RNA–Protein interactions for RNA: ENST00000449811.5

CPSF7-207, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-207ENST00000449811 PRAG1Q86YV5 1406 aa20.92■□□□□ 0.94
CPSF7-207ENST00000449811 HFM1A2PYH4 1435 aa20.91■□□□□ 0.94
CPSF7-207ENST00000449811 VGFO15240 615 aaPredicted RBP20.91■□□□□ 0.94
CPSF7-207ENST00000449811 NPHP3Q7Z494 1330 aa20.91■□□□□ 0.94
CPSF7-207ENST00000449811 GJD4Q96KN9 370 aaPredicted RBP20.9■□□□□ 0.94
CPSF7-207ENST00000449811 KIF1BO60333 1816 aa20.9■□□□□ 0.94
CPSF7-207ENST00000449811 ESCO1Q5FWF5 840 aa20.89■□□□□ 0.93
CPSF7-207ENST00000449811 PXDNQ92626 1479 aa20.88■□□□□ 0.93
CPSF7-207ENST00000449811 MARF1Q9Y4F3 1742 aaKnown RBP20.85■□□□□ 0.93
CPSF7-207ENST00000449811 XPCQ01831 940 aaPredicted RBP20.85■□□□□ 0.93
CPSF7-207ENST00000449811 CDC42BPGQ6DT37 1551 aa20.85■□□□□ 0.93
CPSF7-207ENST00000449811 FOXO3O43524 673 aa20.84■□□□□ 0.93
CPSF7-207ENST00000449811 BLMP54132 1417 aaPredicted RBP20.84■□□□□ 0.93
CPSF7-207ENST00000449811 RPGRIP1LQ68CZ1 1315 aa20.83■□□□□ 0.93
CPSF7-207ENST00000449811 LRPPRCP42704 1394 aaKnown RBP20.83■□□□□ 0.92
CPSF7-207ENST00000449811 RALGAPBQ86X10 1494 aa20.81■□□□□ 0.92
CPSF7-207ENST00000449811 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.81■□□□□ 0.92
CPSF7-207ENST00000449811 UNC5CLQ8IV45 518 aa20.81■□□□□ 0.92
CPSF7-207ENST00000449811 GLI3P10071 1580 aa20.8■□□□□ 0.92
CPSF7-207ENST00000449811 SLIT2O94813 1529 aa20.79■□□□□ 0.92
CPSF7-207ENST00000449811 NAIPQ13075 1403 aa20.78■□□□□ 0.92
CPSF7-207ENST00000449811 NUTM2FA1L443 756 aa20.78■□□□□ 0.92
CPSF7-207ENST00000449811 DEFB132Q7Z7B7 95 aa20.78■□□□□ 0.92
CPSF7-207ENST00000449811 SF3B2Q13435 895 aaKnown RBP20.77■□□□□ 0.92
CPSF7-207ENST00000449811 PPLO60437 1756 aa20.77■□□□□ 0.91
CPSF7-207ENST00000449811 SPATA31A3Q5VYP0 1347 aa20.75■□□□□ 0.91
CPSF7-207ENST00000449811 PPARGC1BQ86YN6 1023 aaKnown RBP20.74■□□□□ 0.91
CPSF7-207ENST00000449811 WAPLQ7Z5K2 1190 aa20.73■□□□□ 0.91
CPSF7-207ENST00000449811 SEPT12Q8IYM1 358 aa20.73■□□□□ 0.91
CPSF7-207ENST00000449811 STK26Q9P289 416 aa20.73■□□□□ 0.91
CPSF7-207ENST00000449811 CCDC144AA2RUR9 1427 aa20.72■□□□□ 0.91
CPSF7-207ENST00000449811 TECPR2O15040 1411 aa20.72■□□□□ 0.91
CPSF7-207ENST00000449811 USP32Q8NFA0 1604 aa20.72■□□□□ 0.91
CPSF7-207ENST00000449811 BRWD3Q6RI45 1802 aa20.71■□□□□ 0.91
CPSF7-207ENST00000449811 LRP5O75197 1615 aa20.71■□□□□ 0.91
CPSF7-207ENST00000449811 HAP1P54257 671 aaPredicted RBP20.7■□□□□ 0.9
CPSF7-207ENST00000449811 SLC4A1APQ9BWU0 796 aaKnown RBP20.7■□□□□ 0.9
CPSF7-207ENST00000449811 ADGRF5Q8IZF2 1346 aa20.7■□□□□ 0.9
CPSF7-207ENST00000449811 VPS72Q15906 364 aa20.69■□□□□ 0.9
CPSF7-207ENST00000449811 KRT28Q7Z3Y7 464 aa20.69■□□□□ 0.9
CPSF7-207ENST00000449811 KIF1AQ12756 1690 aa20.69■□□□□ 0.9
CPSF7-207ENST00000449811 PLEKHH1Q9ULM0 1364 aa20.69■□□□□ 0.9
CPSF7-207ENST00000449811 RRBP1Q9P2E9 1410 aaKnown RBP20.69■□□□□ 0.9
CPSF7-207ENST00000449811 KRT27Q7Z3Y8 459 aa20.68■□□□□ 0.9
CPSF7-207ENST00000449811 CCDC9Q9Y3X0 531 aaKnown RBP20.68■□□□□ 0.9
CPSF7-207ENST00000449811 ABCC11Q96J66 1382 aa20.67■□□□□ 0.9
CPSF7-207ENST00000449811 FMN2Q9NZ56 1722 aa20.67■□□□□ 0.9
CPSF7-207ENST00000449811 ONECUT3O60422 494 aaPredicted RBP20.66■□□□□ 0.9
CPSF7-207ENST00000449811 TNS3Q68CZ2 1445 aa20.66■□□□□ 0.9
CPSF7-207ENST00000449811 TMEM132EQ6IEE7 984 aa20.65■□□□□ 0.9
CPSF7-207ENST00000449811 CABLES1Q8TDN4 633 aa20.65■□□□□ 0.9
CPSF7-207ENST00000449811 PSDA5PKW4 1024 aaPredicted RBP20.64■□□□□ 0.89
CPSF7-207ENST00000449811 PLEKHG5O94827 1062 aa20.64■□□□□ 0.89
CPSF7-207ENST00000449811 KNDC1Q76NI1 1749 aa20.64■□□□□ 0.89
CPSF7-207ENST00000449811 BAG6P46379 1132 aa20.63■□□□□ 0.89
CPSF7-207ENST00000449811 PSME1Q06323 249 aa20.63■□□□□ 0.89
CPSF7-207ENST00000449811 RGL3Q3MIN7 710 aa20.63■□□□□ 0.89
CPSF7-207ENST00000449811 PLCH1Q4KWH8 1693 aa20.63■□□□□ 0.89
CPSF7-207ENST00000449811 ANKRD30BQ9BXX2 1392 aa20.62■□□□□ 0.89
CPSF7-207ENST00000449811 NWD2Q9ULI1 1742 aa20.62■□□□□ 0.89
CPSF7-207ENST00000449811 A0A0G2JS52 829 aa20.62■□□□□ 0.89
CPSF7-207ENST00000449811 MYT1Q01538 1121 aa20.62■□□□□ 0.89
CPSF7-207ENST00000449811 PHF8Q9UPP1 1060 aa20.62■□□□□ 0.89
CPSF7-207ENST00000449811 HRCP23327 699 aa20.61■□□□□ 0.89
CPSF7-207ENST00000449811 LMOD2Q6P5Q4 547 aa20.61■□□□□ 0.89
CPSF7-207ENST00000449811 YTHDC2Q9H6S0 1430 aaKnown RBP20.6■□□□□ 0.89
CPSF7-207ENST00000449811 SBNO1A3KN83 1393 aa20.59■□□□□ 0.89
CPSF7-207ENST00000449811 PIK3C2GO75747 1445 aa20.59■□□□□ 0.89
CPSF7-207ENST00000449811 SPATA31E1Q6ZUB1 1445 aa20.59■□□□□ 0.89
CPSF7-207ENST00000449811 ARHGEF10O15013 1369 aa20.59■□□□□ 0.89
CPSF7-207ENST00000449811 FAM83GA6ND36 823 aa20.57■□□□□ 0.88
CPSF7-207ENST00000449811 ABCA3Q99758 1704 aa20.57■□□□□ 0.88
CPSF7-207ENST00000449811 NRXN1Q9ULB1 1477 aa20.56■□□□□ 0.88
CPSF7-207ENST00000449811 IFT172Q9UG01 1749 aa20.56■□□□□ 0.88
CPSF7-207ENST00000449811 FAM98CQ17RN3 349 aaKnown RBP20.56■□□□□ 0.88
CPSF7-207ENST00000449811 SIRT1Q96EB6 747 aa20.56■□□□□ 0.88
CPSF7-207ENST00000449811 RGPD8O14715 1765 aaPredicted RBP20.55■□□□□ 0.88
CPSF7-207ENST00000449811 EN1Q05925 392 aaPredicted RBP20.53■□□□□ 0.88
CPSF7-207ENST00000449811 BTG4Q9NY30 223 aa20.52■□□□□ 0.88
CPSF7-207ENST00000449811 NRAPQ86VF7 1730 aa20.52■□□□□ 0.88
CPSF7-207ENST00000449811 R3HDM1Q15032 1099 aaKnown RBP20.51■□□□□ 0.87
CPSF7-207ENST00000449811 SAFB2Q14151 953 aaKnown RBP eCLIP20.5■□□□□ 0.87
CPSF7-207ENST00000449811 PMFBP1Q8TBY8 1022 aa20.5■□□□□ 0.87
CPSF7-207ENST00000449811 RGPD1P0DJD0 1748 aa20.5■□□□□ 0.87
CPSF7-207ENST00000449811 FAM182BQ5T319 152 aa20.49■□□□□ 0.87
CPSF7-207ENST00000449811 PRAM1Q96QH2 718 aa20.49■□□□□ 0.87
CPSF7-207ENST00000449811 C14orf93Q9H972 538 aaKnown RBP20.49■□□□□ 0.87
CPSF7-207ENST00000449811 DHX57Q6P158 1386 aaKnown RBP20.48■□□□□ 0.87
CPSF7-207ENST00000449811 DISP2A7MBM2 1401 aa20.47■□□□□ 0.87
CPSF7-207ENST00000449811 ANKARQ7Z5J8 1434 aa20.47■□□□□ 0.87
CPSF7-207ENST00000449811 COL14A1Q05707 1796 aaKnown RBP20.46■□□□□ 0.87
CPSF7-207ENST00000449811 CFAP70Q5T0N1 1121 aa20.46■□□□□ 0.87
CPSF7-207ENST00000449811 SPATA31A5Q5VU36 1347 aa20.46■□□□□ 0.87
CPSF7-207ENST00000449811 SPATA31A7Q8IWB4 1347 aa20.46■□□□□ 0.87
CPSF7-207ENST00000449811 MPHOSPH9Q99550 1183 aa20.45■□□□□ 0.86
CPSF7-207ENST00000449811 EZH2Q15910 746 aaKnown RBP20.44■□□□□ 0.86
CPSF7-207ENST00000449811 GPRASP1Q5JY77 1395 aa20.44■□□□□ 0.86
CPSF7-207ENST00000449811 TRPM3Q9HCF6 1732 aaPredicted RBP20.44■□□□□ 0.86
CPSF7-207ENST00000449811 POGKQ9P215 609 aa20.43■□□□□ 0.86
CPSF7-207ENST00000449811 THSD7AQ9UPZ6 1657 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms