RNA–Protein interactions for RNA: ENST00000449472.1

CCDC197-203, Transcript of coiled-coil domain containing 197, humanhuman

TSL 3

Gene CCDC197, Length 477 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-203ENST00000449472 NUTM2FA1L443 756 aa16.96■□□□□ 0.31
CCDC197-203ENST00000449472 NUTM2BA6NNL0 878 aaPredicted RBP16.96■□□□□ 0.31
CCDC197-203ENST00000449472 NUTM2EB1AL46 878 aaPredicted RBP16.96■□□□□ 0.31
CCDC197-203ENST00000449472 NUTM2AQ8IVF1 878 aaPredicted RBP16.96■□□□□ 0.31
CCDC197-203ENST00000449472 NHSL1Q5SYE7 1610 aa16.96■□□□□ 0.3
CCDC197-203ENST00000449472 TECPR2O15040 1411 aa16.96■□□□□ 0.3
CCDC197-203ENST00000449472 LRP6O75581 1613 aa16.95■□□□□ 0.3
CCDC197-203ENST00000449472 MYOM2P54296 1465 aa16.94■□□□□ 0.3
CCDC197-203ENST00000449472 DHX57Q6P158 1386 aaKnown RBP16.94■□□□□ 0.3
CCDC197-203ENST00000449472 ESCO1Q5FWF5 840 aa16.94■□□□□ 0.3
CCDC197-203ENST00000449472 MEX3CQ5U5Q3 659 aaKnown RBP16.94■□□□□ 0.3
CCDC197-203ENST00000449472 SIRT1Q96EB6 747 aa16.94■□□□□ 0.3
CCDC197-203ENST00000449472 SHPRHQ149N8 1683 aa16.94■□□□□ 0.3
CCDC197-203ENST00000449472 SAFB2Q14151 953 aaKnown RBP eCLIP16.92■□□□□ 0.3
CCDC197-203ENST00000449472 KNDC1Q76NI1 1749 aa16.91■□□□□ 0.3
CCDC197-203ENST00000449472 SOS2Q07890 1332 aaPredicted RBP16.91■□□□□ 0.3
CCDC197-203ENST00000449472 FOXO3O43524 673 aa16.9■□□□□ 0.3
CCDC197-203ENST00000449472 PRAM1Q96QH2 718 aa16.9■□□□□ 0.3
CCDC197-203ENST00000449472 TRAK1Q9UPV9 953 aa16.89■□□□□ 0.29
CCDC197-203ENST00000449472 CDC42BPGQ6DT37 1551 aa16.89■□□□□ 0.29
CCDC197-203ENST00000449472 PNPLA6Q8IY17 1366 aa16.89■□□□□ 0.29
CCDC197-203ENST00000449472 XPCQ01831 940 aaPredicted RBP16.88■□□□□ 0.29
CCDC197-203ENST00000449472 POGKQ9P215 609 aa16.88■□□□□ 0.29
CCDC197-203ENST00000449472 STAC3Q96MF2 364 aa16.87■□□□□ 0.29
CCDC197-203ENST00000449472 LAMC1P11047 1609 aa16.87■□□□□ 0.29
CCDC197-203ENST00000449472 ADGRB1O14514 1584 aa16.85■□□□□ 0.29
CCDC197-203ENST00000449472 ADAMTS2O95450 1211 aa16.85■□□□□ 0.29
CCDC197-203ENST00000449472 ZNF772Q68DY9 489 aaPredicted RBP16.85■□□□□ 0.29
CCDC197-203ENST00000449472 RGPD8O14715 1765 aaPredicted RBP16.84■□□□□ 0.29
CCDC197-203ENST00000449472 C8orf37Q96NL8 207 aa16.84■□□□□ 0.29
CCDC197-203ENST00000449472 NPHP3Q7Z494 1330 aa16.84■□□□□ 0.29
CCDC197-203ENST00000449472 AFF2P51816 1311 aa16.83■□□□□ 0.28
CCDC197-203ENST00000449472 HIRIP3Q9BW71 556 aaPredicted RBP16.83■□□□□ 0.28
CCDC197-203ENST00000449472 FMN2Q9NZ56 1722 aa16.83■□□□□ 0.28
CCDC197-203ENST00000449472 DLC1Q96QB1 1528 aa16.81■□□□□ 0.28
CCDC197-203ENST00000449472 PXDNQ92626 1479 aa16.81■□□□□ 0.28
CCDC197-203ENST00000449472 MINK1Q8N4C8 1332 aaPredicted RBP16.81■□□□□ 0.28
CCDC197-203ENST00000449472 SIN3AQ96ST3 1273 aa16.81■□□□□ 0.28
CCDC197-203ENST00000449472 PHF8Q9UPP1 1060 aa16.81■□□□□ 0.28
CCDC197-203ENST00000449472 KRT28Q7Z3Y7 464 aa16.8■□□□□ 0.28
CCDC197-203ENST00000449472 NGLY1Q96IV0 654 aa16.8■□□□□ 0.28
CCDC197-203ENST00000449472 RXRBP28702 533 aa16.79■□□□□ 0.28
CCDC197-203ENST00000449472 NBPF1Q3BBV0 1214 aa16.79■□□□□ 0.28
CCDC197-203ENST00000449472 PMFBP1Q8TBY8 1022 aa16.78■□□□□ 0.28
CCDC197-203ENST00000449472 QTRT2Q9H974 415 aaKnown RBP16.78■□□□□ 0.28
CCDC197-203ENST00000449472 NEUROD1Q13562 356 aa16.77■□□□□ 0.28
CCDC197-203ENST00000449472 L3MBTL2Q969R5 705 aa16.77■□□□□ 0.28
CCDC197-203ENST00000449472 SPATA31A3Q5VYP0 1347 aa16.76■□□□□ 0.27
CCDC197-203ENST00000449472 WASLO00401 505 aaPredicted RBP16.76■□□□□ 0.27
CCDC197-203ENST00000449472 PSME1Q06323 249 aa16.76■□□□□ 0.27
CCDC197-203ENST00000449472 USP32Q8NFA0 1604 aa16.74■□□□□ 0.27
CCDC197-203ENST00000449472 COL22A1Q8NFW1 1626 aaPredicted RBP16.74■□□□□ 0.27
CCDC197-203ENST00000449472 PRR36Q9H6K5 1346 aa16.74■□□□□ 0.27
CCDC197-203ENST00000449472 PLEKHG5O94827 1062 aa16.74■□□□□ 0.27
CCDC197-203ENST00000449472 USP21Q9UK80 565 aa16.74■□□□□ 0.27
CCDC197-203ENST00000449472 KIF1AQ12756 1690 aa16.74■□□□□ 0.27
CCDC197-203ENST00000449472 FNBP4Q8N3X1 1017 aaPredicted RBP16.73■□□□□ 0.27
CCDC197-203ENST00000449472 LMOD2Q6P5Q4 547 aa16.72■□□□□ 0.27
CCDC197-203ENST00000449472 CABLES1Q8TDN4 633 aa16.72■□□□□ 0.27
CCDC197-203ENST00000449472 ADGRB2O60241 1585 aa16.72■□□□□ 0.27
CCDC197-203ENST00000449472 ANKARQ7Z5J8 1434 aa16.71■□□□□ 0.27
CCDC197-203ENST00000449472 ARHGEF28Q8N1W1 1705 aaKnown RBP16.71■□□□□ 0.27
CCDC197-203ENST00000449472 RBM6P78332 1123 aaKnown RBP16.71■□□□□ 0.27
CCDC197-203ENST00000449472 CDK19Q9BWU1 502 aa16.71■□□□□ 0.27
CCDC197-203ENST00000449472 KIAA1210Q9ULL0 1709 aa16.7■□□□□ 0.26
CCDC197-203ENST00000449472 NUDT16Q96DE0 195 aaKnown RBP16.7■□□□□ 0.26
CCDC197-203ENST00000449472 SBNO1A3KN83 1393 aa16.68■□□□□ 0.26
CCDC197-203ENST00000449472 NGDNQ8NEJ9 315 aaKnown RBP16.68■□□□□ 0.26
CCDC197-203ENST00000449472 TRPC5Q9UL62 973 aaPredicted RBP16.68■□□□□ 0.26
CCDC197-203ENST00000449472 TULP4Q9NRJ4 1543 aa16.67■□□□□ 0.26
CCDC197-203ENST00000449472 TRIM26Q12899 539 aaPredicted RBP16.67■□□□□ 0.26
CCDC197-203ENST00000449472 TNS3Q68CZ2 1445 aa16.67■□□□□ 0.26
CCDC197-203ENST00000449472 MARF1Q9Y4F3 1742 aaKnown RBP16.67■□□□□ 0.26
CCDC197-203ENST00000449472 BCL9LQ86UU0 1499 aa16.67■□□□□ 0.26
CCDC197-203ENST00000449472 EIF3AQ14152 1382 aaKnown RBP16.65■□□□□ 0.26
CCDC197-203ENST00000449472 HAP1P54257 671 aaPredicted RBP16.65■□□□□ 0.26
CCDC197-203ENST00000449472 UPF1Q92900 1129 aaKnown RBP eCLIP16.65■□□□□ 0.26
CCDC197-203ENST00000449472 GPRASP1Q5JY77 1395 aa16.64■□□□□ 0.26
CCDC197-203ENST00000449472 CDK12Q9NYV4 1490 aaPredicted RBP16.64■□□□□ 0.25
CCDC197-203ENST00000449472 RGS12O14924 1447 aa16.63■□□□□ 0.25
CCDC197-203ENST00000449472 PAK3O75914 559 aaPredicted RBP16.63■□□□□ 0.25
CCDC197-203ENST00000449472 CENPJQ9HC77 1338 aaPredicted RBP16.63■□□□□ 0.25
CCDC197-203ENST00000449472 ARHGEF10O15013 1369 aa16.63■□□□□ 0.25
CCDC197-203ENST00000449472 ATRNO75882 1429 aa16.62■□□□□ 0.25
CCDC197-203ENST00000449472 FAM83GA6ND36 823 aa16.62■□□□□ 0.25
CCDC197-203ENST00000449472 NBPF8Q3BBV2 869 aa16.62■□□□□ 0.25
CCDC197-203ENST00000449472 UNC5CLQ8IV45 518 aa16.62■□□□□ 0.25
CCDC197-203ENST00000449472 CABP2Q9NPB3 220 aa16.62■□□□□ 0.25
CCDC197-203ENST00000449472 CCDC61Q9Y6R9 512 aa16.62■□□□□ 0.25
CCDC197-203ENST00000449472 TRPM3Q9HCF6 1732 aaPredicted RBP16.62■□□□□ 0.25
CCDC197-203ENST00000449472 ATP7BP35670 1465 aa16.61■□□□□ 0.25
CCDC197-203ENST00000449472 GJD4Q96KN9 370 aaPredicted RBP16.61■□□□□ 0.25
CCDC197-203ENST00000449472 SRPK2P78362 688 aaKnown RBP16.6■□□□□ 0.25
CCDC197-203ENST00000449472 ACEP12821 1306 aa16.6■□□□□ 0.25
CCDC197-203ENST00000449472 SLIT2O94813 1529 aa16.6■□□□□ 0.25
CCDC197-203ENST00000449472 PLEKHG3A1L390 1219 aa16.59■□□□□ 0.25
CCDC197-203ENST00000449472 TRPM1Q7Z4N2 1603 aa16.58■□□□□ 0.24
CCDC197-203ENST00000449472 ALS2Q96Q42 1657 aa16.58■□□□□ 0.24
CCDC197-203ENST00000449472 ITSN1Q15811 1721 aa16.58■□□□□ 0.24
CCDC197-203ENST00000449472 ROCK2O75116 1388 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms