RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 RIMS2Q9UQ26 1411 aa14.33□□□□□ -0.12
VIPAS39-203ENST00000448935 TMC1Q8TDI8 760 aa14.33□□□□□ -0.12
VIPAS39-203ENST00000448935 ALKQ9UM73 1620 aa14.32□□□□□ -0.12
VIPAS39-203ENST00000448935 HNRNPUQ00839 825 aaKnown RBP eCLIP14.32□□□□□ -0.12
VIPAS39-203ENST00000448935 CCDC184Q52MB2 194 aa14.32□□□□□ -0.12
VIPAS39-203ENST00000448935 NUTM2DQ5VT03 806 aaPredicted RBP14.32□□□□□ -0.12
VIPAS39-203ENST00000448935 TMEM132EQ6IEE7 984 aa14.32□□□□□ -0.12
VIPAS39-203ENST00000448935 KNSTRNQ9Y448 316 aa14.32□□□□□ -0.12
VIPAS39-203ENST00000448935 NLRP13Q86W25 1043 aa14.31□□□□□ -0.12
VIPAS39-203ENST00000448935 FAM9BQ8IZU0 186 aa14.31□□□□□ -0.12
VIPAS39-203ENST00000448935 FER1L4A9Z1Z3 1794 aa14.31□□□□□ -0.12
VIPAS39-203ENST00000448935 NLRP1Q9C000 1473 aa14.3□□□□□ -0.12
VIPAS39-203ENST00000448935 NPC1L1Q9UHC9 1359 aa14.3□□□□□ -0.12
VIPAS39-203ENST00000448935 KDM4FA0A1W2PPD8 638 aa14.3□□□□□ -0.12
VIPAS39-203ENST00000448935 ILDR1Q86SU0 546 aaPredicted RBP14.3□□□□□ -0.12
VIPAS39-203ENST00000448935 BBXQ8WY36 941 aaPredicted RBP14.3□□□□□ -0.12
VIPAS39-203ENST00000448935 CNGB1Q14028 1251 aaPredicted RBP14.3□□□□□ -0.12
VIPAS39-203ENST00000448935 SPOCK2Q92563 424 aa14.3□□□□□ -0.12
VIPAS39-203ENST00000448935 ASXL1Q8IXJ9 1541 aa14.29□□□□□ -0.12
VIPAS39-203ENST00000448935 EVC2Q86UK5 1308 aa14.29□□□□□ -0.12
VIPAS39-203ENST00000448935 YTHDC2Q9H6S0 1430 aaKnown RBP14.29□□□□□ -0.12
VIPAS39-203ENST00000448935 UBR1Q8IWV7 1749 aa14.28□□□□□ -0.12
VIPAS39-203ENST00000448935 KLHL34Q8N239 644 aa14.28□□□□□ -0.12
VIPAS39-203ENST00000448935 C3P01024 1663 aa14.27□□□□□ -0.12
VIPAS39-203ENST00000448935 ZBTB12Q9Y330 459 aaPredicted RBP14.27□□□□□ -0.12
VIPAS39-203ENST00000448935 DLC1Q96QB1 1528 aa14.27□□□□□ -0.13
VIPAS39-203ENST00000448935 CAPN15O75808 1086 aa14.26□□□□□ -0.13
VIPAS39-203ENST00000448935 ECM2O94769 699 aaPredicted RBP14.26□□□□□ -0.13
VIPAS39-203ENST00000448935 SETD1AO15047 1707 aaKnown RBP14.26□□□□□ -0.13
VIPAS39-203ENST00000448935 CC2D1BQ5T0F9 858 aaKnown RBP14.26□□□□□ -0.13
VIPAS39-203ENST00000448935 PNISRQ8TF01 805 aaKnown RBP14.26□□□□□ -0.13
VIPAS39-203ENST00000448935 ZBED9Q6R2W3 1325 aa14.25□□□□□ -0.13
VIPAS39-203ENST00000448935 PTPRMP28827 1452 aa14.25□□□□□ -0.13
VIPAS39-203ENST00000448935 NINLQ9Y2I6 1382 aa14.25□□□□□ -0.13
VIPAS39-203ENST00000448935 INSRP06213 1382 aa14.23□□□□□ -0.13
VIPAS39-203ENST00000448935 LRPPRCP42704 1394 aaKnown RBP14.23□□□□□ -0.13
VIPAS39-203ENST00000448935 TMEM2Q9UHN6 1383 aa14.23□□□□□ -0.13
VIPAS39-203ENST00000448935 TULP4Q9NRJ4 1543 aa14.23□□□□□ -0.13
VIPAS39-203ENST00000448935 POGKQ9P215 609 aa14.23□□□□□ -0.13
VIPAS39-203ENST00000448935 STK26Q9P289 416 aa14.23□□□□□ -0.13
VIPAS39-203ENST00000448935 NRXN3Q9Y4C0 1643 aa14.22□□□□□ -0.13
VIPAS39-203ENST00000448935 PAXIP1Q6ZW49 1069 aaPredicted RBP14.22□□□□□ -0.13
VIPAS39-203ENST00000448935 USP32Q8NFA0 1604 aa14.21□□□□□ -0.13
VIPAS39-203ENST00000448935 KNDC1Q76NI1 1749 aa14.21□□□□□ -0.13
VIPAS39-203ENST00000448935 ATAD2Q6PL18 1390 aa14.21□□□□□ -0.13
VIPAS39-203ENST00000448935 ABCC11Q96J66 1382 aa14.21□□□□□ -0.13
VIPAS39-203ENST00000448935 PRAM1Q96QH2 718 aa14.19□□□□□ -0.14
VIPAS39-203ENST00000448935 SIRT1Q96EB6 747 aa14.19□□□□□ -0.14
VIPAS39-203ENST00000448935 SLIT1O75093 1534 aa14.18□□□□□ -0.14
VIPAS39-203ENST00000448935 ANKRD36BQ8N2N9 1353 aa14.18□□□□□ -0.14
VIPAS39-203ENST00000448935 PLEKHG1Q9ULL1 1385 aa14.18□□□□□ -0.14
VIPAS39-203ENST00000448935 CFAP44Q96MT7 982 aa14.18□□□□□ -0.14
VIPAS39-203ENST00000448935 EID1Q9Y6B2 187 aa14.18□□□□□ -0.14
VIPAS39-203ENST00000448935 NEFLP07196 543 aa14.17□□□□□ -0.14
VIPAS39-203ENST00000448935 PPP2R1AP30153 589 aa14.17□□□□□ -0.14
VIPAS39-203ENST00000448935 SRPK2P78362 688 aaKnown RBP14.17□□□□□ -0.14
VIPAS39-203ENST00000448935 TECPR2O15040 1411 aa14.17□□□□□ -0.14
VIPAS39-203ENST00000448935 NSD3Q9BZ95 1437 aa14.17□□□□□ -0.14
VIPAS39-203ENST00000448935 NSD2O96028 1365 aa14.17□□□□□ -0.14
VIPAS39-203ENST00000448935 CEBPAP49715 358 aaPredicted RBP14.16□□□□□ -0.14
VIPAS39-203ENST00000448935 CARD14Q9BXL6 1004 aa14.16□□□□□ -0.14
VIPAS39-203ENST00000448935 SLC12A5Q9H2X9 1139 aa14.16□□□□□ -0.14
VIPAS39-203ENST00000448935 ARHGAP23Q9P227 1491 aa14.16□□□□□ -0.14
VIPAS39-203ENST00000448935 FAM135BQ49AJ0 1406 aa14.16□□□□□ -0.14
VIPAS39-203ENST00000448935 CPS1P31327 1500 aa14.16□□□□□ -0.14
VIPAS39-203ENST00000448935 SAFB2Q14151 953 aaKnown RBP eCLIP14.15□□□□□ -0.14
VIPAS39-203ENST00000448935 THEMISQ8N1K5 641 aaPredicted RBP14.15□□□□□ -0.14
VIPAS39-203ENST00000448935 CGNL1Q0VF96 1302 aa14.15□□□□□ -0.14
VIPAS39-203ENST00000448935 MINK1Q8N4C8 1332 aaPredicted RBP14.15□□□□□ -0.14
VIPAS39-203ENST00000448935 RIMS1Q86UR5 1692 aaKnown RBP14.14□□□□□ -0.15
VIPAS39-203ENST00000448935 RNF39Q9H2S5 420 aa14.14□□□□□ -0.15
VIPAS39-203ENST00000448935 CABP2Q9NPB3 220 aa14.14□□□□□ -0.15
VIPAS39-203ENST00000448935 TERF2IPQ9NYB0 399 aa14.14□□□□□ -0.15
VIPAS39-203ENST00000448935 DIP2AQ14689 1571 aa14.13□□□□□ -0.15
VIPAS39-203ENST00000448935 TPRNQ4KMQ1 711 aa14.13□□□□□ -0.15
VIPAS39-203ENST00000448935 TXNDC2Q86VQ3 553 aa14.13□□□□□ -0.15
VIPAS39-203ENST00000448935 METP08581 1390 aa14.13□□□□□ -0.15
VIPAS39-203ENST00000448935 ADAMTSL3P82987 1691 aa14.12□□□□□ -0.15
VIPAS39-203ENST00000448935 BLMP54132 1417 aaPredicted RBP14.12□□□□□ -0.15
VIPAS39-203ENST00000448935 ADAMTS13Q76LX8 1427 aa14.12□□□□□ -0.15
VIPAS39-203ENST00000448935 WDR43Q15061 677 aaKnown RBP eCLIP14.12□□□□□ -0.15
VIPAS39-203ENST00000448935 CDK19Q9BWU1 502 aa14.12□□□□□ -0.15
VIPAS39-203ENST00000448935 HDGFL2Q7Z4V5 671 aaPredicted RBP14.11□□□□□ -0.15
VIPAS39-203ENST00000448935 MORC1Q86VD1 984 aa14.11□□□□□ -0.15
VIPAS39-203ENST00000448935 CEP170BQ9Y4F5 1589 aaPredicted RBP14.11□□□□□ -0.15
VIPAS39-203ENST00000448935 SMG6Q86US8 1419 aaKnown RBP14.1□□□□□ -0.15
VIPAS39-203ENST00000448935 MED14O60244 1454 aa14.1□□□□□ -0.15
VIPAS39-203ENST00000448935 PLCD3Q8N3E9 789 aa14.1□□□□□ -0.15
VIPAS39-203ENST00000448935 RGL2O15211 777 aa14.09□□□□□ -0.15
VIPAS39-203ENST00000448935 LTKP29376 864 aa14.09□□□□□ -0.15
VIPAS39-203ENST00000448935 PDE3BQ13370 1112 aa14.09□□□□□ -0.15
VIPAS39-203ENST00000448935 SUPT16HQ9Y5B9 1047 aaKnown RBP14.09□□□□□ -0.15
VIPAS39-203ENST00000448935 ZNF142P52746 1687 aaPredicted RBP14.09□□□□□ -0.15
VIPAS39-203ENST00000448935 ATP7BP35670 1465 aa14.09□□□□□ -0.15
VIPAS39-203ENST00000448935 ANKRD26Q9UPS8 1709 aa14.09□□□□□ -0.15
VIPAS39-203ENST00000448935 A0A1W2PP64 1363 aa14.09□□□□□ -0.15
VIPAS39-203ENST00000448935 WAPLQ7Z5K2 1190 aa14.08□□□□□ -0.15
VIPAS39-203ENST00000448935 TBX22Q9Y458 520 aa14.08□□□□□ -0.15
VIPAS39-203ENST00000448935 POLR3AO14802 1390 aaPredicted RBP14.08□□□□□ -0.16
VIPAS39-203ENST00000448935 SETD1BQ9UPS6 1966 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms