RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 YTHDC2Q9H6S0 1430 aaKnown RBP16.48■□□□□ 0.23
LINC00408-201ENST00000447784 ZEB1P37275 1124 aaPredicted RBP16.48■□□□□ 0.23
LINC00408-201ENST00000447784 ASXL1Q8IXJ9 1541 aa16.48■□□□□ 0.23
LINC00408-201ENST00000447784 MED1Q15648 1581 aaPredicted RBP16.47■□□□□ 0.23
LINC00408-201ENST00000447784 NBPF8Q3BBV2 869 aa16.45■□□□□ 0.22
LINC00408-201ENST00000447784 WAPLQ7Z5K2 1190 aa16.45■□□□□ 0.22
LINC00408-201ENST00000447784 JCADQ9P266 1359 aa16.45■□□□□ 0.22
LINC00408-201ENST00000447784 LAMC1P11047 1609 aa16.45■□□□□ 0.22
LINC00408-201ENST00000447784 AHDC1Q5TGY3 1603 aaPredicted RBP16.45■□□□□ 0.22
LINC00408-201ENST00000447784 C1orf167Q5SNV9 1468 aa16.44■□□□□ 0.22
LINC00408-201ENST00000447784 NALCNQ8IZF0 1738 aa16.44■□□□□ 0.22
LINC00408-201ENST00000447784 ROCK2O75116 1388 aaKnown RBP16.43■□□□□ 0.22
LINC00408-201ENST00000447784 NBPF1Q3BBV0 1214 aa16.42■□□□□ 0.22
LINC00408-201ENST00000447784 PLEKHH1Q9ULM0 1364 aa16.41■□□□□ 0.22
LINC00408-201ENST00000447784 CARD11Q9BXL7 1154 aa16.41■□□□□ 0.22
LINC00408-201ENST00000447784 CDC42BPGQ6DT37 1551 aa16.41■□□□□ 0.22
LINC00408-201ENST00000447784 KNDC1Q76NI1 1749 aa16.41■□□□□ 0.22
LINC00408-201ENST00000447784 COL16A1Q07092 1604 aaPredicted RBP16.41■□□□□ 0.22
LINC00408-201ENST00000447784 PHLPP1O60346 1717 aa16.4■□□□□ 0.22
LINC00408-201ENST00000447784 ADGRB1O14514 1584 aa16.4■□□□□ 0.22
LINC00408-201ENST00000447784 SPATA31A6Q5VVP1 1343 aa16.4■□□□□ 0.22
LINC00408-201ENST00000447784 LRRC59Q96AG4 307 aaKnown RBP16.39■□□□□ 0.21
LINC00408-201ENST00000447784 PRAM1Q96QH2 718 aa16.39■□□□□ 0.21
LINC00408-201ENST00000447784 ORAI2Q96SN7 254 aa16.39■□□□□ 0.21
LINC00408-201ENST00000447784 DLC1Q96QB1 1528 aa16.39■□□□□ 0.21
LINC00408-201ENST00000447784 TRAK1Q9UPV9 953 aa16.38■□□□□ 0.21
LINC00408-201ENST00000447784 POGKQ9P215 609 aa16.37■□□□□ 0.21
LINC00408-201ENST00000447784 SOS2Q07890 1332 aaPredicted RBP16.36■□□□□ 0.21
LINC00408-201ENST00000447784 ESCO1Q5FWF5 840 aa16.35■□□□□ 0.21
LINC00408-201ENST00000447784 POTEDQ86YR6 584 aa16.35■□□□□ 0.21
LINC00408-201ENST00000447784 DDX17Q92841 729 aaKnown RBP16.35■□□□□ 0.21
LINC00408-201ENST00000447784 NHSL1Q5SYE7 1610 aa16.34■□□□□ 0.21
LINC00408-201ENST00000447784 RALGAPBQ86X10 1494 aa16.34■□□□□ 0.21
LINC00408-201ENST00000447784 NPHP3Q7Z494 1330 aa16.33■□□□□ 0.2
LINC00408-201ENST00000447784 EIF3AQ14152 1382 aaKnown RBP16.33■□□□□ 0.2
LINC00408-201ENST00000447784 SAFB2Q14151 953 aaKnown RBP eCLIP16.32■□□□□ 0.2
LINC00408-201ENST00000447784 GPRASP1Q5JY77 1395 aa16.32■□□□□ 0.2
LINC00408-201ENST00000447784 RGS17Q9UGC6 210 aaPredicted RBP16.32■□□□□ 0.2
LINC00408-201ENST00000447784 NUTM2FA1L443 756 aa16.31■□□□□ 0.2
LINC00408-201ENST00000447784 SHPRHQ149N8 1683 aa16.3■□□□□ 0.2
LINC00408-201ENST00000447784 PNPLA6Q8IY17 1366 aa16.3■□□□□ 0.2
LINC00408-201ENST00000447784 FOXO3O43524 673 aa16.29■□□□□ 0.2
LINC00408-201ENST00000447784 ANKARQ7Z5J8 1434 aa16.28■□□□□ 0.2
LINC00408-201ENST00000447784 CENPJQ9HC77 1338 aaPredicted RBP16.28■□□□□ 0.2
LINC00408-201ENST00000447784 LRP6O75581 1613 aa16.28■□□□□ 0.2
LINC00408-201ENST00000447784 EIF4G2P78344 907 aaKnown RBP eCLIP16.28■□□□□ 0.2
LINC00408-201ENST00000447784 ADGRB2O60241 1585 aa16.28■□□□□ 0.2
LINC00408-201ENST00000447784 FMN2Q9NZ56 1722 aa16.28■□□□□ 0.2
LINC00408-201ENST00000447784 KIAA1210Q9ULL0 1709 aa16.27■□□□□ 0.19
LINC00408-201ENST00000447784 MINK1Q8N4C8 1332 aaPredicted RBP16.26■□□□□ 0.19
LINC00408-201ENST00000447784 WASLO00401 505 aaPredicted RBP16.26■□□□□ 0.19
LINC00408-201ENST00000447784 SLC24A1O60721 1099 aa16.26■□□□□ 0.19
LINC00408-201ENST00000447784 MEX3CQ5U5Q3 659 aaKnown RBP16.26■□□□□ 0.19
LINC00408-201ENST00000447784 PHF8Q9UPP1 1060 aa16.26■□□□□ 0.19
LINC00408-201ENST00000447784 USP47Q96K76 1375 aa16.26■□□□□ 0.19
LINC00408-201ENST00000447784 PXDNQ92626 1479 aa16.25■□□□□ 0.19
LINC00408-201ENST00000447784 NUTM2BA6NNL0 878 aaPredicted RBP16.25■□□□□ 0.19
LINC00408-201ENST00000447784 NUTM2EB1AL46 878 aaPredicted RBP16.25■□□□□ 0.19
LINC00408-201ENST00000447784 NUTM2AQ8IVF1 878 aaPredicted RBP16.25■□□□□ 0.19
LINC00408-201ENST00000447784 HIRIP3Q9BW71 556 aaPredicted RBP16.25■□□□□ 0.19
LINC00408-201ENST00000447784 TRPM1Q7Z4N2 1603 aa16.24■□□□□ 0.19
LINC00408-201ENST00000447784 ST20-MTHFSA0A0A6YYL1 179 aa16.24■□□□□ 0.19
LINC00408-201ENST00000447784 POTEAQ6S8J7 498 aa16.24■□□□□ 0.19
LINC00408-201ENST00000447784 ZNF772Q68DY9 489 aaPredicted RBP16.23■□□□□ 0.19
LINC00408-201ENST00000447784 KRT28Q7Z3Y7 464 aa16.23■□□□□ 0.19
LINC00408-201ENST00000447784 KIF1AQ12756 1690 aa16.22■□□□□ 0.19
LINC00408-201ENST00000447784 XPCQ01831 940 aaPredicted RBP16.22■□□□□ 0.19
LINC00408-201ENST00000447784 PSME1Q06323 249 aa16.22■□□□□ 0.19
LINC00408-201ENST00000447784 SPATA31A3Q5VYP0 1347 aa16.21■□□□□ 0.19
LINC00408-201ENST00000447784 PRR36Q9H6K5 1346 aa16.21■□□□□ 0.19
LINC00408-201ENST00000447784 TULP4Q9NRJ4 1543 aa16.21■□□□□ 0.19
LINC00408-201ENST00000447784 HSPA5P11021 654 aaKnown RBP16.21■□□□□ 0.19
LINC00408-201ENST00000447784 EVC2Q86UK5 1308 aa16.19■□□□□ 0.18
LINC00408-201ENST00000447784 ARHGEF28Q8N1W1 1705 aaKnown RBP16.19■□□□□ 0.18
LINC00408-201ENST00000447784 SBNO1A3KN83 1393 aa16.19■□□□□ 0.18
LINC00408-201ENST00000447784 PMFBP1Q8TBY8 1022 aa16.19■□□□□ 0.18
LINC00408-201ENST00000447784 SRPK2P78362 688 aaKnown RBP16.18■□□□□ 0.18
LINC00408-201ENST00000447784 TMF1P82094 1093 aa16.18■□□□□ 0.18
LINC00408-201ENST00000447784 NUDT16Q96DE0 195 aaKnown RBP16.18■□□□□ 0.18
LINC00408-201ENST00000447784 CDK19Q9BWU1 502 aa16.18■□□□□ 0.18
LINC00408-201ENST00000447784 USP32Q8NFA0 1604 aa16.17■□□□□ 0.18
LINC00408-201ENST00000447784 COL22A1Q8NFW1 1626 aaPredicted RBP16.17■□□□□ 0.18
LINC00408-201ENST00000447784 ADAMTS2O95450 1211 aa16.17■□□□□ 0.18
LINC00408-201ENST00000447784 CDCA8Q53HL2 280 aa16.17■□□□□ 0.18
LINC00408-201ENST00000447784 C8orf37Q96NL8 207 aa16.17■□□□□ 0.18
LINC00408-201ENST00000447784 AFF2P51816 1311 aa16.17■□□□□ 0.18
LINC00408-201ENST00000447784 CCDC61Q9Y6R9 512 aa16.16■□□□□ 0.18
LINC00408-201ENST00000447784 TNS3Q68CZ2 1445 aa16.16■□□□□ 0.18
LINC00408-201ENST00000447784 ATP7BP35670 1465 aa16.16■□□□□ 0.18
LINC00408-201ENST00000447784 NGLY1Q96IV0 654 aa16.15■□□□□ 0.18
LINC00408-201ENST00000447784 TESK2Q96S53 571 aa16.15■□□□□ 0.18
LINC00408-201ENST00000447784 ARHGEF10O15013 1369 aa16.14■□□□□ 0.17
LINC00408-201ENST00000447784 SBNO2Q9Y2G9 1366 aa16.14■□□□□ 0.17
LINC00408-201ENST00000447784 FNBP4Q8N3X1 1017 aaPredicted RBP16.14■□□□□ 0.17
LINC00408-201ENST00000447784 NGDNQ8NEJ9 315 aaKnown RBP16.14■□□□□ 0.17
LINC00408-201ENST00000447784 PLEKHG3A1L390 1219 aa16.13■□□□□ 0.17
LINC00408-201ENST00000447784 CABP2Q9NPB3 220 aa16.13■□□□□ 0.17
LINC00408-201ENST00000447784 RXRBP28702 533 aa16.11■□□□□ 0.17
LINC00408-201ENST00000447784 POLR3GLQ9BT43 218 aa16.11■□□□□ 0.17
LINC00408-201ENST00000447784 POLR3AO14802 1390 aaPredicted RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms