RNA–Protein interactions for RNA: ENST00000450364.3

SMARCD2-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5

Gene SMARCD2, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-204ENST00000450364 YTHDC2Q9H6S0 1430 aaKnown RBP20.22■□□□□ 0.83
SMARCD2-204ENST00000450364 CFAP70Q5T0N1 1121 aa20.21■□□□□ 0.83
SMARCD2-204ENST00000450364 DHX57Q6P158 1386 aaKnown RBP20.21■□□□□ 0.83
SMARCD2-204ENST00000450364 ADGRB1O14514 1584 aa20.2■□□□□ 0.82
SMARCD2-204ENST00000450364 ORAI2Q96SN7 254 aa20.19■□□□□ 0.82
SMARCD2-204ENST00000450364 POTEAQ6S8J7 498 aa20.17■□□□□ 0.82
SMARCD2-204ENST00000450364 FMN2Q9NZ56 1722 aa20.16■□□□□ 0.82
SMARCD2-204ENST00000450364 SPATA31A6Q5VVP1 1343 aa20.15■□□□□ 0.82
SMARCD2-204ENST00000450364 PNPLA6Q8IY17 1366 aa20.12■□□□□ 0.81
SMARCD2-204ENST00000450364 DCAF11Q8TEB1 546 aa20.12■□□□□ 0.81
SMARCD2-204ENST00000450364 SIRT1Q96EB6 747 aa20.12■□□□□ 0.81
SMARCD2-204ENST00000450364 DLC1Q96QB1 1528 aa20.12■□□□□ 0.81
SMARCD2-204ENST00000450364 SOS2Q07890 1332 aaPredicted RBP20.11■□□□□ 0.81
SMARCD2-204ENST00000450364 KDM2AQ9Y2K7 1162 aa20.11■□□□□ 0.81
SMARCD2-204ENST00000450364 PXDNQ92626 1479 aa20.1■□□□□ 0.81
SMARCD2-204ENST00000450364 RGPD8O14715 1765 aaPredicted RBP20.09■□□□□ 0.81
SMARCD2-204ENST00000450364 NUTM2FA1L443 756 aa20.09■□□□□ 0.81
SMARCD2-204ENST00000450364 LRRC59Q96AG4 307 aaKnown RBP20.08■□□□□ 0.81
SMARCD2-204ENST00000450364 USP32Q8NFA0 1604 aa20.07■□□□□ 0.8
SMARCD2-204ENST00000450364 PRAM1Q96QH2 718 aa20.07■□□□□ 0.8
SMARCD2-204ENST00000450364 NUTM2BA6NNL0 878 aaPredicted RBP20.06■□□□□ 0.8
SMARCD2-204ENST00000450364 NUTM2EB1AL46 878 aaPredicted RBP20.06■□□□□ 0.8
SMARCD2-204ENST00000450364 ESCO1Q5FWF5 840 aa20.06■□□□□ 0.8
SMARCD2-204ENST00000450364 NUTM2AQ8IVF1 878 aaPredicted RBP20.06■□□□□ 0.8
SMARCD2-204ENST00000450364 COL22A1Q8NFW1 1626 aaPredicted RBP20.05■□□□□ 0.8
SMARCD2-204ENST00000450364 ADGRB2O60241 1585 aa20.05■□□□□ 0.8
SMARCD2-204ENST00000450364 SAFB2Q14151 953 aaKnown RBP eCLIP20.04■□□□□ 0.8
SMARCD2-204ENST00000450364 ARHGEF28Q8N1W1 1705 aaKnown RBP20.04■□□□□ 0.8
SMARCD2-204ENST00000450364 TRAK1Q9UPV9 953 aa20.03■□□□□ 0.8
SMARCD2-204ENST00000450364 XPCQ01831 940 aaPredicted RBP20.02■□□□□ 0.8
SMARCD2-204ENST00000450364 KIF1AQ12756 1690 aa20.02■□□□□ 0.8
SMARCD2-204ENST00000450364 FOXO3O43524 673 aa20.01■□□□□ 0.79
SMARCD2-204ENST00000450364 MEX3CQ5U5Q3 659 aaKnown RBP20.01■□□□□ 0.79
SMARCD2-204ENST00000450364 KIAA1210Q9ULL0 1709 aa20■□□□□ 0.79
SMARCD2-204ENST00000450364 STAC3Q96MF2 364 aa20■□□□□ 0.79
SMARCD2-204ENST00000450364 NPHP3Q7Z494 1330 aa20■□□□□ 0.79
SMARCD2-204ENST00000450364 AFF2P51816 1311 aa19.98■□□□□ 0.79
SMARCD2-204ENST00000450364 SIN3AQ96ST3 1273 aa19.97■□□□□ 0.79
SMARCD2-204ENST00000450364 HIRIP3Q9BW71 556 aaPredicted RBP19.97■□□□□ 0.79
SMARCD2-204ENST00000450364 POGKQ9P215 609 aa19.96■□□□□ 0.79
SMARCD2-204ENST00000450364 PRR36Q9H6K5 1346 aa19.96■□□□□ 0.79
SMARCD2-204ENST00000450364 NBPF1Q3BBV0 1214 aa19.95■□□□□ 0.78
SMARCD2-204ENST00000450364 MINK1Q8N4C8 1332 aaPredicted RBP19.95■□□□□ 0.78
SMARCD2-204ENST00000450364 ANKARQ7Z5J8 1434 aa19.94■□□□□ 0.78
SMARCD2-204ENST00000450364 ADAMTS2O95450 1211 aa19.94■□□□□ 0.78
SMARCD2-204ENST00000450364 ZNF772Q68DY9 489 aaPredicted RBP19.94■□□□□ 0.78
SMARCD2-204ENST00000450364 MARF1Q9Y4F3 1742 aaKnown RBP19.93■□□□□ 0.78
SMARCD2-204ENST00000450364 TULP4Q9NRJ4 1543 aa19.93■□□□□ 0.78
SMARCD2-204ENST00000450364 C8orf37Q96NL8 207 aa19.93■□□□□ 0.78
SMARCD2-204ENST00000450364 PHF8Q9UPP1 1060 aa19.93■□□□□ 0.78
SMARCD2-204ENST00000450364 SPATA31A3Q5VYP0 1347 aa19.93■□□□□ 0.78
SMARCD2-204ENST00000450364 L3MBTL2Q969R5 705 aa19.92■□□□□ 0.78
SMARCD2-204ENST00000450364 TRPM3Q9HCF6 1732 aaPredicted RBP19.91■□□□□ 0.78
SMARCD2-204ENST00000450364 KRT28Q7Z3Y7 464 aa19.91■□□□□ 0.78
SMARCD2-204ENST00000450364 WASLO00401 505 aaPredicted RBP19.89■□□□□ 0.77
SMARCD2-204ENST00000450364 PMFBP1Q8TBY8 1022 aa19.89■□□□□ 0.77
SMARCD2-204ENST00000450364 ABCA3Q99758 1704 aa19.89■□□□□ 0.77
SMARCD2-204ENST00000450364 ATP7BP35670 1465 aa19.88■□□□□ 0.77
SMARCD2-204ENST00000450364 TNS3Q68CZ2 1445 aa19.88■□□□□ 0.77
SMARCD2-204ENST00000450364 TRPM1Q7Z4N2 1603 aa19.87■□□□□ 0.77
SMARCD2-204ENST00000450364 FNBP4Q8N3X1 1017 aaPredicted RBP19.86■□□□□ 0.77
SMARCD2-204ENST00000450364 TOPAZ1Q8N9V7 1692 aa19.86■□□□□ 0.77
SMARCD2-204ENST00000450364 ALS2Q96Q42 1657 aa19.86■□□□□ 0.77
SMARCD2-204ENST00000450364 BCL9LQ86UU0 1499 aa19.86■□□□□ 0.77
SMARCD2-204ENST00000450364 CDK12Q9NYV4 1490 aaPredicted RBP19.86■□□□□ 0.77
SMARCD2-204ENST00000450364 SBNO1A3KN83 1393 aa19.85■□□□□ 0.77
SMARCD2-204ENST00000450364 RXRBP28702 533 aa19.85■□□□□ 0.77
SMARCD2-204ENST00000450364 NGLY1Q96IV0 654 aa19.85■□□□□ 0.77
SMARCD2-204ENST00000450364 RGS12O14924 1447 aa19.85■□□□□ 0.77
SMARCD2-204ENST00000450364 NEUROD1Q13562 356 aa19.84■□□□□ 0.77
SMARCD2-204ENST00000450364 QTRT2Q9H974 415 aaKnown RBP19.84■□□□□ 0.77
SMARCD2-204ENST00000450364 ATRNO75882 1429 aa19.83■□□□□ 0.76
SMARCD2-204ENST00000450364 ITSN1Q15811 1721 aa19.82■□□□□ 0.76
SMARCD2-204ENST00000450364 CRYBG1Q9Y4K1 1723 aa19.82■□□□□ 0.76
SMARCD2-204ENST00000450364 CABLES1Q8TDN4 633 aa19.82■□□□□ 0.76
SMARCD2-204ENST00000450364 EIF3AQ14152 1382 aaKnown RBP19.82■□□□□ 0.76
SMARCD2-204ENST00000450364 QRICH2Q9H0J4 1663 aa19.81■□□□□ 0.76
SMARCD2-204ENST00000450364 CDK19Q9BWU1 502 aa19.81■□□□□ 0.76
SMARCD2-204ENST00000450364 USP21Q9UK80 565 aa19.81■□□□□ 0.76
SMARCD2-204ENST00000450364 PSME1Q06323 249 aa19.8■□□□□ 0.76
SMARCD2-204ENST00000450364 NBPF8Q3BBV2 869 aa19.8■□□□□ 0.76
SMARCD2-204ENST00000450364 NUDT16Q96DE0 195 aaKnown RBP19.8■□□□□ 0.76
SMARCD2-204ENST00000450364 SLIT2O94813 1529 aa19.8■□□□□ 0.76
SMARCD2-204ENST00000450364 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.79■□□□□ 0.76
SMARCD2-204ENST00000450364 RBM6P78332 1123 aaKnown RBP19.79■□□□□ 0.76
SMARCD2-204ENST00000450364 TRIM26Q12899 539 aaPredicted RBP19.79■□□□□ 0.76
SMARCD2-204ENST00000450364 PLCH1Q4KWH8 1693 aa19.78■□□□□ 0.76
SMARCD2-204ENST00000450364 ARHGEF10O15013 1369 aa19.76■□□□□ 0.75
SMARCD2-204ENST00000450364 PLEKHG5O94827 1062 aa19.76■□□□□ 0.75
SMARCD2-204ENST00000450364 CENPJQ9HC77 1338 aaPredicted RBP19.76■□□□□ 0.75
SMARCD2-204ENST00000450364 GLI3P10071 1580 aa19.75■□□□□ 0.75
SMARCD2-204ENST00000450364 TRPC5Q9UL62 973 aaPredicted RBP19.75■□□□□ 0.75
SMARCD2-204ENST00000450364 POLR3AO14802 1390 aaPredicted RBP19.74■□□□□ 0.75
SMARCD2-204ENST00000450364 UPF1Q92900 1129 aaKnown RBP eCLIP19.74■□□□□ 0.75
SMARCD2-204ENST00000450364 EP400Q96L91 3159 aa19.73■□□□□ 0.75
SMARCD2-204ENST00000450364 GPRASP1Q5JY77 1395 aa19.73■□□□□ 0.75
SMARCD2-204ENST00000450364 LMOD2Q6P5Q4 547 aa19.73■□□□□ 0.75
SMARCD2-204ENST00000450364 NRAPQ86VF7 1730 aa19.72■□□□□ 0.75
SMARCD2-204ENST00000450364 NGDNQ8NEJ9 315 aaKnown RBP19.72■□□□□ 0.75
SMARCD2-204ENST00000450364 NWD2Q9ULI1 1742 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms