26.54■■□□□ 1.84
COPS7B-215ENST00000450501 PMFBP1Q8TBY8 1022 aa26.52■■□□□ 1.84
COPS7B-215ENST00000450501 PXDNQ92626 1479 aa26.52■■□□□ 1.84
COPS7B-215ENST00000450501 CCDC61Q9Y6R9 512 aa26.51■■□□□ 1.83
COPS7B-215ENST00000450501 TOPAZ1Q8N9V7 1692 aa26.5■■□□□ 1.83
COPS7B-215ENST00000450501 MED1Q15648 1581 aaPredicted RBP26.5■■□□□ 1.83
COPS7B-215ENST00000450501 XPCQ01831 940 aaPredicted RBP26.49■■□□□ 1.83
COPS7B-215ENST00000450501 CABP2Q9NPB3 220 aa26.49■■□□□ 1.83
COPS7B-215ENST00000450501 USP47Q96K76 1375 aa26.48■■□□□ 1.83
COPS7B-215ENST00000450501 SPATA31A6Q5VVP1 1343 aa26.48■■□□□ 1.83
COPS7B-215ENST00000450501 PSME1Q06323 249 aa26.48■■□□□ 1.83
COPS7B-215ENST00000450501 KRT28Q7Z3Y7 464 aa26.48■■□□□ 1.83
COPS7B-215ENST00000450501 ST20-MTHFSA0A0A6YYL1 179 aa26.47■■□□□ 1.83
COPS7B-215ENST00000450501 PIAS4Q8N2W9 510 aaPredicted RBP26.47■■□□□ 1.83
COPS7B-215ENST00000450501 NGDNQ8NEJ9 315 aaKnown RBP26.47■■□□□ 1.83
COPS7B-215ENST00000450501 PNPLA6Q8IY17 1366 aa26.46■■□□□ 1.83
COPS7B-215ENST00000450501 SLC24A1O60721 1099 aa26.45■■□□□ 1.82
COPS7B-215ENST00000450501 ADRA2BP18089 450 aa26.45■■□□□ 1.82
COPS7B-215ENST00000450501 PPIP5K1Q6PFW1 1433 aa26.43■■□□□ 1.82
COPS7B-215ENST00000450501 PLEKHG3A1L390 1219 aa26.43■■□□□ 1.82
COPS7B-215ENST00000450501 SBNO1A3KN83 1393 aa26.42■■□□□ 1.82
COPS7B-215ENST00000450501 TESK2Q96S53 571 aa26.41■■□□□ 1.82
COPS7B-215ENST00000450501 POLR3AO14802 1390 aaPredicted RBP26.41■■□□□ 1.82
COPS7B-215ENST00000450501 ATAD2Q6PL18 1390 aa26.41■■□□□ 1.82
COPS7B-215ENST00000450501 SPATA31A3Q5VYP0 1347 aa26.4■■□□□ 1.82
COPS7B-215ENST00000450501 ACEP12821 1306 aa26.39■■□□□ 1.82
COPS7B-215ENST00000450501 TNS3Q68CZ2 1445 aa26.39■■□□□ 1.82
COPS7B-215ENST00000450501 COL22A1Q8NFW1 1626 aaPredicted RBP26.39■■□□□ 1.82
COPS7B-215ENST00000450501 DISP3Q9P2K9 1392 aa26.39■■□□□ 1.82
COPS7B-215ENST00000450501 TRPM3Q9HCF6 1732 aaPredicted RBP26.39■■□□□ 1.81
COPS7B-215ENST00000450501 NUTM2BA6NNL0 878 aaPredicted RBP26.37■■□□□ 1.81
COPS7B-215ENST00000450501 NUTM2EB1AL46 878 aaPredicted RBP26.37■■□□□ 1.81
COPS7B-215ENST00000450501 MSH5O43196 834 aa26.37■■□□□ 1.81
COPS7B-215ENST00000450501 NUTM2AQ8IVF1 878 aaPredicted RBP26.37■■□□□ 1.81
COPS7B-215ENST00000450501 CABP1Q9NZU7 370 aa26.37■■□□□ 1.81
COPS7B-215ENST00000450501 PUS7Q96PZ0 661 aaKnown RBP26.36■■□□□ 1.81
COPS7B-215ENST00000450501 LRP6O75581 1613 aa26.36■■□□□ 1.81
COPS7B-215ENST00000450501 ARHGEF10O15013 1369 aa26.35■■□□□ 1.81
COPS7B-215ENST00000450501 LMOD2Q6P5Q4 547 aa26.34■■□□□ 1.81
COPS7B-215ENST00000450501 TMF1P82094 1093 aa26.33■■□□□ 1.81
COPS7B-215ENST00000450501 MEX3CQ5U5Q3 659 aaKnown RBP26.33■■□□□ 1.81
COPS7B-215ENST00000450501 ALS2Q96Q42 1657 aa26.32■■□□□ 1.8
COPS7B-215ENST00000450501 PAK3O75914 559 aaPredicted RBP26.32■■□□□ 1.8
COPS7B-215ENST00000450501 EIF4G2P78344 907 aaKnown RBP eCLIP26.32■■□□□ 1.8
COPS7B-215ENST00000450501 BRD4O60885 1362 aaPredicted RBP26.29■■□□□ 1.8
COPS7B-215ENST00000450501 AKAP12Q02952 1782 aa26.28■■□□□ 1.8
COPS7B-215ENST00000450501 CDCA8Q53HL2 280 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms