RNA–Protein interactions for RNA: ENST00000447261.6

BCRP3-201, Transcript of breakpoint cluster region pseudogene 3, humanhuman

TSL 2

Gene BCRP3, Length 1,457 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCRP3-201ENST00000447261 NUTM2EB1AL46 878 aaPredicted RBP22.96■■□□□ 1.27
BCRP3-201ENST00000447261 NEUROD1Q13562 356 aa22.96■■□□□ 1.27
BCRP3-201ENST00000447261 NUTM2AQ8IVF1 878 aaPredicted RBP22.96■■□□□ 1.27
BCRP3-201ENST00000447261 TMEM132EQ6IEE7 984 aa22.94■■□□□ 1.26
BCRP3-201ENST00000447261 LRRC59Q96AG4 307 aaKnown RBP22.93■■□□□ 1.26
BCRP3-201ENST00000447261 PIK3C2GO75747 1445 aa22.92■■□□□ 1.26
BCRP3-201ENST00000447261 ORAI2Q96SN7 254 aa22.92■■□□□ 1.26
BCRP3-201ENST00000447261 WAPLQ7Z5K2 1190 aa22.92■■□□□ 1.26
BCRP3-201ENST00000447261 LRPPRCP42704 1394 aaKnown RBP22.91■■□□□ 1.26
BCRP3-201ENST00000447261 TONSLQ96HA7 1378 aa22.9■■□□□ 1.26
BCRP3-201ENST00000447261 TECPR2O15040 1411 aa22.88■■□□□ 1.25
BCRP3-201ENST00000447261 ZNF772Q68DY9 489 aaPredicted RBP22.87■■□□□ 1.25
BCRP3-201ENST00000447261 ABCC11Q96J66 1382 aa22.87■■□□□ 1.25
BCRP3-201ENST00000447261 YTHDC2Q9H6S0 1430 aaKnown RBP22.86■■□□□ 1.25
BCRP3-201ENST00000447261 CDC42BPGQ6DT37 1551 aa22.86■■□□□ 1.25
BCRP3-201ENST00000447261 KNDC1Q76NI1 1749 aa22.86■■□□□ 1.25
BCRP3-201ENST00000447261 PNPLA6Q8IY17 1366 aa22.86■■□□□ 1.25
BCRP3-201ENST00000447261 PLEKHH1Q9ULM0 1364 aa22.86■■□□□ 1.25
BCRP3-201ENST00000447261 ESCO1Q5FWF5 840 aa22.85■■□□□ 1.25
BCRP3-201ENST00000447261 NUTM2FA1L443 756 aa22.85■■□□□ 1.25
BCRP3-201ENST00000447261 CFAP70Q5T0N1 1121 aa22.85■■□□□ 1.25
BCRP3-201ENST00000447261 C14orf93Q9H972 538 aaKnown RBP22.85■■□□□ 1.25
BCRP3-201ENST00000447261 MYOM2P54296 1465 aa22.84■■□□□ 1.25
BCRP3-201ENST00000447261 NRXN1Q9ULB1 1477 aa22.83■■□□□ 1.24
BCRP3-201ENST00000447261 LAMC1P11047 1609 aa22.82■■□□□ 1.24
BCRP3-201ENST00000447261 SOS2Q07890 1332 aaPredicted RBP22.82■■□□□ 1.24
BCRP3-201ENST00000447261 AFF2P51816 1311 aa22.81■■□□□ 1.24
BCRP3-201ENST00000447261 C8orf37Q96NL8 207 aa22.8■■□□□ 1.24
BCRP3-201ENST00000447261 DIEXFQ68CQ4 756 aaKnown RBP22.79■■□□□ 1.24
BCRP3-201ENST00000447261 KDM2AQ9Y2K7 1162 aa22.79■■□□□ 1.24
BCRP3-201ENST00000447261 ADAMTS2O95450 1211 aa22.79■■□□□ 1.24
BCRP3-201ENST00000447261 NPHP3Q7Z494 1330 aa22.78■■□□□ 1.24
BCRP3-201ENST00000447261 FOXO3O43524 673 aa22.78■■□□□ 1.24
BCRP3-201ENST00000447261 XPCQ01831 940 aaPredicted RBP22.78■■□□□ 1.24
BCRP3-201ENST00000447261 SAFB2Q14151 953 aaKnown RBP eCLIP22.77■■□□□ 1.24
BCRP3-201ENST00000447261 DCAF11Q8TEB1 546 aa22.77■■□□□ 1.24
BCRP3-201ENST00000447261 SIRT1Q96EB6 747 aa22.76■■□□□ 1.23
BCRP3-201ENST00000447261 RXRBP28702 533 aa22.75■■□□□ 1.23
BCRP3-201ENST00000447261 PRAM1Q96QH2 718 aa22.75■■□□□ 1.23
BCRP3-201ENST00000447261 FMN2Q9NZ56 1722 aa22.75■■□□□ 1.23
BCRP3-201ENST00000447261 NGLY1Q96IV0 654 aa22.73■■□□□ 1.23
BCRP3-201ENST00000447261 POGKQ9P215 609 aa22.73■■□□□ 1.23
BCRP3-201ENST00000447261 PXDNQ92626 1479 aa22.72■■□□□ 1.23
BCRP3-201ENST00000447261 TRAK1Q9UPV9 953 aa22.7■■□□□ 1.22
BCRP3-201ENST00000447261 QTRT2Q9H974 415 aaKnown RBP22.69■■□□□ 1.22
BCRP3-201ENST00000447261 COL22A1Q8NFW1 1626 aaPredicted RBP22.68■■□□□ 1.22
BCRP3-201ENST00000447261 ADGRB1O14514 1584 aa22.68■■□□□ 1.22
BCRP3-201ENST00000447261 DLC1Q96QB1 1528 aa22.68■■□□□ 1.22
BCRP3-201ENST00000447261 RGPD8O14715 1765 aaPredicted RBP22.68■■□□□ 1.22
BCRP3-201ENST00000447261 KIF1AQ12756 1690 aa22.67■■□□□ 1.22
BCRP3-201ENST00000447261 L3MBTL2Q969R5 705 aa22.66■■□□□ 1.22
BCRP3-201ENST00000447261 STAC3Q96MF2 364 aa22.66■■□□□ 1.22
BCRP3-201ENST00000447261 PHF8Q9UPP1 1060 aa22.66■■□□□ 1.22
BCRP3-201ENST00000447261 KRT28Q7Z3Y7 464 aa22.65■■□□□ 1.22
BCRP3-201ENST00000447261 RBM6P78332 1123 aaKnown RBP22.64■■□□□ 1.21
BCRP3-201ENST00000447261 HIRIP3Q9BW71 556 aaPredicted RBP22.64■■□□□ 1.21
BCRP3-201ENST00000447261 USP21Q9UK80 565 aa22.64■■□□□ 1.21
BCRP3-201ENST00000447261 CDK12Q9NYV4 1490 aaPredicted RBP22.63■■□□□ 1.21
BCRP3-201ENST00000447261 MINK1Q8N4C8 1332 aaPredicted RBP22.62■■□□□ 1.21
BCRP3-201ENST00000447261 SPATA31A3Q5VYP0 1347 aa22.62■■□□□ 1.21
BCRP3-201ENST00000447261 PSME1Q06323 249 aa22.6■■□□□ 1.21
BCRP3-201ENST00000447261 FNBP4Q8N3X1 1017 aaPredicted RBP22.6■■□□□ 1.21
BCRP3-201ENST00000447261 PMFBP1Q8TBY8 1022 aa22.6■■□□□ 1.21
BCRP3-201ENST00000447261 ADGRB2O60241 1585 aa22.59■■□□□ 1.21
BCRP3-201ENST00000447261 PLEKHG5O94827 1062 aa22.59■■□□□ 1.21
BCRP3-201ENST00000447261 TRPC5Q9UL62 973 aaPredicted RBP22.59■■□□□ 1.21
BCRP3-201ENST00000447261 RGS12O14924 1447 aa22.58■■□□□ 1.21
BCRP3-201ENST00000447261 ANKARQ7Z5J8 1434 aa22.58■■□□□ 1.2
BCRP3-201ENST00000447261 MARF1Q9Y4F3 1742 aaKnown RBP22.57■■□□□ 1.2
BCRP3-201ENST00000447261 USP32Q8NFA0 1604 aa22.57■■□□□ 1.2
BCRP3-201ENST00000447261 LMOD2Q6P5Q4 547 aa22.57■■□□□ 1.2
BCRP3-201ENST00000447261 UPF1Q92900 1129 aaKnown RBP eCLIP22.57■■□□□ 1.2
BCRP3-201ENST00000447261 HAP1P54257 671 aaPredicted RBP22.56■■□□□ 1.2
BCRP3-201ENST00000447261 TNS3Q68CZ2 1445 aa22.56■■□□□ 1.2
BCRP3-201ENST00000447261 EIF3AQ14152 1382 aaKnown RBP22.55■■□□□ 1.2
BCRP3-201ENST00000447261 WASLO00401 505 aaPredicted RBP22.54■■□□□ 1.2
BCRP3-201ENST00000447261 ARHGEF28Q8N1W1 1705 aaKnown RBP22.53■■□□□ 1.2
BCRP3-201ENST00000447261 ATRNO75882 1429 aa22.53■■□□□ 1.2
BCRP3-201ENST00000447261 SBNO1A3KN83 1393 aa22.52■■□□□ 1.2
BCRP3-201ENST00000447261 TULP4Q9NRJ4 1543 aa22.52■■□□□ 1.2
BCRP3-201ENST00000447261 CABLES1Q8TDN4 633 aa22.52■■□□□ 1.2
BCRP3-201ENST00000447261 PRR36Q9H6K5 1346 aa22.52■■□□□ 1.2
BCRP3-201ENST00000447261 BCL9LQ86UU0 1499 aa22.51■■□□□ 1.19
BCRP3-201ENST00000447261 ARHGEF10O15013 1369 aa22.5■■□□□ 1.19
BCRP3-201ENST00000447261 GPRASP1Q5JY77 1395 aa22.48■■□□□ 1.19
BCRP3-201ENST00000447261 KIAA1210Q9ULL0 1709 aa22.48■■□□□ 1.19
BCRP3-201ENST00000447261 NBPF1Q3BBV0 1214 aa22.47■■□□□ 1.19
BCRP3-201ENST00000447261 NGDNQ8NEJ9 315 aaKnown RBP22.47■■□□□ 1.19
BCRP3-201ENST00000447261 NBPF8Q3BBV2 869 aa22.46■■□□□ 1.19
BCRP3-201ENST00000447261 UNC5CLQ8IV45 518 aa22.46■■□□□ 1.19
BCRP3-201ENST00000447261 NUDT16Q96DE0 195 aaKnown RBP22.45■■□□□ 1.18
BCRP3-201ENST00000447261 GJD4Q96KN9 370 aaPredicted RBP22.45■■□□□ 1.18
BCRP3-201ENST00000447261 PAK3O75914 559 aaPredicted RBP22.44■■□□□ 1.18
BCRP3-201ENST00000447261 EIF4G2P78344 907 aaKnown RBP eCLIP22.44■■□□□ 1.185e-7■■■■■ 59.8
BCRP3-201ENST00000447261 CDK19Q9BWU1 502 aa22.44■■□□□ 1.18
BCRP3-201ENST00000447261 SLIT2O94813 1529 aa22.44■■□□□ 1.18
BCRP3-201ENST00000447261 TRPM3Q9HCF6 1732 aaPredicted RBP22.44■■□□□ 1.18
BCRP3-201ENST00000447261 ABCA3Q99758 1704 aa22.43■■□□□ 1.18
BCRP3-201ENST00000447261 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.43■■□□□ 1.18
BCRP3-201ENST00000447261 ITSN1Q15811 1721 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms