RNA–Protein interactions for RNA: ENST00000448340.5

HLCS-205, Transcript of holocarboxylase synthetase, humanhuman

TSL 1 (best)

Gene HLCS, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-205ENST00000448340 RXRBP28702 533 aa25.34■■□□□ 1.65
HLCS-205ENST00000448340 MST1RQ04912 1400 aa25.32■■□□□ 1.64
HLCS-205ENST00000448340 NUTM2BA6NNL0 878 aaPredicted RBP25.31■■□□□ 1.64
HLCS-205ENST00000448340 NUTM2EB1AL46 878 aaPredicted RBP25.31■■□□□ 1.64
HLCS-205ENST00000448340 NUTM2AQ8IVF1 878 aaPredicted RBP25.31■■□□□ 1.64
HLCS-205ENST00000448340 CDK12Q9NYV4 1490 aaPredicted RBP25.31■■□□□ 1.64
HLCS-205ENST00000448340 ASXL1Q8IXJ9 1541 aa25.31■■□□□ 1.64
HLCS-205ENST00000448340 KIAA1210Q9ULL0 1709 aa25.3■■□□□ 1.64
HLCS-205ENST00000448340 XRN1Q8IZH2 1706 aaKnown RBP25.29■■□□□ 1.64
HLCS-205ENST00000448340 TMEM132EQ6IEE7 984 aa25.28■■□□□ 1.64
HLCS-205ENST00000448340 AFF2P51816 1311 aa25.28■■□□□ 1.64
HLCS-205ENST00000448340 LRRC59Q96AG4 307 aaKnown RBP25.26■■□□□ 1.63
HLCS-205ENST00000448340 NBPF8Q3BBV2 869 aa25.25■■□□□ 1.63
HLCS-205ENST00000448340 LRPPRCP42704 1394 aaKnown RBP25.25■■□□□ 1.63
HLCS-205ENST00000448340 ADGRB1O14514 1584 aa25.25■■□□□ 1.63
HLCS-205ENST00000448340 YTHDC2Q9H6S0 1430 aaKnown RBP25.24■■□□□ 1.63
HLCS-205ENST00000448340 DDX17Q92841 729 aaKnown RBP25.24■■□□□ 1.63
HLCS-205ENST00000448340 NHSL1Q5SYE7 1610 aa25.23■■□□□ 1.63
HLCS-205ENST00000448340 TRPM1Q7Z4N2 1603 aa25.23■■□□□ 1.63
HLCS-205ENST00000448340 ABCC11Q96J66 1382 aa25.22■■□□□ 1.63
HLCS-205ENST00000448340 ADGRL3Q9HAR2 1447 aa25.21■■□□□ 1.63
HLCS-205ENST00000448340 PNPLA6Q8IY17 1366 aa25.21■■□□□ 1.63
HLCS-205ENST00000448340 NBPF1Q3BBV0 1214 aa25.21■■□□□ 1.63
HLCS-205ENST00000448340 TECPR2O15040 1411 aa25.2■■□□□ 1.63
HLCS-205ENST00000448340 STK26Q9P289 416 aa25.2■■□□□ 1.62
HLCS-205ENST00000448340 PTCH1Q13635 1447 aa25.2■■□□□ 1.62
HLCS-205ENST00000448340 KNDC1Q76NI1 1749 aa25.19■■□□□ 1.62
HLCS-205ENST00000448340 QTRT2Q9H974 415 aaKnown RBP25.18■■□□□ 1.62
HLCS-205ENST00000448340 SIRT1Q96EB6 747 aa25.17■■□□□ 1.62
HLCS-205ENST00000448340 ROBO2Q9HCK4 1378 aa25.17■■□□□ 1.62
HLCS-205ENST00000448340 RGS12O14924 1447 aa25.16■■□□□ 1.62
HLCS-205ENST00000448340 RBM6P78332 1123 aaKnown RBP25.16■■□□□ 1.62
HLCS-205ENST00000448340 C8orf37Q96NL8 207 aa25.16■■□□□ 1.62
HLCS-205ENST00000448340 ROCK2O75116 1388 aaKnown RBP25.16■■□□□ 1.62
HLCS-205ENST00000448340 RALGAPBQ86X10 1494 aa25.15■■□□□ 1.62
HLCS-205ENST00000448340 DLC1Q96QB1 1528 aa25.14■■□□□ 1.62
HLCS-205ENST00000448340 C1orf167Q5SNV9 1468 aa25.14■■□□□ 1.61
HLCS-205ENST00000448340 TRAK1Q9UPV9 953 aa25.13■■□□□ 1.61
HLCS-205ENST00000448340 GPRASP1Q5JY77 1395 aa25.13■■□□□ 1.61
HLCS-205ENST00000448340 SOS2Q07890 1332 aaPredicted RBP25.11■■□□□ 1.61
HLCS-205ENST00000448340 NALCNQ8IZF0 1738 aa25.1■■□□□ 1.61
HLCS-205ENST00000448340 SRCAPQ6ZRS2 3230 aa25.1■■□□□ 1.61
HLCS-205ENST00000448340 WAPLQ7Z5K2 1190 aa25.09■■□□□ 1.61
HLCS-205ENST00000448340 NGLY1Q96IV0 654 aa25.08■■□□□ 1.61
HLCS-205ENST00000448340 ORAI2Q96SN7 254 aa25.08■■□□□ 1.61
HLCS-205ENST00000448340 CARD11Q9BXL7 1154 aa25.08■■□□□ 1.61
HLCS-205ENST00000448340 ADAMTS2O95450 1211 aa25.07■■□□□ 1.6
HLCS-205ENST00000448340 PRAM1Q96QH2 718 aa25.07■■□□□ 1.6
HLCS-205ENST00000448340 POGKQ9P215 609 aa25.07■■□□□ 1.6
HLCS-205ENST00000448340 PLEKHH1Q9ULM0 1364 aa25.06■■□□□ 1.6
HLCS-205ENST00000448340 ARHGEF28Q8N1W1 1705 aaKnown RBP25.06■■□□□ 1.6
HLCS-205ENST00000448340 FNBP4Q8N3X1 1017 aaPredicted RBP25.04■■□□□ 1.6
HLCS-205ENST00000448340 SAFB2Q14151 953 aaKnown RBP eCLIP25■■□□□ 1.59
HLCS-205ENST00000448340 USP21Q9UK80 565 aa25■■□□□ 1.59
HLCS-205ENST00000448340 EIF3AQ14152 1382 aaKnown RBP25■■□□□ 1.59
HLCS-205ENST00000448340 CENPJQ9HC77 1338 aaPredicted RBP24.98■■□□□ 1.59
HLCS-205ENST00000448340 TRPC5Q9UL62 973 aaPredicted RBP24.98■■□□□ 1.59
HLCS-205ENST00000448340 ATRNO75882 1429 aa24.96■■□□□ 1.59
HLCS-205ENST00000448340 ATAD2Q6PL18 1390 aa24.96■■□□□ 1.59
HLCS-205ENST00000448340 CDC42BPGQ6DT37 1551 aa24.94■■□□□ 1.58
HLCS-205ENST00000448340 ADGRB2O60241 1585 aa24.93■■□□□ 1.58
HLCS-205ENST00000448340 MINK1Q8N4C8 1332 aaPredicted RBP24.93■■□□□ 1.58
HLCS-205ENST00000448340 COL22A1Q8NFW1 1626 aaPredicted RBP24.93■■□□□ 1.58
HLCS-205ENST00000448340 QRICH2Q9H0J4 1663 aa24.91■■□□□ 1.58
HLCS-205ENST00000448340 BCL9LQ86UU0 1499 aa24.91■■□□□ 1.58
HLCS-205ENST00000448340 USP47Q96K76 1375 aa24.91■■□□□ 1.58
HLCS-205ENST00000448340 HIRIP3Q9BW71 556 aaPredicted RBP24.9■■□□□ 1.58
HLCS-205ENST00000448340 PXDNQ92626 1479 aa24.89■■□□□ 1.58
HLCS-205ENST00000448340 ZEB1P37275 1124 aaPredicted RBP24.89■■□□□ 1.58
HLCS-205ENST00000448340 ESCO1Q5FWF5 840 aa24.89■■□□□ 1.58
HLCS-205ENST00000448340 NPHP3Q7Z494 1330 aa24.88■■□□□ 1.57
HLCS-205ENST00000448340 SBNO2Q9Y2G9 1366 aa24.88■■□□□ 1.57
HLCS-205ENST00000448340 WASLO00401 505 aaPredicted RBP24.87■■□□□ 1.57
HLCS-205ENST00000448340 EP400Q96L91 3159 aa24.87■■□□□ 1.57
HLCS-205ENST00000448340 FMN2Q9NZ56 1722 aa24.86■■□□□ 1.57
HLCS-205ENST00000448340 ST20-MTHFSA0A0A6YYL1 179 aa24.86■■□□□ 1.57
HLCS-205ENST00000448340 FOXO3O43524 673 aa24.86■■□□□ 1.57
HLCS-205ENST00000448340 SLC24A1O60721 1099 aa24.83■■□□□ 1.57
HLCS-205ENST00000448340 EIF4G2P78344 907 aaKnown RBP eCLIP24.83■■□□□ 1.57
HLCS-205ENST00000448340 XPCQ01831 940 aaPredicted RBP24.83■■□□□ 1.57
HLCS-205ENST00000448340 GJD4Q96KN9 370 aaPredicted RBP24.83■■□□□ 1.57
HLCS-205ENST00000448340 CCDC125Q86Z20 511 aa24.82■■□□□ 1.56
HLCS-205ENST00000448340 CDK19Q9BWU1 502 aa24.82■■□□□ 1.56
HLCS-205ENST00000448340 TESK2Q96S53 571 aa24.81■■□□□ 1.56
HLCS-205ENST00000448340 ZRANB1Q9UGI0 708 aa24.81■■□□□ 1.56
HLCS-205ENST00000448340 EVC2Q86UK5 1308 aa24.81■■□□□ 1.56
HLCS-205ENST00000448340 ANKARQ7Z5J8 1434 aa24.8■■□□□ 1.56
HLCS-205ENST00000448340 NUTM2FA1L443 756 aa24.8■■□□□ 1.56
HLCS-205ENST00000448340 TULP4Q9NRJ4 1543 aa24.8■■□□□ 1.56
HLCS-205ENST00000448340 HSPA5P11021 654 aaKnown RBP24.77■■□□□ 1.56
HLCS-205ENST00000448340 USP32Q8NFA0 1604 aa24.76■■□□□ 1.55
HLCS-205ENST00000448340 SRPK2P78362 688 aaKnown RBP24.76■■□□□ 1.55
HLCS-205ENST00000448340 UNC5CLQ8IV45 518 aa24.76■■□□□ 1.55
HLCS-205ENST00000448340 SPATA31A3Q5VYP0 1347 aa24.76■■□□□ 1.55
HLCS-205ENST00000448340 SLIT2O94813 1529 aa24.76■■□□□ 1.55
HLCS-205ENST00000448340 RGPD8O14715 1765 aaPredicted RBP24.75■■□□□ 1.55
HLCS-205ENST00000448340 PRR36Q9H6K5 1346 aa24.75■■□□□ 1.55
HLCS-205ENST00000448340 NUDT16Q96DE0 195 aaKnown RBP24.74■■□□□ 1.55
HLCS-205ENST00000448340 CABP2Q9NPB3 220 aa24.74■■□□□ 1.55
HLCS-205ENST00000448340 ATP7BP35670 1465 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms