RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 MINK1Q8N4C8 1332 aaPredicted RBP20.49■□□□□ 0.87
SHANK2-210ENST00000449116 TMEM94Q12767 1356 aa20.47■□□□□ 0.87
SHANK2-210ENST00000449116 NCOA3Q9Y6Q9 1424 aa20.47■□□□□ 0.87
SHANK2-210ENST00000449116 TMF1P82094 1093 aa20.47■□□□□ 0.87
SHANK2-210ENST00000449116 LRRC7Q96NW7 1537 aa20.47■□□□□ 0.87
SHANK2-210ENST00000449116 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.47■□□□□ 0.87
SHANK2-210ENST00000449116 RBM33Q96EV2 1170 aaKnown RBP20.46■□□□□ 0.87
SHANK2-210ENST00000449116 ADGRB2O60241 1585 aa20.46■□□□□ 0.87
SHANK2-210ENST00000449116 LTBP4Q8N2S1 1624 aa20.45■□□□□ 0.86
SHANK2-210ENST00000449116 ADGRL3Q9HAR2 1447 aa20.44■□□□□ 0.86
SHANK2-210ENST00000449116 ZNF316A6NFI3 1004 aaPredicted RBP20.44■□□□□ 0.86
SHANK2-210ENST00000449116 EVC2Q86UK5 1308 aa20.44■□□□□ 0.86
SHANK2-210ENST00000449116 DISP3Q9P2K9 1392 aa20.44■□□□□ 0.86
SHANK2-210ENST00000449116 TULP4Q9NRJ4 1543 aa20.43■□□□□ 0.86
SHANK2-210ENST00000449116 C14orf37Q86TY3 774 aa20.43■□□□□ 0.86
SHANK2-210ENST00000449116 NALCNQ8IZF0 1738 aa20.42■□□□□ 0.86
SHANK2-210ENST00000449116 WASLO00401 505 aaPredicted RBP20.42■□□□□ 0.86
SHANK2-210ENST00000449116 C11orf95C9JLR9 678 aaPredicted RBP20.41■□□□□ 0.86
SHANK2-210ENST00000449116 CDCA8Q53HL2 280 aa20.41■□□□□ 0.86
SHANK2-210ENST00000449116 FBXO41Q8TF61 875 aa20.41■□□□□ 0.86
SHANK2-210ENST00000449116 CDC42BPGQ6DT37 1551 aa20.4■□□□□ 0.86
SHANK2-210ENST00000449116 C19orf44Q9H6X5 657 aa20.4■□□□□ 0.86
SHANK2-210ENST00000449116 CDK19Q9BWU1 502 aa20.39■□□□□ 0.85
SHANK2-210ENST00000449116 XIRP1Q702N8 1843 aaKnown RBP20.39■□□□□ 0.85
SHANK2-210ENST00000449116 MSH6P52701 1360 aa20.38■□□□□ 0.85
SHANK2-210ENST00000449116 SRPK2P78362 688 aaKnown RBP20.38■□□□□ 0.85
SHANK2-210ENST00000449116 PUS7Q96PZ0 661 aaKnown RBP20.38■□□□□ 0.85
SHANK2-210ENST00000449116 CCDC7Q96M83 1385 aa20.37■□□□□ 0.85
SHANK2-210ENST00000449116 KIF7Q2M1P5 1343 aa20.37■□□□□ 0.85
SHANK2-210ENST00000449116 WASHC2AQ641Q2 1341 aa20.37■□□□□ 0.85
SHANK2-210ENST00000449116 CABP2Q9NPB3 220 aa20.37■□□□□ 0.85
SHANK2-210ENST00000449116 DCCP43146 1447 aa20.36■□□□□ 0.85
SHANK2-210ENST00000449116 POLR3GLQ9BT43 218 aa20.34■□□□□ 0.85
SHANK2-210ENST00000449116 ATAD2Q6PL18 1390 aa20.34■□□□□ 0.85
SHANK2-210ENST00000449116 FMN2Q9NZ56 1722 aa20.33■□□□□ 0.85
SHANK2-210ENST00000449116 ATF3P18847 181 aa20.33■□□□□ 0.85
SHANK2-210ENST00000449116 CADPS2Q86UW7 1296 aa20.32■□□□□ 0.84
SHANK2-210ENST00000449116 ANKARQ7Z5J8 1434 aa20.32■□□□□ 0.84
SHANK2-210ENST00000449116 ATP7BP35670 1465 aa20.31■□□□□ 0.84
SHANK2-210ENST00000449116 NUDT16Q96DE0 195 aaKnown RBP20.31■□□□□ 0.84
SHANK2-210ENST00000449116 PRR36Q9H6K5 1346 aa20.3■□□□□ 0.84
SHANK2-210ENST00000449116 NUTM2FA1L443 756 aa20.3■□□□□ 0.84
SHANK2-210ENST00000449116 USP32Q8NFA0 1604 aa20.28■□□□□ 0.84
SHANK2-210ENST00000449116 CCDC61Q9Y6R9 512 aa20.28■□□□□ 0.84
SHANK2-210ENST00000449116 NINLQ9Y2I6 1382 aa20.28■□□□□ 0.84
SHANK2-210ENST00000449116 MST1RQ04912 1400 aa20.27■□□□□ 0.84
SHANK2-210ENST00000449116 IQSEC2Q5JU85 1478 aa20.27■□□□□ 0.84
SHANK2-210ENST00000449116 TMC1Q8TDI8 760 aa20.26■□□□□ 0.83
SHANK2-210ENST00000449116 PPIP5K1Q6PFW1 1433 aa20.26■□□□□ 0.83
SHANK2-210ENST00000449116 TOPAZ1Q8N9V7 1692 aa20.26■□□□□ 0.83
SHANK2-210ENST00000449116 C1orf167Q5SNV9 1468 aa20.25■□□□□ 0.83
SHANK2-210ENST00000449116 MYOM1P52179 1685 aa20.25■□□□□ 0.83
SHANK2-210ENST00000449116 CABP1Q9NZU7 370 aa20.24■□□□□ 0.83
SHANK2-210ENST00000449116 ITSN1Q15811 1721 aa20.24■□□□□ 0.83
SHANK2-210ENST00000449116 CERKQ8TCT0 537 aa20.23■□□□□ 0.83
SHANK2-210ENST00000449116 SLC12A5Q9H2X9 1139 aa20.23■□□□□ 0.83
SHANK2-210ENST00000449116 ESCO1Q5FWF5 840 aa20.22■□□□□ 0.83
SHANK2-210ENST00000449116 RGPD8O14715 1765 aaPredicted RBP20.21■□□□□ 0.83
SHANK2-210ENST00000449116 PLEKHG3A1L390 1219 aa20.21■□□□□ 0.83
SHANK2-210ENST00000449116 SLAIN2Q9P270 581 aa20.21■□□□□ 0.83
SHANK2-210ENST00000449116 DDX10Q13206 875 aaKnown RBP20.2■□□□□ 0.82
SHANK2-210ENST00000449116 PHF8Q9UPP1 1060 aa20.2■□□□□ 0.82
SHANK2-210ENST00000449116 ORAI2Q96SN7 254 aa20.19■□□□□ 0.82
SHANK2-210ENST00000449116 TERF2IPQ9NYB0 399 aa20.19■□□□□ 0.82
SHANK2-210ENST00000449116 ANKRD36BQ8N2N9 1353 aa20.19■□□□□ 0.82
SHANK2-210ENST00000449116 PMFBP1Q8TBY8 1022 aa20.18■□□□□ 0.82
SHANK2-210ENST00000449116 PANK3Q9H999 370 aa20.18■□□□□ 0.82
SHANK2-210ENST00000449116 CD163L1Q9NR16 1453 aa20.18■□□□□ 0.82
SHANK2-210ENST00000449116 TOM1O60784 492 aa20.17■□□□□ 0.82
SHANK2-210ENST00000449116 HDGFL2Q7Z4V5 671 aaPredicted RBP20.17■□□□□ 0.82
SHANK2-210ENST00000449116 A0A1W2PP64 1363 aa20.17■□□□□ 0.82
SHANK2-210ENST00000449116 POLR3AO14802 1390 aaPredicted RBP20.17■□□□□ 0.82
SHANK2-210ENST00000449116 KIF1AQ12756 1690 aa20.16■□□□□ 0.82
SHANK2-210ENST00000449116 NGDNQ8NEJ9 315 aaKnown RBP20.16■□□□□ 0.82
SHANK2-210ENST00000449116 ACEP12821 1306 aa20.16■□□□□ 0.82
SHANK2-210ENST00000449116 CPSF1Q10570 1443 aaKnown RBP20.16■□□□□ 0.82
SHANK2-210ENST00000449116 BRINP3Q76B58 766 aa20.15■□□□□ 0.82
SHANK2-210ENST00000449116 ZNF692Q9BU19 519 aaPredicted RBP20.15■□□□□ 0.82
SHANK2-210ENST00000449116 KTN1Q86UP2 1357 aaKnown RBP20.13■□□□□ 0.81
SHANK2-210ENST00000449116 UBAP1LF5GYI3 381 aa20.13■□□□□ 0.81
SHANK2-210ENST00000449116 AKAP12Q02952 1782 aa20.12■□□□□ 0.81
SHANK2-210ENST00000449116 FOXO3O43524 673 aa20.11■□□□□ 0.81
SHANK2-210ENST00000449116 CARD14Q9BXL6 1004 aa20.11■□□□□ 0.81
SHANK2-210ENST00000449116 USP6P35125 1406 aa20.1■□□□□ 0.81
SHANK2-210ENST00000449116 NSD3Q9BZ95 1437 aa20.1■□□□□ 0.81
SHANK2-210ENST00000449116 MON2Q7Z3U7 1717 aa20.1■□□□□ 0.81
SHANK2-210ENST00000449116 NPHP3Q7Z494 1330 aa20.09■□□□□ 0.81
SHANK2-210ENST00000449116 PER1O15534 1290 aaPredicted RBP20.09■□□□□ 0.81
SHANK2-210ENST00000449116 KNSTRNQ9Y448 316 aa20.09■□□□□ 0.81
SHANK2-210ENST00000449116 EDC4Q6P2E9 1401 aaKnown RBP20.09■□□□□ 0.81
SHANK2-210ENST00000449116 ROBO1Q9Y6N7 1651 aa20.08■□□□□ 0.81
SHANK2-210ENST00000449116 PSME1Q06323 249 aa20.08■□□□□ 0.81
SHANK2-210ENST00000449116 BRD4O60885 1362 aaPredicted RBP20.08■□□□□ 0.8
SHANK2-210ENST00000449116 PIP4K2BP78356 416 aa20.06■□□□□ 0.8
SHANK2-210ENST00000449116 SSH2Q76I76 1423 aa20.06■□□□□ 0.8
SHANK2-210ENST00000449116 NRKQ7Z2Y5 1582 aa20.05■□□□□ 0.8
SHANK2-210ENST00000449116 KRT28Q7Z3Y7 464 aa20.05■□□□□ 0.8
SHANK2-210ENST00000449116 DDX17Q92841 729 aaKnown RBP20.05■□□□□ 0.8
SHANK2-210ENST00000449116 CGNL1Q0VF96 1302 aa20.04■□□□□ 0.8
SHANK2-210ENST00000449116 TTC21BQ7Z4L5 1316 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms