RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 ESCO1Q5FWF5 840 aa23.16■■□□□ 1.3
TRA2A-203ENST00000448549 ANKRD30BQ9BXX2 1392 aa23.15■■□□□ 1.3
TRA2A-203ENST00000448549 TMEM132EQ6IEE7 984 aa23.15■■□□□ 1.3
TRA2A-203ENST00000448549 WAPLQ7Z5K2 1190 aa23.15■■□□□ 1.3
TRA2A-203ENST00000448549 CDK12Q9NYV4 1490 aaPredicted RBP23.15■■□□□ 1.3
TRA2A-203ENST00000448549 RBM6P78332 1123 aaKnown RBP23.14■■□□□ 1.29
TRA2A-203ENST00000448549 LAMC1P11047 1609 aa23.12■■□□□ 1.29
TRA2A-203ENST00000448549 LRPPRCP42704 1394 aaKnown RBP23.12■■□□□ 1.29
TRA2A-203ENST00000448549 NUTM2FA1L443 756 aa23.11■■□□□ 1.29
TRA2A-203ENST00000448549 NPHP3Q7Z494 1330 aa23.1■■□□□ 1.29
TRA2A-203ENST00000448549 TECPR2O15040 1411 aa23.1■■□□□ 1.29
TRA2A-203ENST00000448549 FOXO3O43524 673 aa23.1■■□□□ 1.29
TRA2A-203ENST00000448549 ABCC11Q96J66 1382 aa23.1■■□□□ 1.29
TRA2A-203ENST00000448549 XPCQ01831 940 aaPredicted RBP23.09■■□□□ 1.29
TRA2A-203ENST00000448549 USP21Q9UK80 565 aa23.09■■□□□ 1.29
TRA2A-203ENST00000448549 PLEKHH1Q9ULM0 1364 aa23.09■■□□□ 1.29
TRA2A-203ENST00000448549 CDC42BPGQ6DT37 1551 aa23.09■■□□□ 1.29
TRA2A-203ENST00000448549 RGS12O14924 1447 aa23.08■■□□□ 1.29
TRA2A-203ENST00000448549 PIK3C2GO75747 1445 aa23.08■■□□□ 1.28
TRA2A-203ENST00000448549 FNBP4Q8N3X1 1017 aaPredicted RBP23.06■■□□□ 1.28
TRA2A-203ENST00000448549 C14orf93Q9H972 538 aaKnown RBP23.04■■□□□ 1.28
TRA2A-203ENST00000448549 YTHDC2Q9H6S0 1430 aaKnown RBP23.04■■□□□ 1.28
TRA2A-203ENST00000448549 ACIN1Q9UKV3 1341 aaKnown RBP23.04■■□□□ 1.28
TRA2A-203ENST00000448549 PXDNQ92626 1479 aa23.04■■□□□ 1.28
TRA2A-203ENST00000448549 TRPC5Q9UL62 973 aaPredicted RBP23.03■■□□□ 1.28
TRA2A-203ENST00000448549 MYOM2P54296 1465 aa23.01■■□□□ 1.27
TRA2A-203ENST00000448549 CFAP70Q5T0N1 1121 aa23.01■■□□□ 1.27
TRA2A-203ENST00000448549 IFT172Q9UG01 1749 aa23■■□□□ 1.27
TRA2A-203ENST00000448549 SIRT1Q96EB6 747 aa23■■□□□ 1.27
TRA2A-203ENST00000448549 COL22A1Q8NFW1 1626 aaPredicted RBP22.99■■□□□ 1.27
TRA2A-203ENST00000448549 DHX57Q6P158 1386 aaKnown RBP22.97■■□□□ 1.27
TRA2A-203ENST00000448549 ATRNO75882 1429 aa22.97■■□□□ 1.27
TRA2A-203ENST00000448549 RAB3GAP2Q9H2M9 1393 aa22.96■■□□□ 1.27
TRA2A-203ENST00000448549 NRXN1Q9ULB1 1477 aa22.96■■□□□ 1.27
TRA2A-203ENST00000448549 SAFB2Q14151 953 aaKnown RBP eCLIP22.95■■□□□ 1.261e-8■■□□□ 12.9
TRA2A-203ENST00000448549 SPATA31A3Q5VYP0 1347 aa22.95■■□□□ 1.26
TRA2A-203ENST00000448549 KRT28Q7Z3Y7 464 aa22.95■■□□□ 1.26
TRA2A-203ENST00000448549 BCL9LQ86UU0 1499 aa22.95■■□□□ 1.26
TRA2A-203ENST00000448549 KNDC1Q76NI1 1749 aa22.94■■□□□ 1.26
TRA2A-203ENST00000448549 PRAM1Q96QH2 718 aa22.94■■□□□ 1.26
TRA2A-203ENST00000448549 ATAD2Q6PL18 1390 aa22.92■■□□□ 1.26
TRA2A-203ENST00000448549 PHF8Q9UPP1 1060 aa22.92■■□□□ 1.26
TRA2A-203ENST00000448549 FMN2Q9NZ56 1722 aa22.91■■□□□ 1.26
TRA2A-203ENST00000448549 GJD4Q96KN9 370 aaPredicted RBP22.9■■□□□ 1.26
TRA2A-203ENST00000448549 POGKQ9P215 609 aa22.9■■□□□ 1.26
TRA2A-203ENST00000448549 PSME1Q06323 249 aa22.88■■□□□ 1.25
TRA2A-203ENST00000448549 PLEKHG5O94827 1062 aa22.87■■□□□ 1.25
TRA2A-203ENST00000448549 UNC5CLQ8IV45 518 aa22.87■■□□□ 1.25
TRA2A-203ENST00000448549 HAP1P54257 671 aaPredicted RBP22.86■■□□□ 1.25
TRA2A-203ENST00000448549 CABLES1Q8TDN4 633 aa22.86■■□□□ 1.25
TRA2A-203ENST00000448549 KDM2AQ9Y2K7 1162 aa22.86■■□□□ 1.25
TRA2A-203ENST00000448549 KIF1AQ12756 1690 aa22.86■■□□□ 1.25
TRA2A-203ENST00000448549 LMOD2Q6P5Q4 547 aa22.85■■□□□ 1.25
TRA2A-203ENST00000448549 TRAK1Q9UPV9 953 aa22.85■■□□□ 1.25
TRA2A-203ENST00000448549 TNS3Q68CZ2 1445 aa22.84■■□□□ 1.25
TRA2A-203ENST00000448549 PMFBP1Q8TBY8 1022 aa22.84■■□□□ 1.25
TRA2A-203ENST00000448549 SLIT2O94813 1529 aa22.83■■□□□ 1.25
TRA2A-203ENST00000448549 DCAF11Q8TEB1 546 aa22.83■■□□□ 1.25
TRA2A-203ENST00000448549 HIRIP3Q9BW71 556 aaPredicted RBP22.83■■□□□ 1.25
TRA2A-203ENST00000448549 DLC1Q96QB1 1528 aa22.82■■□□□ 1.24
TRA2A-203ENST00000448549 SBNO1A3KN83 1393 aa22.81■■□□□ 1.24
TRA2A-203ENST00000448549 ADGRB1O14514 1584 aa22.8■■□□□ 1.24
TRA2A-203ENST00000448549 ANKARQ7Z5J8 1434 aa22.8■■□□□ 1.24
TRA2A-203ENST00000448549 MINK1Q8N4C8 1332 aaPredicted RBP22.8■■□□□ 1.24
TRA2A-203ENST00000448549 RALGAPBQ86X10 1494 aa22.79■■□□□ 1.24
TRA2A-203ENST00000448549 MARF1Q9Y4F3 1742 aaKnown RBP22.79■■□□□ 1.24
TRA2A-203ENST00000448549 ARHGEF10O15013 1369 aa22.77■■□□□ 1.24
TRA2A-203ENST00000448549 CCDC125Q86Z20 511 aa22.77■■□□□ 1.24
TRA2A-203ENST00000448549 USP32Q8NFA0 1604 aa22.77■■□□□ 1.24
TRA2A-203ENST00000448549 VPS72Q15906 364 aa22.76■■□□□ 1.23
TRA2A-203ENST00000448549 PRR36Q9H6K5 1346 aa22.76■■□□□ 1.23
TRA2A-203ENST00000448549 HRCP23327 699 aa22.75■■□□□ 1.23
TRA2A-203ENST00000448549 STAC3Q96MF2 364 aa22.75■■□□□ 1.23
TRA2A-203ENST00000448549 RGPD8O14715 1765 aaPredicted RBP22.75■■□□□ 1.23
TRA2A-203ENST00000448549 GLI3P10071 1580 aa22.75■■□□□ 1.23
TRA2A-203ENST00000448549 FAM83GA6ND36 823 aa22.74■■□□□ 1.23
TRA2A-203ENST00000448549 WASLO00401 505 aaPredicted RBP22.74■■□□□ 1.23
TRA2A-203ENST00000448549 CCDC9Q9Y3X0 531 aaKnown RBP22.74■■□□□ 1.23
TRA2A-203ENST00000448549 ADGRB2O60241 1585 aa22.73■■□□□ 1.23
TRA2A-203ENST00000448549 SEPT12Q8IYM1 358 aa22.73■■□□□ 1.23
TRA2A-203ENST00000448549 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.73■■□□□ 1.23
TRA2A-203ENST00000448549 ZRANB1Q9UGI0 708 aa22.72■■□□□ 1.23
TRA2A-203ENST00000448549 GPRASP1Q5JY77 1395 aa22.72■■□□□ 1.23
TRA2A-203ENST00000448549 EIF3AQ14152 1382 aaKnown RBP22.71■■□□□ 1.23
TRA2A-203ENST00000448549 ONECUT3O60422 494 aaPredicted RBP22.69■■□□□ 1.22
TRA2A-203ENST00000448549 NGDNQ8NEJ9 315 aaKnown RBP22.69■■□□□ 1.22
TRA2A-203ENST00000448549 TULP4Q9NRJ4 1543 aa22.67■■□□□ 1.22
TRA2A-203ENST00000448549 EP400Q96L91 3159 aa22.67■■□□□ 1.22
TRA2A-203ENST00000448549 BLMP54132 1417 aaPredicted RBP22.66■■□□□ 1.22
TRA2A-203ENST00000448549 PAK3O75914 559 aaPredicted RBP22.66■■□□□ 1.22
TRA2A-203ENST00000448549 BTG4Q9NY30 223 aa22.66■■□□□ 1.22
TRA2A-203ENST00000448549 KRT27Q7Z3Y8 459 aa22.64■■□□□ 1.21
TRA2A-203ENST00000448549 NUDT16Q96DE0 195 aaKnown RBP22.64■■□□□ 1.21
TRA2A-203ENST00000448549 PLCH1Q4KWH8 1693 aa22.63■■□□□ 1.21
TRA2A-203ENST00000448549 A0A0G2JS52 829 aa22.63■■□□□ 1.21
TRA2A-203ENST00000448549 MYT1Q01538 1121 aa22.63■■□□□ 1.21
TRA2A-203ENST00000448549 DEFB132Q7Z7B7 95 aa22.63■■□□□ 1.21
TRA2A-203ENST00000448549 ABCA3Q99758 1704 aa22.62■■□□□ 1.21
TRA2A-203ENST00000448549 TRPM3Q9HCF6 1732 aaPredicted RBP22.62■■□□□ 1.21
TRA2A-203ENST00000448549 FAM98CQ17RN3 349 aaKnown RBP22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms