RNA–Protein interactions for RNA: ENST00000447726.6

PBX3-207, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene PBX3, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-207ENST00000447726 ABCA9Q8IUA7 1624 aa21.07■□□□□ 0.96
PBX3-207ENST00000447726 MROH2AA6NES4 1674 aa21.07■□□□□ 0.96
PBX3-207ENST00000447726 EFCAB6Q5THR3 1501 aa21.07■□□□□ 0.96
PBX3-207ENST00000447726 KIF1BO60333 1816 aa21.07■□□□□ 0.96
PBX3-207ENST00000447726 BCL2L13Q9BXK5 485 aa21.07■□□□□ 0.96
PBX3-207ENST00000447726 BRPF3Q9ULD4 1205 aa21.07■□□□□ 0.96
PBX3-207ENST00000447726 RLBP1P12271 317 aa21.06■□□□□ 0.96
PBX3-207ENST00000447726 MTHFSP49914 203 aa21.05■□□□□ 0.96
PBX3-207ENST00000447726 NINLQ9Y2I6 1382 aa21.05■□□□□ 0.96
PBX3-207ENST00000447726 PPRC1Q5VV67 1664 aaKnown RBP21.04■□□□□ 0.96
PBX3-207ENST00000447726 PCDHB15Q9Y5E8 787 aa21.04■□□□□ 0.96
PBX3-207ENST00000447726 IFT172Q9UG01 1749 aa21.04■□□□□ 0.96
PBX3-207ENST00000447726 MAPK8IP3Q9UPT6 1336 aa21.04■□□□□ 0.96
PBX3-207ENST00000447726 MYO3AQ8NEV4 1616 aa21.04■□□□□ 0.96
PBX3-207ENST00000447726 PHF23Q9BUL5 403 aaPredicted RBP21.03■□□□□ 0.96
PBX3-207ENST00000447726 SHPRHQ149N8 1683 aa21.03■□□□□ 0.96
PBX3-207ENST00000447726 C14orf93Q9H972 538 aaKnown RBP21.02■□□□□ 0.96
PBX3-207ENST00000447726 IQSEC2Q5JU85 1478 aa21■□□□□ 0.95
PBX3-207ENST00000447726 ADGRB3O60242 1522 aa20.99■□□□□ 0.95
PBX3-207ENST00000447726 WDR63Q8IWG1 891 aa20.99■□□□□ 0.95
PBX3-207ENST00000447726 GGT6Q6P531 493 aa20.99■□□□□ 0.95
PBX3-207ENST00000447726 NUTM2DQ5VT03 806 aaPredicted RBP20.98■□□□□ 0.95
PBX3-207ENST00000447726 SETBP1Q9Y6X0 1596 aa20.98■□□□□ 0.95
PBX3-207ENST00000447726 PMFBP1Q8TBY8 1022 aa20.97■□□□□ 0.95
PBX3-207ENST00000447726 NPATQ14207 1427 aa20.97■□□□□ 0.95
PBX3-207ENST00000447726 KIDINS220Q9ULH0 1771 aa20.97■□□□□ 0.95
PBX3-207ENST00000447726 ANO8Q9HCE9 1232 aaPredicted RBP20.97■□□□□ 0.95
PBX3-207ENST00000447726 CFAP65Q6ZU64 1925 aaKnown RBP20.96■□□□□ 0.95
PBX3-207ENST00000447726 ZNF518AQ6AHZ1 1483 aa20.96■□□□□ 0.95
PBX3-207ENST00000447726 PDZRN3Q9UPQ7 1066 aa20.96■□□□□ 0.95
PBX3-207ENST00000447726 ADGRB1O14514 1584 aa20.96■□□□□ 0.95
PBX3-207ENST00000447726 LMTK2Q8IWU2 1503 aa20.95■□□□□ 0.95
PBX3-207ENST00000447726 CFAP53Q96M91 514 aa20.95■□□□□ 0.94
PBX3-207ENST00000447726 U2AF1L5P0DN76 240 aaPredicted RBP20.95■□□□□ 0.94
PBX3-207ENST00000447726 U2AF1Q01081 240 aaKnown RBP eCLIP20.95■□□□□ 0.94
PBX3-207ENST00000447726 NLRP1Q9C000 1473 aa20.95■□□□□ 0.94
PBX3-207ENST00000447726 ASXL2Q76L83 1435 aa20.95■□□□□ 0.94
PBX3-207ENST00000447726 QRICH2Q9H0J4 1663 aa20.94■□□□□ 0.94
PBX3-207ENST00000447726 CCDC27Q2M243 656 aa20.94■□□□□ 0.94
PBX3-207ENST00000447726 VIRMAQ69YN4 1812 aaKnown RBP20.94■□□□□ 0.94
PBX3-207ENST00000447726 SLKQ9H2G2 1235 aaPredicted RBP20.94■□□□□ 0.94
PBX3-207ENST00000447726 AAMPQ13685 434 aa20.91■□□□□ 0.94
PBX3-207ENST00000447726 BECN1Q14457 450 aa20.91■□□□□ 0.94
PBX3-207ENST00000447726 MYH16Q9H6N6 1097 aa20.91■□□□□ 0.94
PBX3-207ENST00000447726 CABP2Q9NPB3 220 aa20.91■□□□□ 0.94
PBX3-207ENST00000447726 ZC3H13Q5T200 1668 aaKnown RBP20.91■□□□□ 0.94
PBX3-207ENST00000447726 SAFB2Q14151 953 aaKnown RBP eCLIP20.9■□□□□ 0.94
PBX3-207ENST00000447726 TSR2Q969E8 191 aaKnown RBP20.9■□□□□ 0.94
PBX3-207ENST00000447726 SENP3Q9H4L4 574 aaPredicted RBP20.9■□□□□ 0.94
PBX3-207ENST00000447726 RWDD1Q9H446 243 aaPredicted RBP20.89■□□□□ 0.93
PBX3-207ENST00000447726 PPLO60437 1756 aa20.89■□□□□ 0.93
PBX3-207ENST00000447726 EVC2Q86UK5 1308 aa20.89■□□□□ 0.93
PBX3-207ENST00000447726 MVPQ14764 893 aaKnown RBP20.88■□□□□ 0.93
PBX3-207ENST00000447726 TBC1D32Q96NH3 1257 aa20.88■□□□□ 0.93
PBX3-207ENST00000447726 ANKRD36BQ8N2N9 1353 aa20.88■□□□□ 0.93
PBX3-207ENST00000447726 RPGRIP1LQ68CZ1 1315 aa20.87■□□□□ 0.93
PBX3-207ENST00000447726 POGKQ9P215 609 aa20.87■□□□□ 0.93
PBX3-207ENST00000447726 ZKSCAN2Q63HK3 967 aa20.86■□□□□ 0.93
PBX3-207ENST00000447726 UPF2Q9HAU5 1272 aaKnown RBP20.86■□□□□ 0.93
PBX3-207ENST00000447726 FTSJ3Q8IY81 847 aaKnown RBP20.85■□□□□ 0.93
PBX3-207ENST00000447726 TULP4Q9NRJ4 1543 aa20.85■□□□□ 0.93
PBX3-207ENST00000447726 USP32Q8NFA0 1604 aa20.85■□□□□ 0.93
PBX3-207ENST00000447726 DZIP1LQ8IYY4 767 aaKnown RBP20.85■□□□□ 0.93
PBX3-207ENST00000447726 ANTXR1Q9H6X2 564 aa20.85■□□□□ 0.93
PBX3-207ENST00000447726 TBC1D2Q9BYX2 928 aa20.85■□□□□ 0.93
PBX3-207ENST00000447726 FRMPD1Q5SYB0 1578 aa20.84■□□□□ 0.93
PBX3-207ENST00000447726 U2SURPO15042 1029 aaKnown RBP20.84■□□□□ 0.93
PBX3-207ENST00000447726 EXOSC9Q06265 439 aaKnown RBP20.84■□□□□ 0.93
PBX3-207ENST00000447726 GGNBP2Q9H3C7 697 aa20.83■□□□□ 0.93
PBX3-207ENST00000447726 SMC4Q9NTJ3 1288 aa20.83■□□□□ 0.92
PBX3-207ENST00000447726 GLI2P10070 1586 aa20.83■□□□□ 0.92
PBX3-207ENST00000447726 PUS7Q96PZ0 661 aaKnown RBP20.82■□□□□ 0.92
PBX3-207ENST00000447726 NSD2O96028 1365 aa20.82■□□□□ 0.92
PBX3-207ENST00000447726 PLEKHF1Q96S99 279 aa20.82■□□□□ 0.92
PBX3-207ENST00000447726 VGFO15240 615 aaPredicted RBP20.81■□□□□ 0.92
PBX3-207ENST00000447726 TRIM27P14373 513 aa20.81■□□□□ 0.92
PBX3-207ENST00000447726 NCBP3Q53F19 620 aaKnown RBP20.81■□□□□ 0.92
PBX3-207ENST00000447726 STK26Q9P289 416 aa20.81■□□□□ 0.92
PBX3-207ENST00000447726 ZMYM3Q14202 1370 aa20.81■□□□□ 0.92
PBX3-207ENST00000447726 CD109Q6YHK3 1445 aa20.81■□□□□ 0.92
PBX3-207ENST00000447726 TMPOP42166 694 aaKnown RBP20.81■□□□□ 0.92
PBX3-207ENST00000447726 SSH1Q8WYL5 1049 aa20.8■□□□□ 0.92
PBX3-207ENST00000447726 TRIM35Q9UPQ4 493 aa20.8■□□□□ 0.92
PBX3-207ENST00000447726 POGZQ7Z3K3 1410 aa20.8■□□□□ 0.92
PBX3-207ENST00000447726 A0A1W2PP64 1363 aa20.8■□□□□ 0.92
PBX3-207ENST00000447726 ABCC3O15438 1527 aa20.79■□□□□ 0.92
PBX3-207ENST00000447726 SPRYD3Q8NCJ5 442 aa20.79■□□□□ 0.92
PBX3-207ENST00000447726 SRPK2P78362 688 aaKnown RBP20.79■□□□□ 0.92
PBX3-207ENST00000447726 ADGRB2O60241 1585 aa20.78■□□□□ 0.92
PBX3-207ENST00000447726 ITPRIPQ8IWB1 547 aa20.78■□□□□ 0.92
PBX3-207ENST00000447726 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.78■□□□□ 0.92
PBX3-207ENST00000447726 MLH3Q9UHC1 1453 aa20.78■□□□□ 0.92
PBX3-207ENST00000447726 CT47B1P0C2W7 299 aaPredicted RBP20.77■□□□□ 0.92
PBX3-207ENST00000447726 ARHGEF28Q8N1W1 1705 aaKnown RBP20.77■□□□□ 0.91
PBX3-207ENST00000447726 HECW2Q9P2P5 1572 aa20.77■□□□□ 0.91
PBX3-207ENST00000447726 ABCC11Q96J66 1382 aa20.76■□□□□ 0.91
PBX3-207ENST00000447726 IDI1Q13907 227 aa20.76■□□□□ 0.91
PBX3-207ENST00000447726 NOB1Q9ULX3 412 aaKnown RBP20.76■□□□□ 0.91
PBX3-207ENST00000447726 MFAP1P55081 439 aaKnown RBP20.75■□□□□ 0.91
PBX3-207ENST00000447726 RAPGEF3O95398 923 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms